May 2014 - macports-tickets - lists.macosforge.org

[MacPorts] #40361: Avogadrolibs @0.6.0
by MacPorts 08 May '14

08 May '14

#40361: Avogadrolibs @0.6.0 ------------------------+-------------------------------- Reporter: c.herbig@… | Owner: macports-tickets@… Type: submission | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: haspatch | Port: avogadrolibs ------------------------+-------------------------------- Support libraries for Avogadro2 -- Ticket URL: <https://trac.macports.org/ticket/40361> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #40313: py27-geoip @1.2.7: build fails with libgeoip 1.5.1
by MacPorts 08 May '14

08 May '14

#40313: py27-geoip @1.2.7: build fails with libgeoip 1.5.1 -----------------------------+-------------------------------- Reporter: md14-macports@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: haspatch | Port: py-geoip -----------------------------+-------------------------------- The py27-geoip @1.2.7 port fails to build after the libgeoip 1.5.1 update: {{{ $ sudo port -vs install py27-geoip ... creating build/temp.macosx-10.6-x86_64-2.7 /usr/bin/gcc-4.2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -arch x86_64 -I/opt/local/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c py_GeoIP.c -o build/temp.macosx-10.6-x86_64-2.7/py_GeoIP.o py_GeoIP.c: In function ‘GeoIP_SetAccuracyItemInt’: py_GeoIP.c:272: error: ‘GEOIP_UNKNOWN_ACCURACY_RADIUS’ undeclared (first use in this function) py_GeoIP.c:272: error: (Each undeclared identifier is reported only once py_GeoIP.c:272: error: for each function it appears in.) error: command '/usr/bin/gcc-4.2' failed with exit status 1 Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_python_py-geoip/py27-geoip/work/GeoIP- Python-1.2.7" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build }}} The attached patch fixes this problem by updating py-geoip to 1.2.8. -- Ticket URL: <https://trac.macports.org/ticket/40313> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #40248: port upgrade fails
by MacPorts 08 May '14

08 May '14

#40248: port upgrade fails ------------------------+-------------------------------- Reporter: revkarol@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: root ------------------------+-------------------------------- It may be because I'm trying to use a variant, but I think it's failing to compile because it's trying to use clang as the compiler and that's not installed. -- Ticket URL: <https://trac.macports.org/ticket/40248> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43600: sudo port install gcc46 fails on OSX10.6.8
by MacPorts 08 May '14

08 May '14

#43600: sudo port install gcc46 fails on OSX10.6.8 ---------------------------------+-------------------------------- Reporter: j.c.hartland@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: gcc46 Tcl.framework | Port: gcc46 ---------------------------------+-------------------------------- sudo port install gcc46 fails with the following error message: Error: org.macports.build for port libgcc returned: command execution failed Error: Failed to install libgcc Please see the log file for port libgcc for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_gcc48/libgcc/main.log Error: The following dependencies were not installed: libgcc ppl glpk zlib To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port gcc46 failed I have tried sudo port clean gcc46 but get the same failure. the log file ends with: :error:build Failed to install libgcc :debug:build couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" -- Ticket URL: <https://trac.macports.org/ticket/43600> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #42806: rsync: failed to connect to rsync.macports.org: Connection refused (61)
by MacPorts 08 May '14

08 May '14

#42806: rsync: failed to connect to rsync.macports.org: Connection refused (61) ---------------------------+-------------------------------- Reporter: thibaud4988@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: ---------------------------+-------------------------------- how can I fix it? i am on MAc OS 10.9.2 i am using littlesnitch but i open the port 873 with the protocol 6 port -v selfupdate ---> Updating MacPorts base sources using rsync rsync: failed to connect to rsync.macports.org: Connection refused (61) rsync error: error in socket IO (code 10) at /SourceCache/rsync/rsync-42/rsync/clientserver.c(105) [receiver=2.6.9] Command failed: /usr/bin/rsync -rtzv --delete-after rsync://rsync.macports.org/release/tarballs/base.tar /opt/local/var/macports/sources/rsync.macports.org/release/tarballs Exit code: 10 Error: Error synchronizing MacPorts sources: command execution failed To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed MacBook-Pro-de-Thibaud:~ thibaud$ port -d selfupdate DEBUG: MacPorts sources location: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs ---> Updating MacPorts base sources using rsync rsync: failed to connect to rsync.macports.org: Connection refused (61) rsync error: error in socket IO (code 10) at /SourceCache/rsync/rsync-42/rsync/clientserver.c(105) [receiver=2.6.9] Command failed: /usr/bin/rsync -rtzv --delete-after rsync://rsync.macports.org/release/tarballs/base.tar /opt/local/var/macports/sources/rsync.macports.org/release/tarballs Exit code: 10 DEBUG: Error synchronizing MacPorts sources: command execution failed while executing "macports::selfupdate [array get global_options] base_updated" Error: Error synchronizing MacPorts sources: command execution failed To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed -- Ticket URL: <https://trac.macports.org/ticket/42806> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43176: Self Update failed, need advice
by MacPorts 08 May '14

