June 2014 - macports-tickets - lists.macosforge.org

[MacPorts] #39633: py-psychopy: update to 1.77.01
by MacPorts 02 Sep '14

02 Sep '14

#39633: py-psychopy: update to 1.77.01 --------------------+------------------------- Reporter: jmr@… | Owner: jameskyle@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: py-psychopy --------------------+------------------------- http://www.psychopy.org/changelog.html -- Ticket URL: <https://trac.macports.org/ticket/39633> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #43806: shogun unable to test for swig version?
by MacPorts 02 Sep '14

02 Sep '14

#43806: shogun unable to test for swig version? ---------------------------+-------------------------------- Reporter: andre.david@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.0 Keywords: | Port: shogun ---------------------------+-------------------------------- In mavericks I asked for `shogun +python7` and got: {{{ :info:configure Checking for SWIG ... 3.0.0 ... too old version 2.0.4 or later required :info:configure :info:configure Error: swig required for modular interfaces :info:configure :info:configure Check configure.log if you do not understand why it failed. :info:configure The last 20 lines of configure.log are shown below :info:configure :info:configure /opt/local/lib/libhdf5.8.dylib (compatibility version 9.0.0, current version 9.1.0) :info:configure /opt/local/lib/libjson.0.dylib (compatibility version 1.0.0, current version 1.1.0) :info:configure /opt/local/lib/libxml2.2.dylib (compatibility version 12.0.0, current version 12.1.0) :info:configure /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib (compatibility version 1.0.0, current version 1.0.0) :info:configure /opt/local/lib/libarpack.2.dylib (compatibility version 3.0.0, current version 3.0.0) :info:configure /opt/local/lib/libglpk.33.dylib (compatibility version 34.0.0, current version 34.0.0) :info:configure /opt/local/lib/liblzo2.2.dylib (compatibility version 3.0.0, current version 3.0.0) :info:configure /opt/local/lib/libsnappy.1.dylib (compatibility version 4.0.0, current version 4.0.0) :info:configure /opt/local/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.8) :info:configure /opt/local/lib/libbz2.1.0.dylib (compatibility version 1.0.0, current version 1.0.6) :info:configure /opt/local/lib/liblzma.5.dylib (compatibility version 6.0.0, current version 6.5.0) :info:configure /opt/local/lib/liblpsolve55.dylib (compatibility version 5.5.0, current version 5.5.0) :info:configure :info:configure Result is: yes :info:configure ########################################## :info:configure :info:configure ============ Checking for SWIG ============ :info:configure Result is: 3.0.0 ... too old version 2.0.4 or later required :info:configure ########################################## :info:configure :info:configure Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_shogun/shogun/work/shogun-2.1.0/src" && ./configure --prefix=/opt/local --ldflags=-lgfortran --enable-hdf5 --enable-json --enable-xml --enable-readline --enable-largefile --disable- spinlocks --enable-lapack --enable-arpack --disable-mosek --disable- superlu --disable-nlopt --enable-eigen3 --disable-cplex --enable-lpsolve --enable-glpk --enable-lzo --enable-snappy --enable-gzip --enable-bzip2 --enable-lzma --enable-bigstates --enable-hmmcache --enable-svm-light --disable-logcache --enable-shortrealkernelcache --enable-logsum-array --disable-doxygen --enable-optimization --includes=/opt/local/include --libs=/opt/local/lib --destdir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_shogun/shogun/work/destroot --prefix=/opt/local --interfaces=cmdline_static,python_modular --enable- cpudetection --python=/opt/local/bin/python2.7 --pydir=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages --includes=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 --enable-hmm-parallel :info:configure Exit code: 1 :error:configure org.macports.configure for port shogun returned: configure failure: command execution failed :debug:configure Error code: NONE :debug:configure Backtrace: configure failure: command execution failed while executing "$procedure $targetname" :info:configure Warning: targets not executed for shogun: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install }}} This is similar to what triggered #34990, but there the discussion ended up veering to a build problem, while here it is a configure problem. I looked into shogun's configure script and the function doing the check is: {{{ assert_version() { name=$1 mode=$2 is_ver=$3 wanted_ver=$4 is=(`echo $is_ver| sed 's/\./ /g'`) wanted=(`echo $wanted_ver | sed 's/\./ /g'`) if test -z "$is"; then die "$name did not return version information" fi i=0 while test $i -lt ${#is[*]} 2>/dev/null && test $i -lt ${#wanted[*]} 2>/dev/null ; do if test ${is[i]} -lt ${wanted[i]}; then if test "$mode" = yes; then die "$name is outdated: version $wanted_ver required got version $is_ver." fi if test "$mode" = auto; then echores "`echo $is_ver` ... too old version $wanted_ver or later required" return 1 fi return 1 fi if test ${is[i]} -lt ${wanted[i]}; then return 0 fi let i++ done return 0 } }}} So, is it just me or this function will croak if '''any''' of the version fields is smaller? I.e., in this case 3.0.0 will fail against 2.0.4 because 0 < 4... Bump to shogun devs? -- Ticket URL: <https://trac.macports.org/ticket/43806> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #34990: SHOGUN installation: Error: swig too old version 1.3.36 or later required
by MacPorts 02 Sep '14

