December 2015 - macports-tickets - lists.macosforge.org

[MacPorts] #49944: mariadb 10.0.19 upgrade
by MacPorts 09 Dec '15

09 Dec '15

#49944: mariadb 10.0.19 upgrade -------------------------+--------------------------------- Reporter: patrixgdd@… | Owner: macports-tickets@… Type: request | Status: new Priority: Normal | Milestone: MacPorts Future Component: ports | Version: 2.3.4 Keywords: mariadb | Port: mariadb-10.0-server -------------------------+--------------------------------- Hi, Could someone please upgrade the mariadb to the latest version (current version 10.0.22)? This is still 10.0.19 for months. Thank you -- Ticket URL: <https://trac.macports.org/ticket/49944> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49044: Patch/Update procmail because of CVE-2014-3618
by MacPorts 09 Dec '15

09 Dec '15

#49044: Patch/Update procmail because of CVE-2014-3618 ----------------------+-------------------------------- Reporter: sierkb@… | Owner: macports-tickets@… Type: update | Status: new Priority: High | Milestone: Component: ports | Version: Keywords: security | Port: procmail ----------------------+-------------------------------- CVE-2014-3618: ''Heap-based buffer overflow in formisc.c in formail in procmail 3.22 allows remote attackers to cause a denial of service (crash) and possibly execute arbitrary code via a crafted email header, related to "unbalanced quotes."''[[BR]] [https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2014-3618],[[BR]] [https://web.nvd.nist.gov/view/vuln/detail?vulnId=CVE-2014-3618] Since Apple hast removed procmail from OS X since OS X 10.11 (see [https://support.apple.com/de-de/HT205267] a most recent and security patched procmail provided by MacPorts might be wise. Homebrew already has reacted accordingly: [https://github.com/Homebrew/homebrew/pull/43686] -- Ticket URL: <https://trac.macports.org/ticket/49044> MacPorts <https://www.macports.org/> Ports system for OS X

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Re: [MacPorts] #40644: sudo: fails to switch to other user than root
by MacPorts 09 Dec '15

09 Dec '15

#40644: sudo: fails to switch to other user than root ------------------------------+----------------------------- Reporter: Peter.Danecek@… | Owner: youvegotmoxie@… Type: defect | Status: closed Priority: Normal | Milestone: Component: ports | Version: Resolution: fixed | Keywords: haspatch Port: sudo | ------------------------------+----------------------------- Changes (by cal@…): * status: new => closed * resolution: => fixed Comment: Committed in r143281. -- Ticket URL: <https://trac.macports.org/ticket/40644#comment:15> MacPorts <https://www.macports.org/> Ports system for OS X

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Re: [MacPorts] #44346: Selfupdate fails with Undefined symbols for architecture x86_64: "_rl_username_completion_function"
by MacPorts 09 Dec '15

09 Dec '15

#44346: Selfupdate fails with Undefined symbols for architecture x86_64: "_rl_username_completion_function" ---------------------------------+-------------------------------- Reporter: bugmail-macports@… | Owner: macports-tickets@… Type: defect | Status: closed Priority: Normal | Milestone: Component: base | Version: 2.3.1 Resolution: worksforme | Keywords: Port: | ---------------------------------+-------------------------------- Comment (by cal@…): Replying to [comment:7 manuel.nuno.melo@…]: > Making /usr/bin/cc point to /usr/bin/gcc solved the problem. Note that on any recent version of OS X is actually a symlink to clang. -- Ticket URL: <https://trac.macports.org/ticket/44346#comment:8> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49931: mysql56 @5.6.27_0: update to 5.6.28
by MacPorts 09 Dec '15

09 Dec '15

#49931: mysql56 @5.6.27_0: update to 5.6.28 ----------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: haspatch | Port: mysql56 ----------------------------+-------------------------------- mysql56 has been updated to version 5.6.28. See http://dev.mysql.com/doc/relnotes/mysql/5.6/en/news-5-6-28.html for details. -- Ticket URL: <https://trac.macports.org/ticket/49931> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49940: obsolete perls: remove perl5.8 perl5.10 perl5.12 perl5.14 from repository, update p5-graveyard
by MacPorts 09 Dec '15

