January 2016 - macports-tickets - lists.macosforge.org

[MacPorts] #50329: gimp2: build fails on 10.6 (error: redefinition of typedef 'boolean' is invalid in C)
by MacPorts 14 Jan '16

14 Jan '16

#50329: gimp2: build fails on 10.6 (error: redefinition of typedef 'boolean' is invalid in C) -------------------------+--------------------------- Reporter: mojca@… | Owner: devans@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: snowleopard | Port: gimp2, libmng -------------------------+--------------------------- The [https://build.macports.org/builders/buildports-snowleopard- x86_64/builds/39762 buildbot] fails with: {{{ In file included from file-mng.c:87: In file included from /opt/local/include/libmng.h:385: /opt/local/include/libmng_types.h:208:13: error: redefinition of typedef 'boolean' is invalid in C [-Wtypedef-redefinition] typedef int boolean; ^ }}} (Ticket #38063 with the same subject seems to be unrelated.) -- Ticket URL: <https://trac.macports.org/ticket/50329> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50217: port for marx - the Chandra X-ray observatory ray-trace program
by MacPorts 14 Jan '16

14 Jan '16

#50217: port for marx - the Chandra X-ray observatory ray-trace program -------------------------------+-------------------------------- Reporter: moritz.guenther@… | Owner: macports-tickets@… Type: submission | Status: new Priority: Normal | Milestone: MacPorts Future Component: ports | Version: 2.3.4 Keywords: science | Port: marx -------------------------------+-------------------------------- marx is a suite of programs to simulate the Chandra X-ray observatory used by hundreds of astronomers. marx is used to analyze scientific results or to plan observations. In my day job I'm the main developer of marx. It is our policy not to distribute binaries, but building marx on Mac OS X has pitfalls. Thus, I want to help users by getting marx into MacPorts. I will maintain this port privately in my free time, not as part of my job. Thus, the "maintainer email" is my private address. -- Ticket URL: <https://trac.macports.org/ticket/50217> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50310: p5-musicbrainz-discid: patch fails
by MacPorts 14 Jan '16

14 Jan '16

#50310: p5-musicbrainz-discid: patch fails ---------------------+----------------------------------- Reporter: mojca@… | Owner: khindenburg@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: p5-musicbrainz-discid ---------------------+----------------------------------- patching `p5-musicbrainz-discid` fails with: {{{ ---> Extracting p5-musicbrainz-discid DEBUG: Executing org.macports.extract (p5-musicbrainz-discid) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: patch phase started at Tue Jan 12 14:12:41 PST 2016 DEBUG: Executing org.macports.patch (p5-musicbrainz-discid) ---> Applying patches to p5-musicbrainz-discid ---> Applying pod-encoding.patch DEBUG: Creating patch directory: /opt/local/var/macports/build/_opt_mports_dports_perl_p5-musicbrainz- discid/p5-musicbrainz-discid/work/MusicBrainz-DiscID-0.03 DEBUG: Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_mports_dports_perl_p5 -musicbrainz-discid/p5-musicbrainz-discid/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.8' DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_opt_mports_dports_perl_p5-musicbrainz- discid/p5-musicbrainz-discid/work/MusicBrainz-DiscID-0.03" && /usr/bin/patch -p1' DEBUG: Executing command line: cd "/opt/local/var/macports/build/_opt_mports_dports_perl_p5-musicbrainz- discid/p5-musicbrainz-discid/work/MusicBrainz-DiscID-0.03" && /usr/bin/patch -p1 < '/opt/mports/dports/perl/p5-musicbrainz-discid/files /pod-encoding.patch' can't find file to patch at input line 11 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- |Description: use plain ascii apostrophe |Origin: vendor |Bug: https://rt.cpan.org/Ticket/Display.html?id=85212 |Bug-Debian: http://bugs.debian.org/708079 |Forwarded: https://rt.cpan.org/Ticket/Display.html?id=85212 |Author: gregor herrmann <gregoa(a)debian.org> |Last-Update: 2013-05-13 | |--- a/lib/MusicBrainz/DiscID.pm |+++ b/lib/MusicBrainz/DiscID.pm -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored Command failed: cd "/opt/local/var/macports/build/_opt_mports_dports_perl_p5-musicbrainz- discid/p5-musicbrainz-discid/work/MusicBrainz-DiscID-0.03" && /usr/bin/patch -p1 < '/opt/mports/dports/perl/p5-musicbrainz-discid/files /pod-encoding.patch' Exit code: 1 Error: org.macports.patch for port p5-musicbrainz-discid returned: command execution failed DEBUG: Error code: CHILDSTATUS 66740 1 DEBUG: Backtrace: command execution failed while executing "system $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec patch "" "< '$patch'"" (procedure "portpatch::patch_main" line 35) invoked from within "portpatch::patch_main org.macports.patch" ("eval" body line 1) invoked from within "eval $procedure $targetname" Warning: targets not executed for p5-musicbrainz-discid: org.macports.activate org.macports.patch org.macports.configure org.macports.build org.macports.destroot org.macports.install Please see the log file for port p5-musicbrainz-discid for details: /opt/local/var/macports/logs/_opt_mports_dports_perl_p5-musicbrainz- discid/p5-musicbrainz-discid/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port p5-musicbrainz-discid failed failure ---> Cleaning p5-musicbrainz-discid }}} I'm attaching the patch that could fix that (even though I'm not exactly sure why the failure). -- Ticket URL: <https://trac.macports.org/ticket/50310> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50318: R @3.2.2: update to 3.2.3
by MacPorts 14 Jan '16