02 Sep '14

#34990: SHOGUN installation: Error: swig too old version 1.3.36 or later required -------------------------------+-------------------------------------------- Reporter: noelia@… | Owner: macports-tickets@… Type: request | Status: new Priority: High | Milestone: Component: ports | Version: 2.1.1 Keywords: shogun | Port: shogun -------------------------------+-------------------------------------------- The version of shogun on macports (0.9.3) came out before swig version 2.x.x. The source of the error is that configure does not check for the first digit in the version. REQUEST: Update the shogun port to the current release -- Ticket URL: <https://trac.macports.org/ticket/34990> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28873: shogun @0.9.3 build failure
by MacPorts 02 Sep '14

02 Sep '14

#28873: shogun @0.9.3 build failure --------------------------------------+------------------------------------- Reporter: tal.yarkoni@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: | Port: shogun --------------------------------------+------------------------------------- I can't get shogun 0.9.3 to build; relevant (I think) part of log below; full log attached. I'm running 10.6.6 with MacPorts 1.9.2 and Xcode 3.2.6 on a new (early 2011) MacBook Pro. I've tried uninstalling, cleaning, and reinstalling the complete dependency tree and get the same error. Any suggestions would be much appreciated. {{{ :info:build /opt/local/bin/g++-mp-4.4 -fPIC -pipe -O2 -m64 -g -Wall -Wno- unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -Wno-deprecated -O9 -fexpensive-optimizations -frerun-cse-after- loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread- jumps -fforce-addr -fstrength-reduce -funroll-loops -march=native -mtune=native -pthread -DSWIG_TYPE_TABLE=shogun -DDARWIN -DHAVE_POWL -DHAVE_SQRTL -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_LAPACK -DHAVE_LAPACK -DUSE_GLPK -DUSE_GZIP -DUSE_BZIP2 -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_HMMPARALLELSTRUCTURES -DUSE_HMMPARALLEL -DUSE_BIGSTATES -DUSE_HMMCACHE -DUSE_REFERENCE_COUNTING -DGPL -DSWIG_TYPE_TABLE=shogun -DDARWIN -DHAVE_POWL -DHAVE_SQRTL -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_LAPACK -DHAVE_LAPACK -DUSE_GLPK -DUSE_GZIP -DUSE_BZIP2 -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_HMMPARALLELSTRUCTURES -DUSE_HMMPARALLEL -DUSE_BIGSTATES -DUSE_HMMCACHE -DUSE_REFERENCE_COUNTING -DGPL -c -I. -I.. -I. -I.. -I/opt/local/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -I/opt/local/include -I../libshogun -I.. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp :info:build /opt/local/bin/g++-mp-4.4 -fPIC -pipe -O2 -m64 -g -Wall -Wno- unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -Wno-deprecated -O9 -fexpensive-optimizations -frerun-cse-after- loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread- jumps -fforce-addr -fstrength-reduce -funroll-loops -march=native -mtune=native -pthread -DSWIG_TYPE_TABLE=shogun -DDARWIN -DHAVE_POWL -DHAVE_SQRTL -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_LAPACK -DHAVE_LAPACK -DUSE_GLPK -DUSE_GZIP -DUSE_BZIP2 -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_HMMPARALLELSTRUCTURES -DUSE_HMMPARALLEL -DUSE_BIGSTATES -DUSE_HMMCACHE -DUSE_REFERENCE_COUNTING -DGPL -DSWIG_TYPE_TABLE=shogun -DDARWIN -DHAVE_POWL -DHAVE_SQRTL -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_LAPACK -DHAVE_LAPACK -DUSE_GLPK -DUSE_GZIP -DUSE_BZIP2 -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_HMMPARALLELSTRUCTURES -DUSE_HMMPARALLEL -DUSE_BIGSTATES -DUSE_HMMCACHE -DUSE_REFERENCE_COUNTING -DGPL -c -I. -I.. -I. -I.. -I/opt/local/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -I/opt/local/include -I../libshogun -I.. -o classifier/KNN.cpp.o classifier/KNN.cpp :info:build {standard input}:93:no such instruction: `vmovsd (%rdx,%rbx,8), %xmm0' :info:build {standard input}:111:no such instruction: `vmovsd LC2(%rip), %xmm0' ... goes on like this for a while... ... :info:build {standard input}:4095:no such instruction: `vmovsd %xmm1, (%r8)' :info:build {standard input}:4104:no such instruction: `vmovsd %xmm0, (%r9)' :info:build make[1]: *** [classifier/KNN.cpp.o] Error 1 :info:build make: *** [all] Error 2 :info:build shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_shogun/work/shogun-0.9.3/src" && /usr/bin/make -j5 all " returned error 2 :error:build Target org.macports.build returned: shell command failed (see log for details) }}} -- Ticket URL: <https://trac.macports.org/ticket/28873> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #41914: bastet: update to 0.43
by MacPorts 02 Sep '14

