#35195: sextractor @2.8.6 Configure error with latest atlas ------------------------------------+--------------------------------------- Reporter: bjohnson@… | Owner: tim@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.1 Keywords: | Port: sextractor ------------------------------------+--------------------------------------- Changes (by ryandesign@…): * cc: tim@… (removed) * owner: macports-tickets@… => tim@… Old description:
On Mac 10.6.8, Xcode 3.2.6, when executing {{{sudo port upgrade outdated}}} I receive the following:
{{{Error: org.macports.configure for port sextractor returned: configure failure: command execution failed}}}
looking at the main.log yields:
{{{:info:configure checking for clapack_dpotrf in -llapack... no :info:configure checking for cblas_dgemm in -lcblas... yes :info:configure checking for clapack_dpotrf in -llapack... no :info:configure checking for cblas_dgemm in -lcblas... yes :info:configure configure: error: CBLAS/LAPack library files not found in /opt/local/lib! Exiting.}}}
so the sextractor configure is bombing. some digging suggests that this is due to the new version of atlas (@3.9.84) which has different library names. According to comments on http://okomestudio.net/biboroku/?p=824 replacing -llapack, -lcblas, -ltpcblas and -latlas in the sextractor configure file with -ltatlas should solve the problem when using recent atlas versions. It is successful if done to the configure script in the 'build/...' directories. I'm not sure how to do this in the portfile
New description: On Mac 10.6.8, Xcode 3.2.6, when executing {{{sudo port upgrade outdated}}} I receive the following: {{{ Error: org.macports.configure for port sextractor returned: configure failure: command execution failed }}} looking at the main.log yields: {{{ :info:configure checking for clapack_dpotrf in -llapack... no :info:configure checking for cblas_dgemm in -lcblas... yes :info:configure checking for clapack_dpotrf in -llapack... no :info:configure checking for cblas_dgemm in -lcblas... yes :info:configure configure: error: CBLAS/LAPack library files not found in /opt/local/lib! Exiting. }}} so the sextractor configure is bombing. some digging suggests that this is due to the new version of atlas (@3.9.84) which has different library names. According to comments on http://okomestudio.net/biboroku/?p=824 replacing -llapack, -lcblas, -ltpcblas and -latlas in the sextractor configure file with -ltatlas should solve the problem when using recent atlas versions. It is successful if done to the configure script in the 'build/...' directories. I'm not sure how to do this in the portfile -- -- Ticket URL: <https://trac.macports.org/ticket/35195#comment:1> MacPorts <http://www.macports.org/> Ports system for Mac OS