May 2014 - macports-tickets - lists.macosforge.org

[MacPorts] #42871: liferea build fails
by MacPorts 04 Aug '14

04 Aug '14

#42871: liferea build fails --------------------+-------------------------------- Reporter: me@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: liferea --------------------+-------------------------------- Lots of type errors, most seem to come from macro expansion, then one "Undefined symbols for architecture x86_64" -- Ticket URL: <https://trac.macports.org/ticket/42871> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #40514: metar
by MacPorts 04 Aug '14

04 Aug '14

#40514: metar -------------------------+-------------------------------- Reporter: xnando@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: -------------------------+-------------------------------- a simple command line metar and taf. -- Ticket URL: <https://trac.macports.org/ticket/40514> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #42122: cannot start coqide
by MacPorts 04 Aug '14

04 Aug '14

#42122: cannot start coqide -----------------------------------+-------------------------------- Reporter: hippallium-macports@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: coqide | Port: coq -----------------------------------+-------------------------------- {{{ $ sudo port install -v coq +coqide ---> Computing dependencies for coq ---> Cleaning coq ---> Scanning binaries for linking errors: 100.0% ---> No broken files found. $ coqide (process:29213): Gtk-WARNING **: Locale not supported by C library. Using the fallback 'C' locale. Fatal error: exception Gtk.Error("GtkMain.init: initialization failed ml_gtk_init: initialization failed") }}} -- Ticket URL: <https://trac.macports.org/ticket/42122> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #42031: can't install expat
by MacPorts 04 Aug '14

04 Aug '14

#42031: can't install expat -----------------------+-------------------------------- Reporter: avoinov@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: -----------------------+-------------------------------- The error message is: sudo port install expat ---> Verifying checksums for expat Error: org.macports.checksum for port expat returned: expat-2.1.0.tar.gz does not exist in /opt/local/var/macports/distfiles/expat Please see the log file for port expat for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_textproc_expat/expat/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets -- Ticket URL: <https://trac.macports.org/ticket/42031> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #42121: The building of the port coq with the variant +doc fails
by MacPorts 04 Aug '14

04 Aug '14

#42121: The building of the port coq with the variant +doc fails -----------------------------------+-------------------------------- Reporter: hippallium-macports@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: doc | Port: coq -----------------------------------+-------------------------------- The command and the error message are: {{{ $ sudo port install -v coq +coqide +doc Password: ---> Computing dependencies for coq ---> Building coq Error: org.macports.build for port coq returned: command execution failed Please see the log file for port coq for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port coq failed }}} The interesting part of the log file is: {{{ :notice:build ---> Building coq :debug:build Executing org.macports.build (coq) :debug:build port disallows a parallel build :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3" && /usr/bin/make -w world' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3" && /usr/bin/make -w world :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3' :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make --warn-undefined-variable --no-builtin-rules -f Makefile.build "world" :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3' :info:build CHECK revision :info:build This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/MacPorts 2013_5) :info:build restricted \write18 enabled. :info:build entering extended mode :info:build I couldn't open file name `Reference-Manual.aux' :info:build Couldn't find input index file Reference-Manual nor Reference- Manual.idx. :info:build Usage: makeindex [-ilqrcgLT] [-s sty] [-o ind] [-t log] [-p num] [idx0 idx1 ...] :info:build egrep: Reference-Manual.ilg: No such file or directory :info:build Input index file Reference-Manual.tacidx not found. :info:build Usage: makeindex [-ilqrcgLT] [-s sty] [-o ind] [-t log] [-p num] [idx0 idx1 ...] :info:build egrep: Reference-Manual.ilg: No such file or directory :info:build Input index file Reference-Manual.comidx not found. :info:build Usage: makeindex [-ilqrcgLT] [-s sty] [-o ind] [-t log] [-p num] [idx0 idx1 ...] :info:build egrep: Reference-Manual.ilg: No such file or directory :info:build Input index file Reference-Manual.erridx not found. :info:build Usage: makeindex [-ilqrcgLT] [-s sty] [-o ind] [-t log] [-p num] [idx0 idx1 ...] :info:build egrep: Reference-Manual.ilg: No such file or directory :info:build ! LaTeX Error: File `comment.sty' not found. (file Reference- Manual.tex) :info:build :info:build Type X to quit or <RETURN> to proceed, :info:build or enter new name. (Default extension: sty) :info:build :info:build Enter file name: :info:build ! Emergency stop. (file Reference-Manual.tex) :info:build <read *> :info:build :info:build l.15 :info:build ewif :info:build \ifhevea\heveafalse^^M :info:build AddRefMan-pre.tex Cases.tex Cases.v.tex Classes.tex Classes.v.tex Coercion.tex Coercion.v.tex Extraction.tex Extraction.v.tex Helm.tex Micromega.tex Micromega.v.tex Natural.tex Nsatz.tex Nsatz.v.tex Omega.tex Omega.v.tex Polynom.tex Polynom.v.tex Program.tex Program.v.tex RefMan-add.tex RefMan-cic.tex RefMan-cic.v.tex RefMan-coi.tex RefMan- com.tex RefMan-decl.tex RefMan-decl.v.tex RefMan-ext.tex RefMan-ext.v.tex RefMan-gal.tex RefMan-gal.v.tex RefMan-ide.tex RefMan-ind.tex RefMan- int.tex RefMan-lib.tex RefMan-lib.v.tex RefMan-ltac.tex RefMan-ltac.v.tex RefMan-mod.tex RefMan-mod.v.tex RefMan-modr.tex RefMan-oth.tex RefMan- oth.v.tex RefMan-pre.tex RefMan-pro.tex RefMan-pro.v.tex RefMan-sch.tex RefMan-sch.v.tex RefMan-syn.tex RefMan-syn.v.tex RefMan-tac.tex RefMan- tac.v.tex RefMan-tacex.tex RefMan-tacex.v.tex RefMan-tus.tex RefMan- uti.tex Reference-Manual.log Reference-Manual.tex Setoid.tex Setoid.v.tex biblio.bib coqdoc.tex coqide-queries.eps coqide-queries.png coqide.eps coqide.png headers.hva headers.sty hevea.sty index.html menu.html styles.hva (cannot ^Mead from terminal in nonstop modes) :info:build :info:build :info:build Here is how much of TeX's memory you used: :info:build 1466 strings out of 494228 :info:build 16211 string characters out of 6157730 :info:build 64170 words of memory out of 5000000 :info:build 4789 multiletter control sequences out of 15000+600000 :info:build 4709 words of font info for 16 fonts, out of 8000000 for 9000 :info:build 430 hyphenation exceptions out of 8191 :info:build 27i,0n,26p,228b,37s stack positions out of 5000i,500n,10000p,200000b,80000s :info:build No pages of output. :info:build :info:build make[1]: *** [doc/refman/Reference-Manual.dvi] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3' :info:build make: *** [world] Error 2 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3' :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/work/coq-8.4pl3" && /usr/bin/make -w world :info:build Exit code: 2 :error:build org.macports.build for port coq returned: command execution failed :debug:build Error code: CHILDSTATUS 82434 2 :debug:build Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "$procedure $targetname" :info:build Warning: targets not executed for coq: org.macports.activate org.macports.build org.macports.destroot org.macports.install :notice:build Please see the log file for port coq for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_coq/coq/main.log }}} Thank you, David -- Ticket URL: <https://trac.macports.org/ticket/42121> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43700: Move back freetds to stableversion
by MacPorts 03 Aug '14

