August 2009 - macports-tickets - lists.macosforge.org

[MacPorts] #20699: shogun 0.8 is out
by MacPorts 25 Aug '09

25 Aug '09

#20699: shogun 0.8 is out -------------------------------------------+-------------------------------- Reporter: rike.schuppner@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: | Port: shogun -------------------------------------------+-------------------------------- -- Ticket URL: <http://trac.macports.org/ticket/20699> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #18851: enblend 3.0 fails to build / glut-related
by MacPorts 25 Aug '09

25 Aug '09

#18851: enblend 3.0 fails to build / glut-related ----------------------------------+----------------------------------------- Reporter: michael@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Port Bugs Component: ports | Version: 1.7.0 Keywords: | Port: enblend ----------------------------------+----------------------------------------- Hello everyone, For some while now I can't build the enblend port. Today I have updated my Macports tree and updated all installed ports, but enblend still fails to build with glut.h-related messages. The system is MacOSX 10.5.6 and Macports 1.7 The Portfile for enblend is: # $Id: Portfile 47383 2009-02-27 20:59:18Z jeremyhu(a)macports.org $ $ port outdated No installed ports are outdated. $ port clean --all enblend $ port -dcuv install enblend --> See attached Transscript. -- Ticket URL: <http://trac.macports.org/ticket/18851> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 5

[MacPorts] #20771: git-core: Update to version 1.6.4.1
by MacPorts 25 Aug '09

25 Aug '09

#20771: git-core: Update to version 1.6.4.1 --------------------------------+------------------------------------------- Reporter: maccheck@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: Portfile patch | Port: git-core --------------------------------+------------------------------------------- new version of Git available -- Ticket URL: <http://trac.macports.org/ticket/20771> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #20332: pcre++-0.9.5 doesn't respect DESTDIR in doc/ and doesn't install to share/doc
by MacPorts 25 Aug '09

25 Aug '09

#20332: pcre++-0.9.5 doesn't respect DESTDIR in doc/ and doesn't install to share/doc ------------------------------+--------------------------------------------- Reporter: blb@… | Owner: gwright@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.8.0 Keywords: | Port: pcre++ ------------------------------+--------------------------------------------- The Makefile generated in doc doesn't install the docs into a DESTDIR- prefixed path so it tries to go straight to ${prefix} during destroot. It also wants to install to ${prefix}/doc instead of ${prefix}/share/doc. Attaching a patch to fix this. -- Ticket URL: <http://trac.macports.org/ticket/20332> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #20791: petsc: Could not locate MPIEXEC
by MacPorts 25 Aug '09

25 Aug '09

#20791: petsc: Could not locate MPIEXEC -------------------------------------+-------------------------------------- Reporter: ryandesign@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: | Port: petsc -------------------------------------+-------------------------------------- I'm having trouble configuring petsc (on Mac OS X 10.4.11 Intel): {{{ ---> Fetching petsc ---> Attempting to fetch petsc-lite-3.0.0-p7.tar.gz from http://distfiles.macports.org/petsc ---> Verifying checksum(s) for petsc ---> Extracting petsc ---> Configuring petsc Error: Target org.macports.configure returned: configure failure: shell command " cd "/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7" && /mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/configure.py --prefix=/mp --with-python --with-debugging=0 --with-c-support=1 --with-c++-support=1 --with-pic=fPIC --prefix=/mp/lib/petsc --with- cc=/mp/bin/openmpicc --with-cxx=/mp/bin/openmpicxx --with- fc=/mp/bin/openmpif90 " returned error 1 Command output: TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: checkMath from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:201) TESTING: checkMathErf from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:217) TESTING: checkDynamic from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:226) TESTING: configureTimers from PETSc.utilities.timer(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/PETSc/utilities/timer.py:35) TESTING: configureLibrary from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:680) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: check from config.libraries(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/libraries.py:126) TESTING: checkInclude from config.headers(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/headers.py:63) TESTING: configureConversion from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:186) TESTING: configureMPI2 from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:170) TESTING: configureTypes from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:206) TESTING: configureMPITypes from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:217) TESTING: configureMissingPrototypes from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:274) TESTING: SGIMPICheck from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:589) TESTING: CxxMPICheck from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:599) TESTING: FortranMPICheck from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:618) TESTING: configureIO from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:643) TESTING: checkSharedLibrary from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:123) TESTING: configureMPIEXEC from config.packages.MPI(/mp/var/macports/build/_Users_rschmidt_macports_dports_math_petsc/work/petsc-3.0.0-p7/config/BuildSystem/config/packages/MPI.py:135) ********************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): --------------------------------------------------------------------------------------- Could not locate MPIEXEC - please specify --with-mpiexec option ********************************************************************************* Error: The following dependencies failed to build: petsc Error: Status 1 encountered during processing. }}} -- Ticket URL: <http://trac.macports.org/ticket/20791> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #20802: fugu +universal fails destroot
by MacPorts 25 Aug '09