02 Sep '14

#41914: bastet: update to 0.43 --------------------------+---------------------- Reporter: ryandesign@… | Owner: sfiera@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: bastet --------------------------+---------------------- {{{ $ port livecheck bastet bastet seems to have been updated (port version: 0.41, new version: 0.43) }}} Note that 0.43 is a complete rewrite. -- Ticket URL: <https://trac.macports.org/ticket/41914> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #44166: libtasn1 4.0
by MacPorts 02 Sep '14

02 Sep '14

#44166: libtasn1 4.0 ----------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.1 Keywords: | Port: libtasn1 ----------------------------+-------------------------------- libtasn1 has been updated upstream to version 4.0. -- Ticket URL: <https://trac.macports.org/ticket/44166> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #42927: libapreq2 not working, can't start apache2
by MacPorts 02 Sep '14

02 Sep '14

#42927: libapreq2 not working, can't start apache2 -----------------------+-------------------------------- Reporter: jul_bsd@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: p5-libapreq2 -----------------------+-------------------------------- When starting apache2 w this module {{{ httpd: Syntax error on line 495 of /opt/local/apache2/conf/httpd.conf: Syntax error on line 4 of /opt/local/apache2/conf/extra/apache-cif.conf: Cannot load /opt/local/apache2/modules/mod_apreq2.so into server: dlopen(/opt/local/apache2/modules/mod_apreq2.so, 10): Library not loaded: /opt/local/lib/libexpat.1.dylib\n Referenced from: /opt/local/apache2/modules/mod_apreq2.so\n Reason: Incompatible library version: mod_apreq2.so requires version 8.0.0 or later, but libexpat.1.dylib provides version 7.0.0 }}} {{{ $ otool -L /opt/local/apache2/modules/mod_apreq2.so /opt/local/apache2/modules/mod_apreq2.so: /opt/local/lib/libapreq2.3.dylib (compatibility version 12.0.0, current version 12.0.0) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1197.1.1) /opt/local/lib/libexpat.1.dylib (compatibility version 8.0.0, current version 8.0.0) /opt/local/lib/libiconv.2.dylib (compatibility version 8.0.0, current version 8.1.0) /opt/local/lib/libapr-1.0.dylib (compatibility version 6.0.0, current version 6.0.0) /opt/local/lib/libaprutil-1.0.dylib (compatibility version 6.0.0, current version 6.3.0) $ otool -L /opt/local/apache2/modules/mod_perl.so /opt/local/apache2/modules/mod_perl.so: /opt/local/lib/perl5/5.16.1/darwin-thread-multi- 2level/CORE/libperl.dylib (compatibility version 5.16.0, current version 5.16.1) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1197.1.1) /usr/lib/libutil.dylib (compatibility version 1.0.0, current version 1.0.0) /usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 2577.0.0) $ locate libexpat.1.dylib /Applications/Extra/Print/GIMP.app/Contents/Resources/lib/libexpat.1.dylib /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.8.sdk/usr/lib/libexpat.1.dylib /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.9.sdk/usr/lib/libexpat.1.dylib /Developer/SDKs/MacOSX10.5.sdk/usr/lib/libexpat.1.dylib /Developer/SDKs/MacOSX10.6.sdk/usr/lib/libexpat.1.dylib /Volumes/Data/opt.old2/local/lib/libexpat.1.dylib /opt/local/lib/libexpat.1.dylib /usr/lib/libexpat.1.dylib $ otool -L /usr/lib/libexpat.1.dylib /usr/lib/libexpat.1.dylib: /usr/lib/libexpat.1.dylib (compatibility version 7.0.0, current version 7.2.0) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1197.1.1) $ port installed |egrep '(apreq|mod_perl|apache)' apache2 @2.2.26_0+preforkmpm (active) mod_perl2 @2.0.7_1 (active) p5.16-apache2-rest @0.70.0_0 (active) p5.16-libapreq2 @2.130.0_3 (active) }}} -- Ticket URL: <https://trac.macports.org/ticket/42927> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #44024: mpd-devel: update to recent git master ?
by MacPorts 02 Sep '14