14 Jan '16

#50318: R @3.2.2: update to 3.2.3 ---------------------------------+-------------------------------- Reporter: kjell.konis@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: haspatch maintainer | Port: R ---------------------------------+-------------------------------- Pretty straight forward this time. Summary says it all. -- Ticket URL: <https://trac.macports.org/ticket/50318> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50297: gpsbabel: update to 1.5.3
by MacPorts 14 Jan '16

14 Jan '16

#50297: gpsbabel: update to 1.5.3 ----------------------+-------------------------------- Reporter: mp@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: haspatch | Port: gpsbabel ----------------------+-------------------------------- gpsbabel updated to 1.5.3 (gpsbabel has moved to github) Builds fine both universal and non-universal on Mavericks. -- Ticket URL: <https://trac.macports.org/ticket/50297> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47759: gpsbabel @1.5.2 installs nothing in destroot
by MacPorts 14 Jan '16

14 Jan '16

#47759: gpsbabel @1.5.2 installs nothing in destroot -----------------------+-------------------------------- Reporter: florian@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: gpsbabel -----------------------+-------------------------------- {{{ ---> Staging gpsbabel into destroot . changed gid expected 0 found 80 modified ./usr missing (created) . missing (directory not created: File exists) ./Applications missing (created) ./Developer missing (created) ./Library missing (created) . changed gid expected 80 found 0 modified ./bin missing (created) ./etc missing (created) ./include missing (created) ./lib missing (created) ./lib/pkgconfig missing (created) ./libexec missing (created) ./sbin missing (created) ./share missing (created) }}} Just the items from post-destroot are installed: {{{ port contents gpsbabel Port gpsbabel contains: /opt/local/share/doc/gpsbabel/AUTHORS /opt/local/share/doc/gpsbabel/COPYING /opt/local/share/doc/gpsbabel/README.contrib /opt/local/share/doc/gpsbabel/README.igc /opt/local/share/doc/gpsbabel/README.mapconverter /opt/local/share/doc/gpsbabel/README.xmapwpt }}} -- Ticket URL: <https://trac.macports.org/ticket/47759> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50307: 404 Not Found when installing py27-astropy
by MacPorts 14 Jan '16

14 Jan '16

#50307: 404 Not Found when installing py27-astropy ------------------------+-------------------------------- Reporter: stringph@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: py27-astropy ------------------------+-------------------------------- (User's first ticket.) When trying to install py27-astropy I get {{{ ---> Fetching archive for py27-astropy ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/py27-astropy ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://lil.fr.packages.macports.org/py27-astropy ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/py27-astropy ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://packages.macports.org/py27-astropy ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://jog.id.packages.macports.org/macports/packages/py27-astropy Error: org.macports.archivefetch for port py27-astropy returned: archivefetch failed for py27-astropy @1.1.1_1 }}} The log file shows {{{ :msg:archivefetch ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/py27-astropy :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :msg:archivefetch ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://lil.fr.packages.macports.org/py27-astropy :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :msg:archivefetch ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/py27-astropy :debug:archivefetch Fetching archive failed:: The requested URL returned error: 500 Internal Server Error :msg:archivefetch ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://packages.macports.org/py27-astropy :debug:archivefetch Fetching archive failed:: The requested URL returned error: 500 Internal Server Error :msg:archivefetch ---> Attempting to fetch py27-astropy-1.1.1_1.darwin_14.x86_64.tbz2 from http://jog.id.packages.macports.org/macports/packages/py27-astropy :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :error:archivefetch org.macports.archivefetch for port py27-astropy returned: archivefetch failed for py27-astropy @1.1.1_1 }}} i.e. it just isn't there .. ? -- Ticket URL: <https://trac.macports.org/ticket/50307> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50283: py-scipy @0.16.1 +atlas build failure due to new atlas variants
by MacPorts 14 Jan '16

