#41898: error installing metis ------------------------+-------------------------------- Reporter: mfadams@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: metis | ------------------------+-------------------------------- Changes (by macsforever2000@…): * keywords: Octave => * port: => metis Old description:
I get this error when I try to install Octave. I have OSX 10.8.5 and XCode 5.0.2. Any ideas? Thanks, Mark
12:56 ~$ sudo port install octave +atlas+docs Warning: No port clang found in the index. ---> Computing dependencies for octave ---> Dependencies to be installed: SuiteSparse metis arpack atlas clang-3.3 clang_select ld64 llvm-3.3 llvm_select gcc48 cctools cctools- headers cloog isl gcc_select libgcc epstool fftw-3-single gnuplot aquaterm pdflib wxWidgets-3.0 wxWidgets_select grep hdf5-18 less pstoedit ImageMagick djvulibre urw-fonts plotutils qhull qrupdate ---> Configuring metis Error: org.macports.configure for port metis returned: configure failure: command execution failed Error: Failed to install metis Please see the log file for port metis for details: /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log Error: The following dependencies were not installed: SuiteSparse metis arpack atlas clang-3.3 clang_select ld64 llvm-3.3 llvm_select gcc48 cctools cctools-headers cloog isl gcc_select libgcc epstool fftw-3-single gnuplot aquaterm pdflib wxWidgets-3.0 wxWidgets_select grep hdf5-18 less pstoedit ImageMagick djvulibre urw-fonts plotutils qhull qrupdate To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port octave failed 12:56 1 ~$ cat /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log version:1 :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 503 :debug:main Executing org.macports.main (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.archivefetch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:configure configure phase started at Mon Dec 23 12:56:39 EST 2013 :notice:configure ---> Configuring metis :debug:configure Using compiler 'Xcode Clang' :debug:configure Executing proc-pre-org.macports.configure-configure-0 :debug:configure Executing org.macports.configure (metis) :debug:configure Environment: CPATH='/opt/local/include' CFLAGS='-pipe -Os -mtune=native' CPPFLAGS='-I/opt/local/include -mtune=native' CXXFLAGS='-pipe -Os -mtune=native' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.8' CXX='clang++' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -Os -mtune=native' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names' __CFPREFERENCES_AVOID_DAEMON='1' FCFLAGS='-pipe -Os -mtune=native' OBJC='clang' OBJCXX='/usr/bin/clang++' INSTALL='/usr/bin/install -c' OBJCFLAGS='-pipe -Os' OBJCXXFLAGS='-pipe -Os' FFLAGS='-pipe -Os -mtune=native' CC_PRINT_OPTIONS='YES' CC='clang' :debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/' :debug:configure Executing command line: cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/ :info:configure -- The C compiler identification is Clang 4.0.0 :info:configure -- The CXX compiler identification is Clang 4.0.0 :info:configure CMake Error at /opt/local/share/cmake-2.8/Modules/Platform/Darwin.cmake:211 (message): :info:configure CMAKE_OSX_DEPLOYMENT_TARGET is '10.8' but CMAKE_OSX_SYSROOT: :info:configure :info:configure "/" :info:configure :info:configure is not set to a MacOSX SDK with a recognized version. Either set :info:configure CMAKE_OSX_SYSROOT to a valid SDK or set CMAKE_OSX_DEPLOYMENT_TARGET to :info:configure empty. :info:configure Call Stack (most recent call first): :info:configure /opt/local/share/cmake-2.8/Modules/CMakeSystemSpecificInformation.cmake:36 (include) :info:configure CMakeLists.txt:2 (project) :info:configure :info:configure :info:configure -- Configuring incomplete, errors occurred! :info:configure See also "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/CMakeFiles/CMakeOutput.log". :info:configure Command failed: cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/ :info:configure Exit code: 1 :error:configure org.macports.configure for port metis returned: configure failure: command execution failed :debug:configure Error code: NONE :debug:configure Backtrace: configure failure: command execution failed while executing "$procedure $targetname" :info:configure Warning: targets not executed for metis: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install :error:configure Failed to install metis :debug:configure couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" :notice:configure Please see the log file for port metis for details: /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log 12:56 ~$