02 Sep '14

#44024: mpd-devel: update to recent git master ? ----------------------+----------------------- Reporter: devans@… | Owner: sfiera@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: mpd-devel ----------------------+----------------------- This port is way out of date and there are no current unstable tarballs that are newer than the current stable version. And it doesn't build. I suggest modifying the port to build a recent git snapshot. There seems to have been some substantial changes since 0.18.11. Otherwise perhaps it should be marked obsolete replaced by mpd. -- Ticket URL: <https://trac.macports.org/ticket/44024> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #39640: Duplicate symbol __gcry_mpih_add_1 when linking libgcrypt
by MacPorts 02 Sep '14

02 Sep '14

#39640: Duplicate symbol __gcry_mpih_add_1 when linking libgcrypt --------------------------------+-------------------------------- Reporter: johan.mattsson.m@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: libgcrypt --------------------------------+-------------------------------- Hi I get an error when I try to install libgcrypt. Logfile is attached. Here is the failing step: Making all in src make[2]: Entering directory `/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src' /bin/sh ../libtool --tag=CC --mode=link /Developer/usr/bin/clang -I/opt/birdfont/include -pipe -O2 -std=gnu89 -fheinous-gnu-extensions -arch i386 -Wall -version-info 18:0:7 -L/opt/birdfont/lib -arch i386 -o libgcrypt.la -rpath /opt/birdfont/lib libgcrypt_la-visibility.lo libgcrypt_la-misc.lo libgcrypt_la-global.lo libgcrypt_la-sexp.lo libgcrypt_la-hwfeatures.lo libgcrypt_la-stdmem.lo libgcrypt_la-secmem.lo libgcrypt_la-missing-string.lo libgcrypt_la-module.lo libgcrypt_la-fips.lo libgcrypt_la-hmac256.lo libgcrypt_la-ath.lo ../cipher/libcipher.la ../random/librandom.la ../mpi/libmpi.la ../compat/libcompat.la -L/opt/birdfont/lib -lgpg-error libtool: link: rm -fr .libs/libgcrypt.lax libtool: link: (cd .libs/libgcrypt.lax/libcipher.a && ar x "/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src/../cipher/.libs/libcipher.a") libtool: link: (cd .libs/libgcrypt.lax/librandom.a && ar x "/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src/../random/.libs/librandom.a") libtool: link: (cd .libs/libgcrypt.lax/libmpi.a && ar x "/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src/../mpi/.libs/libmpi.a") libtool: link: (cd .libs/libgcrypt.lax/libcompat.a && ar x "/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src/../compat/.libs/libcompat.a") libtool: link: /Developer/usr/bin/clang -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libgcrypt.11.dylib .libs/libgcrypt_la- visibility.o .libs/libgcrypt_la-misc.o .libs/libgcrypt_la-global.o .libs /libgcrypt_la-sexp.o .libs/libgcrypt_la-hwfeatures.o .libs/libgcrypt_la- stdmem.o .libs/libgcrypt_la-secmem.o .libs/libgcrypt_la-missing-string.o .libs/libgcrypt_la-module.o .libs/libgcrypt_la-fips.o .libs/libgcrypt_la- hmac256.o .libs/libgcrypt_la-ath.o .libs/libgcrypt.lax/libcipher.a/ac.o .libs/libgcrypt.lax/libcipher.a/arcfour.o .libs/libgcrypt.lax/libcipher.a/blowfish.o .libs/libgcrypt.lax/libcipher.a /camellia-glue.o .libs/libgcrypt.lax/libcipher.a/camellia.o .libs/libgcrypt.lax/libcipher.a/cast5.o .libs/libgcrypt.lax/libcipher.a/cipher.o .libs/libgcrypt.lax/libcipher.a/crc.o .libs/libgcrypt.lax/libcipher.a/des.o .libs/libgcrypt.lax/libcipher.a/dsa.o .libs/libgcrypt.lax/libcipher.a/ecc.o .libs/libgcrypt.lax/libcipher.a/elgamal.o .libs/libgcrypt.lax/libcipher.a /hash-common.o .libs/libgcrypt.lax/libcipher.a/hmac-tests.o .libs/libgcrypt.lax/libcipher.a/kdf.o .libs/libgcrypt.lax/libcipher.a/md.o .libs/libgcrypt.lax/libcipher.a/md4.o .libs/libgcrypt.lax/libcipher.a/md5.o .libs/libgcrypt.lax/libcipher.a/primegen.o .libs/libgcrypt.lax/libcipher.a/pubkey.o .libs/libgcrypt.lax/libcipher.a/rfc2268.o .libs/libgcrypt.lax/libcipher.a/rijndael.o .libs/libgcrypt.lax/libcipher.a/rmd160.o .libs/libgcrypt.lax/libcipher.a/rsa.o .libs/libgcrypt.lax/libcipher.a/seed.o .libs/libgcrypt.lax/libcipher.a/serpent.o .libs/libgcrypt.lax/libcipher.a/sha1.o .libs/libgcrypt.lax/libcipher.a/sha256.o .libs/libgcrypt.lax/libcipher.a/sha512.o .libs/libgcrypt.lax/libcipher.a/tiger.o .libs/libgcrypt.lax/libcipher.a/twofish.o .libs/libgcrypt.lax/libcipher.a/whirlpool.o .libs/libgcrypt.lax/librandom.a/random-csprng.o .libs/libgcrypt.lax/librandom.a/random-fips.o .libs/libgcrypt.lax/librandom.a/random.o .libs/libgcrypt.lax/librandom.a/rndhw.o .libs/libgcrypt.lax/librandom.a/rndlinux.o .libs/libgcrypt.lax/libmpi.a/ec.o .libs/libgcrypt.lax/libmpi.a/mpi-add.o .libs/libgcrypt.lax/libmpi.a/mpi-bit.o .libs/libgcrypt.lax/libmpi.a/mpi- cmp.o .libs/libgcrypt.lax/libmpi.a/mpi-div.o .libs/libgcrypt.lax/libmpi.a /mpi-gcd.o .libs/libgcrypt.lax/libmpi.a/mpi-inline.o .libs/libgcrypt.lax/libmpi.a/mpi-inv.o .libs/libgcrypt.lax/libmpi.a/mpi- mod.o .libs/libgcrypt.lax/libmpi.a/mpi-mpow.o .libs/libgcrypt.lax/libmpi.a /mpi-mul.o .libs/libgcrypt.lax/libmpi.a/mpi-pow.o .libs/libgcrypt.lax/libmpi.a/mpi-scan.o .libs/libgcrypt.lax/libmpi.a/mpicoder.o .libs/libgcrypt.lax/libmpi.a/mpih- add1.o .libs/libgcrypt.lax/libmpi.a/mpih-div.o .libs/libgcrypt.lax/libmpi.a/mpih-lshift.o .libs/libgcrypt.lax/libmpi.a /mpih-mul.o .libs/libgcrypt.lax/libmpi.a/mpih-mul1.o .libs/libgcrypt.lax/libmpi.a/mpih-mul2.o .libs/libgcrypt.lax/libmpi.a /mpih-mul3.o .libs/libgcrypt.lax/libmpi.a/mpih-rshift.o .libs/libgcrypt.lax/libmpi.a/mpih-sub1.o .libs/libgcrypt.lax/libmpi.a/mpiutil.o .libs/libgcrypt.lax/libcompat.a/compat.o -L/opt/birdfont/lib /opt/birdfont/lib/libgpg-error.dylib -arch i386 -arch i386 -install_name /opt/birdfont/lib/libgcrypt.11.dylib -compatibility_version 19 -current_version 19.0 -Wl,-single_module ld: duplicate symbol __gcry_mpih_add_1 in .libs/libgcrypt.lax/libmpi.a /mpi-add.o and .libs/libgcrypt.lax/libmpi.a/ec.o make[2]: *** [libgcrypt.la] Error 1 make[2]: Leaving directory `/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0' make: *** [all] Error 2 make: Leaving directory `/opt/birdfont/var/macports/build/_opt_birdfont_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_libgcrypt/libgcrypt/work/libgcrypt-1.5.0' -- Ticket URL: <https://trac.macports.org/ticket/39640> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #37089: cgit @0.9.0.3_0 Warning: Violation by /usr -- Warning: cgit violates the layout of the ports-filesystems!
by MacPorts 02 Sep '14