25 Aug '09

#20802: fugu +universal fails destroot -------------------------------------+-------------------------------------- Reporter: ryandesign@… | Owner: ryandesign@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: | Port: fugu -------------------------------------+-------------------------------------- fugu +destroot doesn't get through the destroot stage. On Mac OS X 10.5.8 Intel: {{{ $ sudo port install +universal ---> Fetching fugu ---> Attempting to fetch fugu-1.2.0.tgz from http://seven.local/distfiles/fugu ---> Verifying checksum(s) for fugu ---> Extracting fugu ---> Configuring fugu ---> Building fugu ---> Staging fugu into destroot Error: Target org.macports.destroot returned: shell command "cd "/mp/var/macports/build/_Users_rschmidt_macports_dports_aqua_fugu/work/fugu-1.2.0" && xcodebuild -alltargets -configuration Deployment {ARCHS="i386 ppc"} INSTALL_PATH=/Applications/mp OBJROOT=build/ SYMROOT=build/ MACOSX_DEPLOYMENT_TARGET=10.5 ARCHS="i386 ppc" SDKROOT= SKIP_INSTALL=yes DSTROOT="/mp/var/macports/build/_Users_rschmidt_macports_dports_aqua_fugu/work/destroot"" returned error 1 Command output: Build setting '{ARCHS' does not have a valid base name Error: Status 1 encountered during processing. }}} On Mac OS X 10.4.11 Intel: {{{ $ sudo port install +universal ---> Fetching fugu ---> Verifying checksum(s) for fugu ---> Extracting fugu ---> Configuring fugu ---> Building fugu ---> Staging fugu into destroot Error: Target org.macports.destroot returned: error copying "/mp/var/macports/build/_Users_rschmidt_macports_dports- clean_aqua_fugu/work/fugu-1.2.0/build/UninstalledProducts/Fugu.app": no such file or directory Error: Status 1 encountered during processing. }}} {{{ $ ls -l work/fugu-1.2.0/build/ total 16 drwxr-xr-x 4 root rschmidt 136 Aug 25 00:32 Deployment lrwxr-xr-x 1 root rschmidt 112 Aug 25 00:32 Fugu.app -> /mp/var/macports/build/_Users_rschmidt_macports_dports- clean_aqua_fugu/work/fugu-1.2.0/build/Deployment/Fugu.app drwxr-xr-x 3 root rschmidt 102 Aug 25 00:32 Fugu.build lrwxr-xr-x 1 root rschmidt 118 Aug 25 00:32 externaleditor -> /mp/var/macports/build/_Users_rschmidt_macports_dports- clean_aqua_fugu/work/fugu-1.2.0/build/Deployment/externaleditor }}} The regular non-universal build works for me on both systems. -- Ticket URL: <http://trac.macports.org/ticket/20802> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #20801: Pallet crashes on launch
by MacPorts 25 Aug '09

25 Aug '09

#20801: Pallet crashes on launch -------------------------------------+-------------------------------------- Reporter: ryandesign@… | Owner: juanger@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: | Port: -------------------------------------+-------------------------------------- I just tried Pallet for the first time in a long time using this dmg: https://trac.macports.org/export/56163/users/juanger/Pallet.dmg It crashed immediately after double-clicking. The crash log is attached. This is what the crash reporter dialog said: {{{ 2009-08-24 18:50:40 -0500 EXC_BAD_ACCESS (0x0001) KERN_PROTECTION_FAILURE (0x0002) at 0x00000000 Thread 0 Crashed: 0 _malloc_initialize + 992 1 malloc + 29 2 _NSAPDataCreate + 26 3 NSPushAutoreleasePool + 37 4 NSApplicationMain + 62 5 start + 54 }}} I'm on Mac OS X 10.4.11 Intel. MacPorts 1.7.1 is installed in /mp. -- Ticket URL: <http://trac.macports.org/ticket/20801> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #19896: Error running webkit-gtk 1.1.7 on Leopard
by MacPorts 25 Aug '09

25 Aug '09

#19896: Error running webkit-gtk 1.1.7 on Leopard -----------------------------------+---------------------------------------- Reporter: nodamage@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: | Port: webkit-gtk -----------------------------------+---------------------------------------- Ran into the following error trying to run pywebkitgtk: {{{ Traceback (most recent call last): File "demos/tabbed_browser.py", line 30, in <module> import webkit ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5 /site-packages/gtk-2.0/webkit.so, 2): Symbol not found: __ZN7WebCore15PurgeableBuffer13makePurgeableEb Referenced from: /opt/local/lib/libwebkit-1.0.2.dylib Expected in: dynamic lookup }}} Traced it down to the following webkit ticket: https://bugs.webkit.org/show_bug.cgi?id=23057 Applying the patch to webkit-gtk and recompiling it fixed my problem and allowed pywebkit-gtk to work successfully. I suspect other apps using webkit-gtk may suffer from the same problem. System: OS X 10.5.7 Intel with Xcode 3.1.2. webkit-gtk installed was the latest Portfile (currently r51558). Attaching the patch from the specified webkit ticket that I was able to apply to resolve the problem. -- Ticket URL: <http://trac.macports.org/ticket/19896> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 4

[MacPorts] #20800: biopython 1.51 does not depend on mx
by MacPorts 24 Aug '09

24 Aug '09

#20800: biopython 1.51 does not depend on mx ---------------------------------------------+------------------------------ Reporter: biopython@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.7.1 Keywords: Biopython mx mxTextTools | Port: py25-biopython ---------------------------------------------+------------------------------ Biopython 1.51 does not depend on mxTextTools (although older versions of Biopython did). The dependency on port:py-mx should therefore be removed from packages py25-biopython AND py26-biopython. See: http://news.open-bio.org/news/2009/08/biopython-1-51-released/ Thanks! -- Ticket URL: <http://trac.macports.org/ticket/20800> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 2

[MacPorts] #20782: update grep to 2.5.4
by MacPorts 24 Aug '09

24 Aug '09

#20782: update grep to 2.5.4 ------------------------------+--------------------------------------------- Reporter: jmr@… | Owner: waqar@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: haspatch | Port: grep ------------------------------+--------------------------------------------- See attachment. -- Ticket URL: <http://trac.macports.org/ticket/20782> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 1