May 2014 - macports-tickets - lists.macosforge.org

[MacPorts] #39598: webkit-gtk: Symbol not found: __cg_jpeg_resync_to_restart
by MacPorts 06 Jun '14

06 Jun '14

#39598: webkit-gtk: Symbol not found: __cg_jpeg_resync_to_restart --------------------+-------------------------------- Reporter: drs@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: webkit-gtk --------------------+-------------------------------- My os/architecture information is: Darwin XX.local 12.3.0 Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64 x86_64 When attempting to upgrade via 'port upgrade outdated', I find that upgrading webkit-gtk to 2.0.3 fails with: :info:build clang: warning: argument unused during compilation: '-pthread' :info:build dyld: Symbol not found: __cg_jpeg_resync_to_restart :info:build Referenced from: /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO :info:build Expected in: /opt/local/lib/libjpeg.9.dylib :info:build in /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO I find that reverting to "webkit-gtk @2.0.1_0+quartz+video" resolves the issue. No other changes were made to environment or macports state other than moving the Portfile for webkit-gtk back to the 2.0.1_0 version with the dependency updated to 'port:harfbuzz-icu'. Note that neither DYLD_LIBRARY_PATH nor DYLD_FALLBACK_LIBRARY_PATH is present in my environment. I will attach the build log and the modified Portfile. -- Ticket URL: <https://trac.macports.org/ticket/39598> MacPorts <http://www.macports.org/> Ports system for OS X

1 95

[MacPorts] #39580: Failed Installation of Octave - Please help me
by MacPorts 06 Jun '14