New description: I get this error when I try to install Octave. I have OSX 10.8.5 and XCode 5.0.2. Any ideas? Thanks, Mark {{{ 12:56 ~$ sudo port install octave +atlas+docs Warning: No port clang found in the index. ---> Computing dependencies for octave ---> Dependencies to be installed: SuiteSparse metis arpack atlas clang-3.3 clang_select ld64 llvm-3.3 llvm_select gcc48 cctools cctools- headers cloog isl gcc_select libgcc epstool fftw-3-single gnuplot aquaterm pdflib wxWidgets-3.0 wxWidgets_select grep hdf5-18 less pstoedit ImageMagick djvulibre urw-fonts plotutils qhull qrupdate ---> Configuring metis Error: org.macports.configure for port metis returned: configure failure: command execution failed Error: Failed to install metis Please see the log file for port metis for details: /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log Error: The following dependencies were not installed: SuiteSparse metis arpack atlas clang-3.3 clang_select ld64 llvm-3.3 llvm_select gcc48 cctools cctools-headers cloog isl gcc_select libgcc epstool fftw-3-single gnuplot aquaterm pdflib wxWidgets-3.0 wxWidgets_select grep hdf5-18 less pstoedit ImageMagick djvulibre urw-fonts plotutils qhull qrupdate To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port octave failed 12:56 1 ~$ cat /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log version:1 :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 503 :debug:main Executing org.macports.main (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.archivefetch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (metis) :debug:main Privilege de-escalation not attempted as not running as root. :debug:configure configure phase started at Mon Dec 23 12:56:39 EST 2013 :notice:configure ---> Configuring metis :debug:configure Using compiler 'Xcode Clang' :debug:configure Executing proc-pre-org.macports.configure-configure-0 :debug:configure Executing org.macports.configure (metis) :debug:configure Environment: CPATH='/opt/local/include' CFLAGS='-pipe -Os -mtune=native' CPPFLAGS='-I/opt/local/include -mtune=native' CXXFLAGS='-pipe -Os -mtune=native' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.8' CXX='clang++' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -Os -mtune=native' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names' __CFPREFERENCES_AVOID_DAEMON='1' FCFLAGS='-pipe -Os -mtune=native' OBJC='clang' OBJCXX='/usr/bin/clang++' INSTALL='/usr/bin/install -c' OBJCFLAGS='-pipe -Os' OBJCXXFLAGS='-pipe -Os' FFLAGS='-pipe -Os -mtune=native' CC_PRINT_OPTIONS='YES' CC='clang' :debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/' :debug:configure Executing command line: cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/ :info:configure -- The C compiler identification is Clang 4.0.0 :info:configure -- The CXX compiler identification is Clang 4.0.0 :info:configure CMake Error at /opt/local/share/cmake-2.8/Modules/Platform/Darwin.cmake:211 (message): :info:configure CMAKE_OSX_DEPLOYMENT_TARGET is '10.8' but CMAKE_OSX_SYSROOT: :info:configure :info:configure "/" :info:configure :info:configure is not set to a MacOSX SDK with a recognized version. Either set :info:configure CMAKE_OSX_SYSROOT to a valid SDK or set CMAKE_OSX_DEPLOYMENT_TARGET to :info:configure empty. :info:configure Call Stack (most recent call first): :info:configure /opt/local/share/cmake-2.8/Modules/CMakeSystemSpecificInformation.cmake:36 (include) :info:configure CMakeLists.txt:2 (project) :info:configure :info:configure :info:configure -- Configuring incomplete, errors occurred! :info:configure See also "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/CMakeFiles/CMakeOutput.log". :info:configure Command failed: cd "/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2" && cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DGKLIB_PATH=/opt/local/var/macports/build/_Users_markadams_Codes_scienceports_math_metis/metis/work/metis-5.0.2/GKlib -DSHARED=1 -DMETIS_USE_DOUBLEPRECISION=1 -DCMAKE_OSX_ARCHITECTURES="" -DCMAKE_OSX_SYSROOT=/ :info:configure Exit code: 1 :error:configure org.macports.configure for port metis returned: configure failure: command execution failed :debug:configure Error code: NONE :debug:configure Backtrace: configure failure: command execution failed while executing "$procedure $targetname" :info:configure Warning: targets not executed for metis: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install :error:configure Failed to install metis :debug:configure couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" :notice:configure Please see the log file for port metis for details: /opt/local/var/macports/logs/_Users_markadams_Codes_scienceports_math_metis/metis/main.log 12:56 ~$ }}} -- Comment: In the future, please use WikiFormatting, and fill in the Port field of the failed port. Also, attach the complete main.log after cleaning the port instead of pasting it inline. -- Ticket URL: <https://trac.macports.org/ticket/41898#comment:1> MacPorts <http://www.macports.org/> Ports system for OS X