March 2015 - macports-tickets - lists.macosforge.org

[MacPorts] #46036: octave-netcdf
by MacPorts 11 Apr '15

11 Apr '15

#46036: octave-netcdf ---------------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: submission | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: haspatch maintainer | Port: octave-netcdf ---------------------------------+-------------------------------- I've crated a port of octave-netcdf. {{{ A MATLAB compatible NetCDF interface for Octave. }}} -- Ticket URL: <https://trac.macports.org/ticket/46036> MacPorts <https://www.macports.org/> Ports system for OS X

1 2

[MacPorts] #47190: openssh @6.7p1_0: update to 6.8p1
by MacPorts 07 Apr '15

07 Apr '15

#47190: openssh @6.7p1_0: update to 6.8p1 ----------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: haspatch | Port: openssh ----------------------------+-------------------------------- openssh has been updated to version 6.8p1. See http://www.openssh.com/txt/release-6.8 for details. -- Ticket URL: <https://trac.macports.org/ticket/47190> MacPorts <https://www.macports.org/> Ports system for OS X

1 5

[MacPorts] #47299: Update Xcode on buildbot builders
by MacPorts 06 Apr '15

06 Apr '15

#47299: Update Xcode on buildbot builders ----------------------------+--------------------- Reporter: ryandesign@… | Owner: admin@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: server/hosting | Version: Keywords: | Port: ----------------------------+--------------------- Could you please check on the 10.7 and 10.8 buildbot builders which versions of Xcode and the Xcode command line tools are installed, and update them if they're outdated? I'd like them to be at the latest versions. For the 10.7 builder that would be Xcode 4.6.3, and for the 10.8 builder that would be Xcode 5.1.1. After updating Xcode, the corresponding Xcode command line tools should be installed. If you're installing Xcode via the Mac App Store, the command line tools update may simply be suggested in the App Store updates. If you're installing Xcode by manually downloading it from the Apple developer web site, then you'll need to manually download and install the corresponding command line tools. If you need help identifying which version that is, let me know and I'll look it up. -- Ticket URL: <https://trac.macports.org/ticket/47299> MacPorts <https://www.macports.org/> Ports system for OS X

1 5

[MacPorts] #46595: Installation of poppler on Yosemite hangs in configure
by MacPorts 06 Apr '15

06 Apr '15

#46595: Installation of poppler on Yosemite hangs in configure ---------------------------------+-------------------------------- Reporter: jacek.radzikowski@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: poppler ---------------------------------+-------------------------------- Installation of poppler on OSX Yosemite hangs in configure. I tried to remove macports and install again, upgrade all components, but it did not fix the problem. This are the messages printed on the terminal by port -v install: {{{ $ sudo /opt/local/bin/port -v install poppler ---> Computing dependencies for poppler. ---> Fetching archive for poppler ---> poppler-0.29.0_0.darwin_14.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified ---> Attempting to fetch poppler-0.29.0_0.darwin_14.x86_64.tbz2 from http://packages.macports.org/poppler % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0---> Attempting to fetch poppler-0.29.0_0.darwin_14.x86_64.tbz2 from http://lil.fr.packages.macports.org/poppler % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0---> Attempting to fetch poppler-0.29.0_0.darwin_14.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/poppler % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 287 100 287 0 0 824 0 --:--:-- --:--:-- --:--:-- 827 ---> Fetching distfiles for poppler ---> Verifying checksums for poppler ---> Checksumming poppler-0.29.0.tar.xz ---> Extracting poppler ---> Extracting poppler-0.29.0.tar.xz ---> Patching configure.ac: s:-fno-check-new::g ---> Configuring poppler autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: glibtoolize --copy --force glibtoolize: putting auxiliary files in '.'. glibtoolize: copying file './ltmain.sh' glibtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. glibtoolize: copying file 'm4/libtool.m4' glibtoolize: copying file 'm4/ltoptions.m4' glibtoolize: copying file 'm4/ltsugar.m4' glibtoolize: copying file 'm4/ltversion.m4' glibtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: running: /opt/local/bin/autoconf --force autoreconf: running: /opt/local/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:12: installing './compile' configure.ac:9: installing './missing' cpp/Makefile.am: installing './depcomp' autoreconf: Leaving directory `.' checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk }}} Logfile (attached) does not show any error messages. -- Ticket URL: <https://trac.macports.org/ticket/46595> MacPorts <https://www.macports.org/> Ports system for OS X

1 8

[MacPorts] #45927: py32-numpy broken by py32-cython move to python-graveyard
by MacPorts 05 Apr '15

05 Apr '15

#45927: py32-numpy broken by py32-cython move to python-graveyard ---------------------+------------------------- Reporter: ionic@… | Owner: michaelld@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: py32-numpy ---------------------+------------------------- `py32-numpy` is currently broken after `py32-cython`s move to the python- graveyard. Please evaluate whether it is possible to move `py32-numpy` there as well. There are quite a few packages depending on `py*-numpy`, but none so explicitly. That doesn't mean that there none, however, as many ports generate python dependencies automatically from a list of given versions. -- Ticket URL: <https://trac.macports.org/ticket/45927> MacPorts <https://www.macports.org/> Ports system for OS X

1 4

[MacPorts] #45650: mailman 2.1.18-1
by MacPorts 05 Apr '15

05 Apr '15

#45650: mailman 2.1.18-1 ---------------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.2 Keywords: haspatch maintainer | Port: mailman ---------------------------------+-------------------------------- mailman has been updated to version 2.1.18-1. * Updated python dependency to version 2.7 * Added py27-dnspython dependency * Added livecheck * Changed shall to sha 256 hash * Cleaned up whitespace * Assumed maintainership -- Ticket URL: <https://trac.macports.org/ticket/45650> MacPorts <https://www.macports.org/> Ports system for OS X