06 Jun '14

#39580: Failed Installation of Octave - Please help me -------------------------------------------------+------------------------- Reporter: edhem.bajric@… | Owner: macports- Type: defect | tickets@… Priority: Normal | Status: new Component: ports | Milestone: Keywords: octave, arpack, failed installation | Version: 2.1.3 | Port: arpack, | octave -------------------------------------------------+------------------------- Dear madam, dear sir Recently, I tried to install octave via macports in order to prepare myself for a new job. The installation failed and I don't know why. Please halp me to fix this. I'd be very grateful. Thanks a lot in advance. The code and the log-file can be found below. Yours sincerely Edhem Bajric Edhem-Bajrics-MacBook:~ Edo$ sudo port install -y octave ---> Computing dependencies for octave ---> Dependencies to be installed: GraphicsMagick SuiteSparse arpack openmpi gcc47 cctools cloog isl gcc_select libmpc libstdcxx ppl glpk atlas fftw-3-single ftgl hdf5-18 metis qhull qrupdate For GraphicsMagick: skipping org.macports.main (dry run) For SuiteSparse: skipping org.macports.main (dry run) For cctools: skipping org.macports.main (dry run) For isl: skipping org.macports.main (dry run) For cloog: skipping org.macports.main (dry run) For gcc_select: skipping org.macports.main (dry run) For libmpc: skipping org.macports.main (dry run) For glpk: skipping org.macports.main (dry run) For ppl: skipping org.macports.main (dry run) For libstdcxx: skipping org.macports.main (dry run) For gcc47: skipping org.macports.main (dry run) For openmpi: skipping org.macports.main (dry run) For arpack: skipping org.macports.main (dry run) For atlas: skipping org.macports.main (dry run) For fftw-3-single: skipping org.macports.main (dry run) For ftgl: skipping org.macports.main (dry run) For hdf5-18: skipping org.macports.main (dry run) For metis: skipping org.macports.main (dry run) For qhull: skipping org.macports.main (dry run) For qrupdate: skipping org.macports.main (dry run) For octave: skipping org.macports.main (dry run) ---> Scanning binaries for linking errors: 100.0% ---> No broken files found. Edhem-Bajrics-MacBook:~ Edo$ sudo port install -s octave Password: ---> Computing dependencies for octave ---> Dependencies to be installed: GraphicsMagick SuiteSparse arpack openmpi gcc47 cctools cloog isl gcc_select libmpc libstdcxx ppl glpk atlas fftw-3-single ftgl hdf5-18 metis qhull qrupdate ---> Fetching distfiles for GraphicsMagick ---> Verifying checksum(s) for GraphicsMagick ---> Extracting GraphicsMagick ---> Configuring GraphicsMagick ---> Building GraphicsMagick ---> Staging GraphicsMagick into destroot ---> Installing GraphicsMagick @1.3.18_0+q8 ---> Activating GraphicsMagick @1.3.18_0+q8 ---> Cleaning GraphicsMagick ---> Fetching distfiles for SuiteSparse ---> Verifying checksum(s) for SuiteSparse ---> Extracting SuiteSparse ---> Applying patches to SuiteSparse ---> Configuring SuiteSparse ---> Building SuiteSparse ---> Staging SuiteSparse into destroot ---> Installing SuiteSparse @4.1.0_0 ---> Activating SuiteSparse @4.1.0_0 ---> Cleaning SuiteSparse ---> Fetching distfiles for cctools ---> Verifying checksum(s) for cctools ---> Extracting cctools ---> Applying patches to cctools ---> Configuring cctools ---> Building cctools ---> Staging cctools into destroot ---> Installing cctools @839_0+llvm32 ---> Activating cctools @839_0+llvm32 ---> Cleaning cctools ---> Fetching distfiles for isl ---> Verifying checksum(s) for isl ---> Extracting isl ---> Applying patches to isl ---> Configuring isl ---> Building isl ---> Staging isl into destroot ---> Installing isl @0.10_1 ---> Activating isl @0.10_1 ---> Cleaning isl ---> Fetching distfiles for cloog ---> Verifying checksum(s) for cloog ---> Extracting cloog ---> Applying patches to cloog ---> Configuring cloog ---> Building cloog ---> Staging cloog into destroot ---> Installing cloog @0.17.0_1 ---> Activating cloog @0.17.0_1 ---> Cleaning cloog ---> Fetching distfiles for gcc_select ---> Verifying checksum(s) for gcc_select ---> Extracting gcc_select ---> Configuring gcc_select ---> Building gcc_select ---> Staging gcc_select into destroot ---> Installing gcc_select @0.1_8 ---> Activating gcc_select @0.1_8 ---> Cleaning gcc_select ---> Fetching distfiles for libmpc ---> Verifying checksum(s) for libmpc ---> Extracting libmpc ---> Configuring libmpc ---> Building libmpc ---> Staging libmpc into destroot ---> Installing libmpc @1.0.1_0 ---> Activating libmpc @1.0.1_0 ---> Cleaning libmpc ---> Fetching distfiles for glpk ---> Verifying checksum(s) for glpk ---> Extracting glpk ---> Configuring glpk ---> Building glpk ---> Staging glpk into destroot ---> Installing glpk @4.48_0 ---> Activating glpk @4.48_0 ---> Cleaning glpk ---> Fetching distfiles for ppl ---> Verifying checksum(s) for ppl ---> Extracting ppl ---> Configuring ppl ---> Building ppl ---> Staging ppl into destroot ---> Installing ppl @1.0_1 ---> Activating ppl @1.0_1 ---> Cleaning ppl ---> Fetching distfiles for libstdcxx ---> Verifying checksum(s) for libstdcxx ---> Extracting libstdcxx ---> Applying patches to libstdcxx ---> Configuring libstdcxx ---> Building libstdcxx ---> Staging libstdcxx into destroot ---> Installing libstdcxx @4.8.1_0 ---> Activating libstdcxx @4.8.1_0 ---> Cleaning libstdcxx ---> Fetching distfiles for gcc47 ---> Verifying checksum(s) for gcc47 ---> Extracting gcc47 ---> Applying patches to gcc47 ---> Configuring gcc47 ---> Building gcc47 ---> Staging gcc47 into destroot ---> Installing gcc47 @4.7.3_0 ---> Activating gcc47 @4.7.3_0 ---> Cleaning gcc47 ---> Fetching distfiles for openmpi ---> Verifying checksum(s) for openmpi ---> Extracting openmpi ---> Configuring openmpi ---> Building openmpi ---> Staging openmpi into destroot ---> Installing openmpi @1.7.1_0+gcc47 ---> Activating openmpi @1.7.1_0+gcc47 ---> Cleaning openmpi ---> Configuring arpack Error: org.macports.configure for port arpack returned: configure failure: command execution failed Error: Failed to install arpack Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/main.log Error: The following dependencies were not installed: arpack atlas fftw-3-single ftgl hdf5-18 metis qhull qrupdate To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port octave failed Edhem-Bajrics-MacBook:~ Edo$ cp /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/main.log ~/Desktop/ -- Ticket URL: <https://trac.macports.org/ticket/39580> MacPorts <http://www.macports.org/> Ports system for OS X

1 8

[MacPorts] #16110: libxml2: attempts to use libxslt.1.dylib
by MacPorts 06 Jun '14