08 May '14

#43176: Self Update failed, need advice -----------------------+-------------------------------- Reporter: nblouin@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: -----------------------+-------------------------------- I am having difficulties configuring software which requires boost, so i downloaded boost vi macports and received a notice to update ports. Below the messages received, i also pasted the boost error i get when configuring new software. my query is 2-part: how do i get past the update error, and is this related to my configrure unable to locate my $ sudo port install boost Password: Warning: port definitions are more than two weeks old, consider updating them by running 'port selfupdate'. ---> Computing dependencies for boost ---> Cleaning boost ---> Scanning binaries for linking errors: 100.0% ---> No broken files found. BigMacWithCheese-2:silix-1.2.8 nicblouin$ port selfupdate ---> Updating MacPorts base sources using rsync Error: Error synchronizing MacPorts sources: command execution failed Please run `port -v selfupdate' for details. Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed e-2:silix-1.2.8$ port -v selfupdate ---> Updating MacPorts base sources using rsync receiving file list ... done rsync: mkstemp "/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/.base.tar.sMd7I5" failed: Permission denied (13) inflate returned -3 (140 bytes) rsync error: error in rsync protocol data stream (code 12) at /SourceCache/rsync/rsync-40/rsync/token.c(419) [receiver=2.6.9] rsync: connection unexpectedly closed (31 bytes received so far) [generator] rsync error: error in rsync protocol data stream (code 12) at /SourceCache/rsync/rsync-40/rsync/io.c(452) [generator=2.6.9] Command failed: /usr/bin/rsync -rtzv --delete-after rsync://rsync.macports.org/release/tarballs/base.tar /opt/local/var/macports/sources/rsync.macports.org/release/tarballs Exit code: 12 Error: Error synchronizing MacPorts sources: command execution failed To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed e-2:silix-1.2.8$ e-2:silix-1.2.8 ./configure checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... gcc3 checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking build system type... x86_64-apple-darwin10.8.0 checking host system type... x86_64-apple-darwin10.8.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/libexec/gcc/i686-apple- darwin10/4.2.1/ld checking if the linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin10.8.0 file names to x86_64 -apple-darwin10.8.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin10.8.0 file names to toolchain format... func_convert_file_noop checking for /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/libexec/gcc/i686-apple- darwin10/4.2.1/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin10.8.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/libexec/gcc/i686-apple- darwin10/4.2.1/ld checking if the linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no checking whether the g++ linker (/usr/libexec/gcc/i686-apple- darwin10/4.2.1/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fno-common -DPIC checking if g++ PIC flag -fno-common -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/libexec/gcc/i686-apple- darwin10/4.2.1/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin10.8.0 dyld checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes configure: Checking CppUnit checking for cppunit-config... no configure: CppUnit not found... unittesting disabled. Please install CppUnit configure: Checking Boost::program_options checking boost/program_options.hpp usability... no checking boost/program_options.hpp presence... no checking for boost/program_options.hpp... no configure: error: Boost::program_options header files were not found on the system... unable to compile. Please install Boost::program_options headers e-2:silix-1.2.8$ Thanks for any help Nicolas Achille Blouin, Ph.D. Dept. of Biological Sciences University of Rhode Island Kingston, RI 02881 -- Ticket URL: <https://trac.macports.org/ticket/43176> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43409: Unable to selfupdate after installation
by MacPorts 08 May '14

08 May '14

#43409: Unable to selfupdate after installation ---------------------------+-------------------------------- Reporter: crackerhugo@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: ---------------------------+-------------------------------- Hi, I follow the step to step installation guide at end I had the following issue: ---> Updating MacPorts base sources using rsync rsync: failed to connect to rsync.macports.org: Connection refused (61) rsync error: error in socket IO (code 10) at /SourceCache/rsync/rsync-42/rsync/clientserver.c(105) [receiver=2.6.9] Command failed: /usr/bin/rsync -rtzv --delete-after rsync://rsync.macports.org/release/tarballs/base.tar /opt/local/var/macports/sources/rsync.macports.org/release/tarballs Exit code: 10 Error: Error synchronizing MacPorts sources: command execution failed Error: Follow http://guide.macports.org/#project.tickets to report a bug -- Ticket URL: <https://trac.macports.org/ticket/43409> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43633: selfupdate @2.2.1 command execution failed
by MacPorts 08 May '14