03 Aug '14

#43700: Move back freetds to stableversion -----------------------+-------------------------------- Reporter: stronk7@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: -----------------------+-------------------------------- With https://trac.macports.org/changeset/99639 the freetds port was moved to 0.92.405 0.92 is a development version and 405 is already 1.5y old. More yet, it has some important issues handling LOBs and restrictions about logging/debugging, that seem to be enabled by default, conflicting with any attempt to disable it @ freetds.conf. Also a lot of issues have been fixed since 405 till today, many of them backported to 0.91. So this is a request to move back to 0.91 (stable version) point 103. I've switched here, using it from MSSQL, and it really seems to be quicker and more stable. For your consideration. The change is trivial. The only point is that it implies a "downgrade" (version.wise). Ciao :-) -- Ticket URL: <https://trac.macports.org/ticket/43700> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43144: p5-test-simple: update to 1.001003
by MacPorts 03 Aug '14

03 Aug '14

#43144: p5-test-simple: update to 1.001003 ---------------------+---------------------------- Reporter: mojca@… | Owner: sal@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: p5-test-simple ---------------------+---------------------------- {{{ > port livecheck p5-test-simple p5-test-simple seems to have been updated (port version: 0.98, new version: 1.001003) }}} -- Ticket URL: <https://trac.macports.org/ticket/43144> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #41876: maven-ant-tasks cannot find JAVA_HOME correctly
by MacPorts 03 Aug '14