06 Jun '14

#16110: libxml2: attempts to use libxslt.1.dylib -------------------------------------+-------------------------------------- Reporter: ryandesign(a)macports.org | Owner: cedric.luthi(a)gmail.com Type: defect | Status: new Priority: Normal | Milestone: Port Bugs Component: ports | Version: 1.7.0 Keywords: | -------------------------------------+-------------------------------------- I previously had libxml2 2.6.32_1 and libxslt 1.1.23_0 installed. I forcibly uninstalled libxml2 and reinstalled it, to test an issue. During the reinstall, this message appeared in the debug output, and also a Mac OS X Crash Reporter dialog appeared with similar information: {{{ dyld: lazy symbol binding failed: Symbol not found: _xmlXPathContextSetCache Referenced from: /mp/lib/libxslt.1.dylib Expected in: flat namespace dyld: Symbol not found: _xmlXPathContextSetCache Referenced from: /mp/lib/libxslt.1.dylib Expected in: flat namespace }}} `/mp` is my MacPorts prefix. So it seems that libxml2 is trying to load libxslt.1.dylib during the build. You must modify the port so that this does not happen, because libxml2 does not declare a dependency on libxslt (and it cannot, since libxslt declares a dependency on libxml2, and we cannot have circular dependencies). I am running Mac OS X 10.4.11 on an Intel Mac with Xcode 2.5 and MacPorts from trunk @38557. -- Ticket URL: <http://trac.macports.org/ticket/16110> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 3

[MacPorts] #39476: arpack's openmpi variant conflicts with gcc45
by MacPorts 06 Jun '14

06 Jun '14

#39476: arpack's openmpi variant conflicts with gcc45 --------------------+--------------------- Reporter: mk@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: arpack --------------------+--------------------- How to recover from this: {{{ The following installed ports are outdated: arpack 3.1.2_1 < 3.1.3_0 gconf 2.28.1_5 < 2.32.4_0 ImageMagick 6.8.5-5_0 < 6.8.6-0_0 poppler 0.22.4_1 < 0.22.5_0 py27-pyobjc-cocoa 2.4_0 < 2.5.1_0 py27-setuptools 0.7.2_0 < 0.7.4_0 Error: arpack: Variant openmpi conflicts with gcc45 Error: Unable to open port: Error evaluating variants To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets }}} ??? -- Ticket URL: <https://trac.macports.org/ticket/39476> MacPorts <http://www.macports.org/> Ports system for OS X

1 67

[MacPorts] #42796: gdb-apple @1824: build failure due to texinfo5
by MacPorts 06 Jun '14

06 Jun '14

#42796: gdb-apple @1824: build failure due to texinfo5 ---------------------+-------------------------------- Reporter: egall@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: gdb-apple ---------------------+-------------------------------- The error looks like this: {{{ ./elf.texi:1: warning: @section missing argument bfd.texinfo:335: unknown command `colophon' bfd.texinfo:346: unknown command `cygnus' ./bfdt.texi:313: raising the section level of @subsubsection which is too low ./init.texi:5: raising the section level of @subsubsection which is too low ./archive.texi:54: raising the section level of @subsubsection which is too low ./format.texi:27: raising the section level of @subsubsection which is too low ./reloc.texi:495: raising the section level of @subsubsection which is too low ./core.texi:8: raising the section level of @subsubsection which is too low ./opncls.texi:5: raising the section level of @subsubsection which is too low ./libbfd.texi:10: raising the section level of @subsubsection which is too low ./cache.texi:14: raising the section level of @subsubsection which is too low ./elf.texi:13: raising the section level of @subsubsection which is too low make[2]: *** [bfd.info] Error 1 make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_gdb-apple/gdb-apple/work/gdb-1824/src- x86_64/bfd/doc' make[1]: *** [info-recursive] Error 1 make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_gdb-apple/gdb-apple/work/gdb-1824/src- x86_64/bfd' make: *** [all-bfd] Error 2 make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_gdb-apple/gdb-apple/work/gdb-1824/src- x86_64' Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_gdb-apple/gdb-apple/work/gdb-1824/src- x86_64" && /usr/bin/make -w all MAKEINFO="/opt/local/bin/makeinfo" LEXLIB="/opt/local/lib/libfl.a" Exit code: 2 Error: org.macports.build for port gdb-apple returned: command execution failed DEBUG: Error code: NONE DEBUG: Backtrace: command execution failed }}} Whenever I ran into this error when building my fork of gdb-apple manually, I would always work around it by making sure that a copy of texinfo4 appeared first in my path... I guess the solution here would be to use the system `makeinfo` (i.e. `/usr/bin/makeinfo`) here instead of the MacPorts one, as that is still version 4, at least on my machine: {{{ Local-Admins-MacBook-Pro:~ ericgallager$ /usr/bin/makeinfo --version makeinfo (GNU texinfo) 4.8 Copyright (C) 2004 Free Software Foundation, Inc. There is NO warranty. You may redistribute this software under the terms of the GNU General Public License. For more information about these matters, see the files named COPYING. }}} -- Ticket URL: <https://trac.macports.org/ticket/42796> MacPorts <http://www.macports.org/> Ports system for OS X

1 4

[MacPorts] #36438: libgdiplus build fails when upgrading gcc47
by MacPorts 06 Jun '14