02 Sep '14

#37089: cgit @0.9.0.3_0 Warning: Violation by /usr -- Warning: cgit violates the layout of the ports-filesystems! ------------------------------------------+-------------------------------- Reporter: peter.hillerstrom+macports@… | Owner: macports-tickets@… Type: defect | Status: new Priority: High | Milestone: Component: ports | Version: 2.1.2 Keywords: violation, ports-filesystems | Port: cgit ------------------------------------------+-------------------------------- When doing {{{port -u upgrade outdated}}}, I noticed an error in cgit port: {{{ ---> Computing dependencies for cgit ---> Fetching archive for cgit ---> Attempting to fetch cgit-0.9.0.3_0.darwin_10.x86_64.tbz2 from http://lil.fr.packages.macports.org/cgit ---> Attempting to fetch cgit-0.9.0.3_0.darwin_10.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/cgit ---> Attempting to fetch cgit-0.9.0.3_0.darwin_10.x86_64.tbz2 from http://packages.macports.org/cgit ---> Fetching distfiles for cgit ---> Attempting to fetch cgit-0.9.0.3.tar.bz2 from http://lil.fr.distfiles.macports.org/git-core ---> Attempting to fetch git-1.7.4.tar.bz2 from http://lil.fr.distfiles.macports.org/git-core ---> Verifying checksum(s) for cgit ---> Extracting cgit ---> Configuring cgit ---> Building cgit ---> Staging cgit into destroot Warning: violation by /usr Warning: cgit violates the layout of the ports-filesystems! Warning: Please fix or indicate this misbehavior (if it is intended), it will be an error in future releases! ---> Installing cgit @0.9.0.3_0 ---> Cleaning cgit ---> Computing dependencies for cgit ---> Deactivating cgit @0.8.2.1_1 ---> Cleaning cgit ---> Activating cgit @0.9.0.3_0 ---> Cleaning cgit ---> Uninstalling cgit @0.8.2.1_1 Error: org.macports.uninstall for port cgit returned: error deleting "/opt/local/var/macports/software/cgit/0.8.2.1_1": directory not empty Please see the log file for port cgit for details: /opt/local/var/macports/logs/_opt_local_var_macports_registry_portfiles_cgit_0.8.2.1_1/cgit/main.log Warning: Failed to execute portfile from registry for cgit @0.8.2.1_1 ---> Uninstalling cgit @0.8.2.1_1 Error: Uninstall cgit @0.8.2.1_1 failed: error deleting "/opt/local/var/macports/software/cgit/0.8.2.1_1": directory not empty To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets 91-157-48-10# port contents cgit Port cgit contains: /opt/local/etc/cgitrc.sample /opt/local/var/cache/cgit/.turd_cgit /opt/local/www/data/cgit/cgit.cgi /opt/local/www/data/cgit/cgit.css /opt/local/www/data/cgit/cgit.png /usr/lib/cgit/filters/commit-links.sh /usr/lib/cgit/filters/syntax-highlighting.sh 91-157-48-10# port contents cgit(a)0.9.0.3_0 Port cgit contains: /opt/local/etc/cgitrc.sample /opt/local/var/cache/cgit/.turd_cgit /opt/local/www/data/cgit/cgit.cgi /opt/local/www/data/cgit/cgit.css /opt/local/www/data/cgit/cgit.png /usr/lib/cgit/filters/commit-links.sh /usr/lib/cgit/filters/syntax-highlighting.sh 91-157-48-10# port contents cgit(a)0.8.2.1_1 Port cgit contains: /opt/local/etc/cgitrc.sample /opt/local/var/cache/cgit/.turd_cgit /opt/local/www/data/cgit/cgit.cgi /opt/local/www/data/cgit/cgit.css /opt/local/www/data/cgit/cgit.png /usr/lib/cgit/filters/commit-links.sh /usr/lib/cgit/filters/syntax-highlighting.sh }}} -- Ticket URL: <https://trac.macports.org/ticket/37089> MacPorts <http://www.macports.org/> Ports system for Mac OS

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