03 Aug '14

#41876: maven-ant-tasks cannot find JAVA_HOME correctly ---------------------------------------+-------------------------------- Reporter: ritchiecai@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: maven-ant-tasks JAVA_HOME | Port: maven-ant-tasks ---------------------------------------+-------------------------------- Just upgraded to Mavericks, maven-ant-tasks failed while upgrading macport. here is the error: {{{ :debug:build Executing org.macports.build (maven-ant-tasks) :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_maven-ant-tasks/maven-ant- tasks/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' HOME='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_maven-ant-tasks/maven-ant- tasks/work/home' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_maven-ant-tasks/maven-ant-tasks/work /maven-ant-tasks-2.1.3" && mvn package' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_maven-ant-tasks/maven-ant-tasks/work /maven-ant-tasks-2.1.3" && mvn package :info:build Error: JAVA_HOME is not defined correctly. :info:build We cannot execute /System/Library/Frameworks/JavaVM.framework/Versions/CurrentJDK/Home/bin/java :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_devel_maven-ant-tasks/maven-ant-tasks/work /maven-ant-tasks-2.1.3" && mvn package :info:build Exit code: 1 }}} I tried to clean and rebuild, it gives the same error. JAVE_HOME is defined: {{{ echo $JAVA_HOME /Library/Java/JavaVirtualMachines/jdk/Contents/Home /usr/libexec/java_home /Library/Java/JavaVirtualMachines/jdk/Contents/Home }}} No idea how macport get /System/Library/Frameworks/JavaVM.framework/Versions/CurrentJDK/Home as JAVA_HOME, I never defined it anywhere. Also: {{{ mvn -version Apache Maven 2.2.1 (r801777; 2009-08-06 14:16:01-0500) Java version: 1.7.0_45 Java home: /Library/Java/JavaVirtualMachines/jdk1.7.0_45.jdk/Contents/Home/jre Default locale: en_US, platform encoding: UTF-8 OS name: "mac os x" version: "10.9.1" arch: "x86_64" Family: "mac" }}} -- Ticket URL: <https://trac.macports.org/ticket/41876> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43381: openmpi-default @1.7.5_1+gcc48 does not work with hwloc @1.9_0
by MacPorts 02 Aug '14

02 Aug '14

#43381: openmpi-default @1.7.5_1+gcc48 does not work with hwloc @1.9_0 ------------------------+------------------------------------ Reporter: dstrubbe@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: openmpi-default, hwloc ------------------------+------------------------------------ I get the error below for a simple test program. It does work if I downgrade to hwloc @1.8.1_0 and rebuild openmpi though. (Activating hwloc 1.9_0 without rebuilding openmpi makes the error come again.) I have OSX 10.8.5, XCode 5.1. It did work fine on my other computer, with openmpi- default @1.7.5_1+gcc45, OSX 10.6.8, XCode 3.2.6. {{{ $ mpif90-openmpi-mp test_new.f90 $[mpiexec-openmpi-mp -n 1 ./a.out [[38689,1],0] ORTE_ERROR_LOG: Error in file /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_openmpi /openmpi-default/work/openmpi-1.7.5/orte/util/nidmap.c at line 106 [[38689,1],0] ORTE_ERROR_LOG: Error in file /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_openmpi /openmpi-default/work/openmpi-1.7.5/orte/mca/ess/env/ess_env_module.c at line 154 -------------------------------------------------------------------------- It looks like orte_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during orte_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): orte_util_nidmap_init failed --> Returned value Error (-1) instead of ORTE_SUCCESS -------------------------------------------------------------------------- -------------------------------------------------------------------------- It looks like orte_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during orte_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): orte_ess_init failed --> Returned value Error (-1) instead of ORTE_SUCCESS -------------------------------------------------------------------------- -------------------------------------------------------------------------- It looks like MPI_INIT failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during MPI_INIT; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relev------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code.. Per user-direction, the job has been aborted. ------------------------------------------------------- *** An error occurred in MPI_Init *** on a NULL communicator *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort, *** and potentially your MPI job) Local abort before MPI_INIT completed successfully; not able to aggregate error messages, and not able to guarantee that all other processes were killed! -------------------------------------------------------------------------- mpiexec-openmpi-mp detected that one or more processes exited with non- zero status, thus causing the job to be terminated. The first process to do so was: Process name: [[38689,1],0] Exit code: 1 -------------------------------------------------------------------------- }}} A couple of threads describing a similar situation on Fedora suggests it is related to some conflict between different versions of OpenMPI, which inspired me to try swapping the hwloc version: http://www.open-mpi.org/community/lists/users/2013/07/22346.php https://lists.fedoraproject.org/pipermail/users/2013-July/438349.html -- Ticket URL: <https://trac.macports.org/ticket/43381> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #37097: DSDP should include atlas variant *option*
by MacPorts 01 Aug '14

01 Aug '14

#37097: DSDP should include atlas variant *option* ---------------------------------+-------------------------------- Reporter: dallas.johnston@… | Owner: macports-tickets@… Type: defect | Status: new Priority: High | Milestone: Component: ports | Version: 2.1.2 Keywords: dsdp, atlas, cvxopt | Port: dsdp ---------------------------------+-------------------------------- Many people have run into issues building DSDP and other ports that depend on it (like cvxopt) due to linker issues with building against ATLAS. It is suggested that a atlas variant option is created for DSDP in order to enable default linking against the Accelerator Framework libs provided by Apple. I have tested building cvxopt with -dsdp and it -atlas, which compiles and runs without errors. -- Ticket URL: <https://trac.macports.org/ticket/37097> MacPorts <http://www.macports.org/> Ports system for Mac OS

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