06 Jun '14

#36438: libgdiplus build fails when upgrading gcc47 -----------------------------------+-------------------------------- Reporter: ahelfer1971@… | Owner: macports-tickets@… Type: defect | Status: new Priority: High | Milestone: Component: ports | Version: 2.1.2 Keywords: lion gcc47 libgdiplus | Port: gcc47 -----------------------------------+-------------------------------- When attempting an upgrade of gcc47, dependency libgdiplus fails. -- Ticket URL: <https://trac.macports.org/ticket/36438> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 42

[MacPorts] #35522: webkit-gtk 1.6.3_4 +quartz can't find X11
by MacPorts 06 Jun '14

06 Jun '14

#35522: webkit-gtk 1.6.3_4 +quartz can't find X11 -----------------------------+---------------------------------------------- Reporter: dansbox@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.2 Keywords: | Port: webkit-gtk -----------------------------+---------------------------------------------- Getting a build failure in webkit-gtk 1.6.3_4. It can't find X11 headers. {{{ :info:build ./Source/WebCore/plugins/npapi.h:93:22: error: X11/Xlib.h: No such file or directory :info:build ./Source/WebCore/plugins/npapi.h:94:23: error: X11/Xutil.h: No such file or directory }}} This is in Mountain Lion (10.8.0). I'm trying to build gnucash for Quartz, which requires the +quartz option here, along with +quartz and +no_x11 in some of the dependencies (e.g., gtk2 @2.24.10_2+no_x11+quartz). -- Ticket URL: <https://trac.macports.org/ticket/35522> MacPorts <http://www.macports.org/> Ports system for Mac OS

1 9

[MacPorts] #43601: [port adandoned] Ports owned by gmail.com:cedric.luthi
by MacPorts 06 Jun '14

06 Jun '14

#43601: [port adandoned] Ports owned by gmail.com:cedric.luthi -------------------------+------------------------------------------------- Reporter: mf2k@… | Owner: cedric.luthi@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: AtomicParsley cksfv class-dump | libxml2 mimms mp4v2 ophcrack py27-termcolor upx | xmlindent -------------------------+------------------------------------------------- gmail.com:cedric.luthi has not responded to at least the following tickets: #16110, #34539, #35682, #39203, #40830, #41961. {{{ $ port echo maintainers:cedric.luthi AtomicParsley cksfv class-dump libxml2 mimms mp4v2 ophcrack py27-termcolor upx xmlindent }}} -- Ticket URL: <https://trac.macports.org/ticket/43601> MacPorts <http://www.macports.org/> Ports system for OS X

1 4

[MacPorts] #43775: gmsh 2.8.3 rebuild fails
by MacPorts 06 Jun '14

06 Jun '14

#43775: gmsh 2.8.3 rebuild fails ----------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: gmsh ----------------------------+-------------------------------- As per a recent discussion on the MacPorts mailing list, I went and replaced XQuartz with the MacPorts xorg-server. When scanning for link errors, gmsh was kicked out. The rebuild fails, with a :info:build ld: framework not found vecLib This is strange as on my Mavericks system there is the symlink between /System/Library/Frameworks/Accelerate.framework and /System/Library/Frameworks/vecLib.framework. Full main.log attached. -- Ticket URL: <https://trac.macports.org/ticket/43775> MacPorts <http://www.macports.org/> Ports system for OS X

1 7

[MacPorts] #43817: Cannot port install dolfin
by MacPorts 06 Jun '14

06 Jun '14

#43817: Cannot port install dolfin -----------------------------+-------------------------------- Reporter: eld.khattatov@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.0 Keywords: Dolfin | Port: -----------------------------+-------------------------------- Trying to install dolfin on Mac OS X 10.9, it fails with the following error: {{{ ---> Computing dependencies for dolfin ---> Configuring dolfin Error: org.macports.configure for port dolfin returned: configure failure: command execution failed Please see the log file for port dolfin for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port dolfin failed MacBook-Pro-Admin:~ admin$ sudo port clean dolfin Password: ---> Cleaning dolfin MacBook-Pro-Admin:~ admin$ sudo port install dolfin ---> Computing dependencies for dolfin ---> Fetching archive for dolfin ---> Attempting to fetch dolfin-1.3.0_2+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/dolfin ---> Attempting to fetch dolfin-1.3.0_2+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://packages.macports.org/dolfin ---> Attempting to fetch dolfin-1.3.0_2+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/dolfin ---> Fetching distfiles for dolfin ---> Verifying checksums for dolfin ---> Extracting dolfin ---> Configuring dolfin Error: org.macports.configure for port dolfin returned: configure failure: command execution failed Please see the log file for port dolfin for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port dolfin failed }}} I have already port installed boost +mpich, updated the port tree. I read through the tickets #43496 and #42306, trying to follow the recommendations from them, however it still fails. Attached is the log file. -- Ticket URL: <https://trac.macports.org/ticket/43817> MacPorts <http://www.macports.org/> Ports system for OS X

1 4