[MacPorts] #33044: port can't find R dylibs and repeatedly rebuilds

28 Jan 2012


      #33044: port can't find R dylibs and repeatedly rebuilds
--------------------------------+-------------------------------------------
 Reporter:  stephen@…           |       Owner:  macports-tickets@…                   
     Type:  defect              |      Status:  new                                  
 Priority:  Normal              |   Milestone:                                       
Component:  base                |     Version:  2.0.3                                
 Keywords:                      |        Port:                                       
--------------------------------+-------------------------------------------
 R keeps certain R-specific dylibs in its own library directory -- on my
 system it's
 {{{
 /opt/local/lib/R/lib/x86_64/
 }}}
 -- and port repeatedly rebuilds R, apparently failing with
 {{{
 --->  Computing dependencies for R
 --->  Fetching R
 --->  Verifying checksum(s) for R
 --->  Extracting R
 --->  Configuring R
 --->  Building R
 --->  Staging R into destroot
 --->  Installing R @2.14.1_0+gcc44+recommended
 --->  Activating R @2.14.1_0+gcc44+recommended
 --->  Cleaning R
 --->  Updating database of binaries: 100%
 --->  Scanning binaries for linking errors: 98%
 Warning: Could not open libRblas.dylib: Error opening or reading file

 Warning: Could not open libR.dylib: Error opening or reading file
 --->  Scanning binaries for linking errors: 100%
 --->  Found 2 broken file(s), matching files to ports
 Error: Port R is still broken after rebuiling it more than 3 times. You
 might want to file a bug for this.
 Port R still broken after rebuilding 3 time(s)
     while executing
 "error "Port [$port name] still broken after rebuilding [expr
 $broken_port_counts([$port name]) - 1] time(s)""
     (procedure "revupgrade_scanandrebuild" line 230)
     invoked from within
 "revupgrade_scanandrebuild broken_port_counts $opts"
     (procedure "macports::revupgrade" line 5)
     invoked from within
 "macports::revupgrade $opts"
     (procedure "action_revupgrade" line 2)
     invoked from within
 "action_revupgrade $action $portlist $opts"
     (procedure "action_upgrade" line 24)
     invoked from within
 "$action_proc $action $portlist [array get global_options]"
     (procedure "process_cmd" line 95)
     invoked from within
 "process_cmd $remaining_args"
     invoked from within
 "if { [llength $remaining_args] > 0 } {

     # If there are remaining arguments, process those as a command
     set exit_status [process_cmd $remaining..."
     (file "/opt/local/bin/port" line 4766)
 }}}
 R works fine, as far as I can tell in light testing.

-- 
Ticket URL: <https://trac.macports.org/ticket/33044>
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