08 May '14

#43633: selfupdate @2.2.1 command execution failed -----------------------------+-------------------------------- Reporter: jurgdombroski@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: base | Version: 2.2.1 Keywords: | Port: -----------------------------+-------------------------------- Using OS X 10.7.5 and XCode 4.6.3. selfupdate not working heres what I have after port -d selfupdate: {{{bash-3.2$ port -d selfupdate DEBUG: MacPorts sources location: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs ---> Updating MacPorts base sources using rsync rsync: failed to connect to rsync.macports.org: Operation timed out (60) rsync error: error in socket IO (code 10) at /SourceCache/rsync/rsync-42/rsync/clientserver.c(105) [receiver=2.6.9] Command failed: /usr/bin/rsync -rtzv --delete-after rsync://rsync.macports.org/release/tarballs/base.tar /opt/local/var/macports/sources/rsync.macports.org/release/tarballs Exit code: 10 DEBUG: Error synchronizing MacPorts sources: command execution failed while executing "macports::selfupdate [array get global_options] base_updated" Error: Error synchronizing MacPorts sources: command execution failed To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed}}} -- Ticket URL: <https://trac.macports.org/ticket/43633> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43632: cdrtools @3.00_1: mkisofs receives abort trap on Mavericks host if -graft-points option is used
by MacPorts 08 May '14

08 May '14

#43632: cdrtools @3.00_1: mkisofs receives abort trap on Mavericks host if -graft- points option is used ------------------------+-------------------------------- Reporter: galitsyn@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: mkisofs | Port: cdrtools ------------------------+-------------------------------- Hi Guys! The problem might be easily reproduced here if the next command line is executed: {{{ mkisofs -graft-points a=b }}} This issue occurs on Mavericks (10.9.2) host only and I can't reproduce it on Mountain Lion (10.8.5) host. I took a look to the ftp://ftp.berlios.de/pub/cdrecord/cdrtools-3.00.tar.bz2 sources and was able to fix it for myself. The patch below fixes the issue: {{{ --- cdrtools-3.00/mkisofs/mkisofs.c.orig 2010-04-25 18:29:03.000000000 +0400 +++ cdrtools-3.00/mkisofs/mkisofs.c 2014-05-08 18:04:33.000000000 +0400 @@ -3235,15 +3235,15 @@ /* * Remove unwanted "./" & "/" sequences from start... */ + xpnt = graft_point; do { - xpnt = graft_point; while (xpnt[0] == '.' && xpnt[1] == '/') xpnt += 2; while (*xpnt == PATH_SEPARATOR) { xpnt++; } - strlcpy(graft_point, xpnt, glen); - } while (xpnt > graft_point); + } while (graft_point++ < glen); + graft_point = xpnt; if (node) { node = escstrcpy(nodename, nlen, ++node); }}} The problem was that strlcpy() used source and destination strings which overlap. Could you please take a look to the issue? Thank you! -- Ticket URL: <https://trac.macports.org/ticket/43632> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43618: ipe update to 7.1.5
by MacPorts 08 May '14

08 May '14

#43618: ipe update to 7.1.5 ---------------------------------+-------------------------------- Reporter: m.thon@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: maintainer haspatch | Port: ipe ---------------------------------+-------------------------------- version update to ipe-7.1.5 New: 1) ipe now uses the turbo-jpeg API to read jpeg files. AFAIK this is problematic in MacPorts, since the jpeg and libjpeg-turbo ports conflict, and there is no way to install both. I therefore add a patch to replace the relevant code with the standard jpeg API. Also, I set the jpeg dependency as {{{ path:lib/libjpeg.dylib:jpeg }}} as mentioned in #38907. Hope this is the best way to go. 2) I added a variant to compile the optional "qvoronoi ipelet", since this is now part of the default Windows binary. This currently needs a minor patch to compile with clang. 3) I also used the opportunity to update my maintainer e-mail address. -- Ticket URL: <https://trac.macports.org/ticket/43618> MacPorts <http://www.macports.org/> Ports system for OS X

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