1 3

[MacPorts] #47174: [Port Abandoned] cfourcc
by MacPorts 05 Apr '15

05 Apr '15

#47174: [Port Abandoned] cfourcc --------------------+-------------------------- Reporter: petr@… | Owner: petr.vacek@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: cfourcc --------------------+-------------------------- The port seems to be abandoned. It was last touched in r36131 and is probably completely outdated. The upstream site is offline and Ticket #45769 was ignored for 4 month. Probably this port is not used very much any more and could be removed. -- Ticket URL: <https://trac.macports.org/ticket/47174> MacPorts <https://www.macports.org/> Ports system for OS X

1 2

[MacPorts] #47278: Remove dependency on perl5.16 from texinfo
by MacPorts 05 Apr '15

05 Apr '15

#47278: Remove dependency on perl5.16 from texinfo -------------------------+-------------------------------- Reporter: cmc@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: texinfo -------------------------+-------------------------------- The texinfo port claims to be dependent on perl5.16, but should work fine with any perl5. Attached is a patch to make the dependency on the higher-level perl package and the default perl binary (link to current perl). -- Ticket URL: <https://trac.macports.org/ticket/47278> MacPorts <https://www.macports.org/> Ports system for OS X

1 2

[MacPorts] #47276: Scipy packages not importing ("cannot import" .integrate, .specfun, .special, .sparse)
by MacPorts 03 Apr '15

03 Apr '15

#47276: Scipy packages not importing ("cannot import" .integrate, .specfun, .special, .sparse) ---------------------------------------------+----------------------------- Reporter: alison.mansheim@… | Owner: macports- Type: defect | tickets@… Priority: Normal | Status: new Component: ports | Milestone: Keywords: scipy, import, special, specfun | Version: 2.3.3 | Port: scipy ---------------------------------------------+----------------------------- I have had this problem with every version of scipy I've tried since 0.14.0 (currently am running the latest 15.1). Each time scipy and dependencies installed cleanly using macports for py27 on mac OSX 10.6.8. After upgrading to 0.14.0, some of the functions will not import ( those inside scipy.integrate, .specfun, .special, .sparse). I tried uninstalling and re-installing everything and still no luck. I found some older threads that reported a similar problem for older versions, but then closed because they were fixed in an upgrade. For example, when I run a function that uses scipy.integrate.quad(): In [10]: cosmo.ProjectedLength(0.5) --------------------------------------------------------------------------- AttributeError Traceback (most recent call last) <ipython-input-10-38d57df266ec> in <module>() ----> 1 cosmo.ProjectedLength(0.5) /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/cluster_tools/cosmo.pyc in ProjectedLength(z, h, Om, Ol) 58 Assumes small angles (i.e.: Da*Theta = Projected Length, i.e. sin(Theta)=Theta) 59 """ ---> 60 return Da(z,h,Om,Ol)/3437.75 #given that 1 radian = 3437.75 arcminutes 61 62 def lensgeo(zl,zs,h=0.7,Om=0.3,Ol=0.7): /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/cluster_tools/cosmo.pyc in Da(z, h, Om, Ol) 38 Returns the cosmological angular diameter distance (in units of Mpc) 39 """ ---> 40 f0 = scipy.integrate.quad(lambda x: chi(x,Om,Ol),0,z)[0] 41 #f0 = Integral(chi(x,Om,Ol),(x,0,z)) 42 da = c/(100.0*h)/(1+z)*f0.n() AttributeError: 'module' object has no attribute 'integrate' When I try to import one of the packages I also get an error: In [15]: import scipy.integrate --------------------------------------------------------------------------- ImportError Traceback (most recent call last) <ipython-input-15-4d37fa311919> in <module>() ----> 1 import scipy.integrate /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/integrate/__init__.py in <module>() 49 from __future__ import division, print_function, absolute_import 50 ---> 51 from .quadrature import * 52 from .odepack import * 53 from .quadpack import * /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/integrate/quadrature.py in <module>() 4 'cumtrapz','newton_cotes'] 5 ----> 6 from scipy.special.orthogonal import p_roots 7 from scipy.special import gammaln 8 from numpy import sum, ones, add, diff, isinf, isscalar, \ /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 /site-packages/scipy/special/__init__.py in <module>() 547 548 from .basic import * --> 549 from . import specfun 550 from . import orthogonal 551 from .orthogonal import * ImportError: cannot import name specfun I looked in the scipy directories and the /integrate/quadrature.pyc and special/orthogonal.pyc and /special/specfun.so exist. I had similar problems that I traced to other .so's, so I thought there was an issue with my compiler, but I thought macports would have detected this. I did not have this problem with older versions of scipy. I posted this problem on scipy git and they replied "You can try asking the macports people for support with their Scipy packaging." I would appreciate any help you can offer! There are a lot of useful packages that rely on these functions. Thank you, Alison -- Ticket URL: <https://trac.macports.org/ticket/47276> MacPorts <https://www.macports.org/> Ports system for OS X

1 16

[MacPorts] #46618: [Port Abandoned] p5-xml-parser
by MacPorts 02 Apr '15

02 Apr '15

#46618: [Port Abandoned] p5-xml-parser --------------------+--------------------------- Reporter: mf2k@… | Owner: mjg@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: p5-xml-parser --------------------+--------------------------- The maintainer of p5-xml-parser has not been [search:mjg@phoenixtrap.com active in 7 years]. -- Ticket URL: <https://trac.macports.org/ticket/46618> MacPorts <https://www.macports.org/> Ports system for OS X

1 1