09 Dec '15

#49940: obsolete perls: remove perl5.8 perl5.10 perl5.12 perl5.14 from repository, update p5-graveyard -------------------------+------------------------------------------------- Reporter: devans@… | Owner: devans@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: perl5.8 perl5.10 perl5.12 perl5.14 | p5-graveyard -------------------------+------------------------------------------------- At this point in time, perl5.14 and earlier versions can be considered obsolete and can be removed * perl module support for these versions has already been removed (r130129 2014-12-27) * no other ports depend on them * no other ports have perl variants that refer to them Unless someone can come up with a good reason not to do so, I propose to remove these ports at years end and add them to the mausoleum section of p5-graveyard declaring them obsolete, replaced by perl5.16 (the current default perl). See attached patch for proposed modifications to p5-graveyard -- Ticket URL: <https://trac.macports.org/ticket/49940> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49895: py27-scipy @0.16.1_0 +gcc5 +atlas completes install, but doesn't work: symbol not found
by MacPorts 09 Dec '15

09 Dec '15

#49895: py27-scipy @0.16.1_0 +gcc5 +atlas completes install, but doesn't work: symbol not found ------------------------------+-------------------------------- Reporter: mark.chilenski@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: py27-scipy atlas ------------------------------+-------------------------------- I have installed py27-scipy @0.16.1_0 +gcc5 +atlas and atlas @3.10.2_2 +gcc5. Both packages seem to have installed with no visible errors, but when I try to use scipy.linalg, the following exception occurs: {{{ >>> import scipy.linalg Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/__init__.py", line 172, in <module> from .misc import * File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/misc.py", line 6, in <module> from .lapack import get_lapack_funcs File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/lapack.py", line 356, in <module> from scipy.linalg import _flapack ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/_flapack.so, 2): Symbol not found: _cgegv_ Referenced from: /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/_flapack.so Expected in: flat namespace in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/_flapack.so }}} Possibly relevant: _cgegv_ appears to be listed as Undefined in _flapack.so: {{{ $ nm /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/linalg/_flapack.so | grep _cgegv_ U _cgegv_ }}} Is it possible that there is a mis-match between the MacPorts versions of SciPy and ATLAS? Or is something messed up in the build/linking step that causes _cgegv_ to not be found? For reference, I am running OS X 10.11.1 El Capitan and MacPorts 2.3.4. Thank you for your attention to this matter! -- Ticket URL: <https://trac.macports.org/ticket/49895> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #45617: abinit 7.8.2: use of port groups
by MacPorts 09 Dec '15

09 Dec '15

#45617: abinit 7.8.2: use of port groups -------------------------+-------------------------------- Reporter: cram5431@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.2 Keywords: | Port: abinit -------------------------+-------------------------------- I have seen that the ABINIT port was updated some time ago to the 7.8.2 version from the portfile of the version 7.4.3 (see [125582]). It is suggested that we could use the compiler and MPI port groups. I had already done this work in the ticket #42926 (which was closed prematurely) proposing an update to version 7.6.2. In addition this portfile seemed much more portable (in my tests). Suggestion: merge #42926 in ABINIT 7.8.2 ? -- Ticket URL: <https://trac.macports.org/ticket/45617> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49610: sbcl 1.3 fails to build
by MacPorts 09 Dec '15

09 Dec '15

#49610: sbcl 1.3 fails to build -----------------------+-------------------------------- Reporter: glen@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: elcapitan | Port: sbcl -----------------------+-------------------------------- sbcl 1.3 fails to build on Mac Pro (Late 2013), OS X 10.11.1. Log file is attached. -- Ticket URL: <https://trac.macports.org/ticket/49610> MacPorts <https://www.macports.org/> Ports system for OS X

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Re: [MacPorts] #36355: vim: outdated runtime files
by MacPorts 09 Dec '15

09 Dec '15

#36355: vim: outdated runtime files --------------------------+---------------------- Reporter: pengyu.ut@… | Owner: raimue@… Type: defect | Status: closed Priority: Normal | Milestone: Component: ports | Version: 2.1.2 Resolution: fixed | Keywords: Port: vim | --------------------------+---------------------- Changes (by raimue@…): * status: assigned => closed * resolution: => fixed Comment: Fixed by switching to GitHub as upstream in r143266. See also #49712. -- Ticket URL: <https://trac.macports.org/ticket/36355#comment:4> MacPorts <https://www.macports.org/> Ports system for OS X

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