14 Jan '16

#50283: py-scipy @0.16.1 +atlas build failure due to new atlas variants -----------------------+-------------------------------- Reporter: chanmhy@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: py-scipy -----------------------+-------------------------------- The new revision of the atlas port released 7 weeks ago removes the +clang variant from the build. Instead, it defaults to that build if you don't specify any options. As a result, it is now impossible to build py-scipy with the +atlas variant. Please see the attached log for more info. -- Ticket URL: <https://trac.macports.org/ticket/50283> MacPorts <https://www.macports.org/> Ports system for OS X

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Re: [MacPorts] #43741: cpan fails to install any module
by MacPorts 13 Jan '16

13 Jan '16

#43741: cpan fails to install any module -----------------------------+-------------------------------- Reporter: me@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Resolution: | Keywords: Port: perl5 perl5.16 | -----------------------------+-------------------------------- Comment (by devans@…): Then you probably need to run cpan with sudo. The following works for me. {{{ sudo port install perl5 }}} which gives {{{ $ which perl cpan /opt/local/bin/perl /opt/local/bin/cpan $ perl -v This is perl 5, version 22, subversion 1 (v5.22.1) built for darwin- thread-multi-2level ... $ cpan -v /opt/local/bin/cpan script version 1.63, CPAN.pm version 2.11 }}} so I won't bother with the 5.22 suffix stuff. If I then run {{{ sudo cpan }}} I can install whatever I like and it gets installed into the perl5.22 site path {{{ /opt/local/lib/perl5/site_perl/5.22 }}} MacPorts modules install into the vendor path {{{ /opt/local/lib/perl5/vendor_perl/5.22 }}} and core modules are in the main path {{{ /opt/local/lib/perl5/5.22 }}} So CPAN, MacPorts and CPAN can all have the same module installed without conflict Looking at @INC {{{ perl -e "print join(\"\n\", @INC), \"\n\"" /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level /opt/local/lib/perl5/site_perl/5.22 /opt/local/lib/perl5/vendor_perl/5.22/darwin-thread-multi-2level /opt/local/lib/perl5/vendor_perl/5.22 /opt/local/lib/perl5/5.22/darwin-thread-multi-2level /opt/local/lib/perl5/5.22 . }}} you can see, from the search order, that MacPort's vendor installed modules will override core, but CPAN's site installed modules will override MacPort's. So if you have all three installed CPAN wins. Using the very useful [https://raw.githubusercontent.com/mklement0/whichpm/stable/bin/whichpm whichpm script], if I install Net::FTP, which is a core module, using both MacPorts and CPAN I see {{{ $ whichpm Net::FTP whichpm: WARNING: DUPLICATE module files found for 'Net::FTP': /opt/local/lib/perl5/vendor_perl/5.22/Net/FTP.pm (from p5-net) /opt/local/lib/perl5/5.22/Net/FTP.pm (from core) /opt/local/lib/perl5/site_perl/5.22/Net/FTP.pm (from cpan) }}} the last one is the version that perl will load due to the @INC search order. -- Ticket URL: <https://trac.macports.org/ticket/43741#comment:10> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50245: Remove modules for perl 5.16, 5.18 (and 5.20?)
by MacPorts 13 Jan '16

13 Jan '16

#50245: Remove modules for perl 5.16, 5.18 (and 5.20?) -------------------------+-------------------------------- Reporter: mojca@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: perl5 p5-graveyard -------------------------+-------------------------------- Here's a list of things we have to do (please add the missing items): * empty the `p5-graveyard` port; we no longer need replacements for 5.8-5.14 * decide whether to keep or remove support for 5.20 (if we wait long enough with the ticket, 5.24 will be out anyway, so we may just as well remove 5.20 now :); on the other hand that should not mean removing all perl5 variants just because there will be a single perl left until introduction of 5.24 * close #48365 * potentially collect a list of affected ports and warn maintainers (maybe try to make sure that we don't add a huge number of CC-ed users that will want to unsubscribe straight away while we still discuss what to do) * handle `subversion-perlbindings` * remove 5.16-5.x from `perl5.branches` from ports with variants * remove 5.16-5.x from all `p5-foo` modules * fill in the `p5-graveyard` port * (potential removal of `perl5.x` itself can wait) -- Ticket URL: <https://trac.macports.org/ticket/50245> MacPorts <https://www.macports.org/> Ports system for OS X

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