#52255: cannot install octave-optiminterp -----------------------------+-------------------------------- Reporter: MacPorts@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: optiminterp sed | Port: octave-optiminterp -----------------------------+-------------------------------- port install octave-optiminterp fails - details: {{{
port installed | grep octave octave @4.0.3_0+accelerate+app+docs+fltk+gfortran+graphicsmagick+java+qt4gui+sound (active) octave-control @3.0.0_0+gcc5 (active)
sudo port install octave-optiminterp ---> Computing dependencies for octave-optiminterp ---> Configuring octave-optiminterp Error: reinplace: couldn't read file "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/DESCRIPTION": no such file or directory Error: org.macports.configure for port octave-optiminterp returned: reinplace sed(1) failed }}}
Here is the tail of the log file: {{{ ... :notice:configure ---> Configuring octave-optiminterp :debug:configure Using compiler 'Xcode Clang' :debug:configure Executing proc-pre-org.macports.configure-configure-0 :info:configure ---> Patching DESCRIPTION: /Autoload/s@yes@no@g :debug:configure Executing reinplace: /usr/bin/sed /Autoload/s@yes@no@g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/DESCRIPTION >@ file10 2>@stderr :debug:configure couldn't read file "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/DESCRIPTION": no such file or directory while executing "exec /usr/bin/sed /Autoload/s@yes@no@g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_..." ("eval" body line 1) invoked from within "eval exec $cmdline" :error:configure reinplace: couldn't read file "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/DESCRIPTION": no such file or directory :error:configure org.macports.configure for port octave-optiminterp returned: reinplace sed(1) failed :debug:configure Error code: NONE :debug:configure Backtrace: reinplace sed(1) failed while executing "proc-pre-org.macports.configure-configure-0 org.macports.configure" ("eval" body line 1) invoked from within "eval $pre $targetname" :info:configure Warning: targets not executed for octave-optiminterp: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install :notice:configure Please see the log file for port octave-optiminterp for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/main.log }}} The missing file is in fact not there. There is only an empty directory named "install" in the otherwise empty directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/` Finally, I tried uninstall and clean followed by port -v install: {{{
sudo port -v install octave-optiminterp
---> Computing dependencies for octave-optiminterp. ---> Fetching archive for octave-optiminterp ---> octave-optiminterp-0.3.4_0.darwin_15.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified ---> Attempting to fetch octave-optiminterp-0.3.4_0.darwin_15.x86_64.tbz2 from https://packages.macports.org/octave-optiminterp % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0---> Attempting to fetch octave- optiminterp-0.3.4_0.darwin_15.x86_64.tbz2 from http://sea.us.packages.macports.org/macports/packages/octave-optiminterp % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0---> Attempting to fetch octave- optiminterp-0.3.4_0.darwin_15.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/octave- optiminterp % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 308 100 308 0 0 165 0 0:00:01 0:00:01 --:--:-- 165 ---> Fetching distfiles for octave-optiminterp ---> Verifying checksums for octave-optiminterp ---> Checksumming optiminterp-0.3.4.tar.gz ---> Extracting octave-optiminterp ---> Extracting optiminterp-0.3.4.tar.gz ---> Configuring octave-optiminterp ---> Patching DESCRIPTION: /Autoload/s@yes@no@g xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp 2016-09-15 07:56:57.730 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:56:57.731 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:56:57.731 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:56:57.734 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:56:57.909 octave-gui[80696:2529686] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data mkdir (/var/tmp/oct-GJ4Jeb) untar (/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/.tmp/optiminterp.tar.gz, /var/tmp/oct-GJ4Jeb) checking for gcc... /usr/bin/clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /usr/bin/clang accepts -g... yes checking for /usr/bin/clang option to accept ISO C89... none needed checking for mkoctfile... /opt/local/bin/mkoctfile-4.0.3 --verbose /usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-4.0.3/octave/.. -I/opt/local/include/octave-4.0.3/octave -I/opt/local/include -D_THREAD_SAFE -pthread -pipe -Os -arch x86_64 -stdlib=libc++ conftest.cc -o conftest.o /usr/bin/clang++ -I/opt/local/include/octave-4.0.3/octave/.. -I/opt/local/include/octave-4.0.3/octave -I/opt/local/include -D_THREAD_SAFE -pthread -pipe -Os -arch x86_64 -stdlib=libc++ -bundle -bundle_loader /opt/local/bin/octave-4.0.3 -o conftest.oct conftest.o -L/opt/local/lib/octave/4.0.3 -L/opt/local/lib -loctinterp -loctave -L/opt/local/lib -Wl,-headerpad_max_install_names -framework JavaVM clang: warning: argument unused during compilation: '-pthread' retrieving compile and link flags from /opt/local/bin/mkoctfile-4.0.3 --verbose checking for F77_FUNC... /usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-4.0.3/octave/.. -I/opt/local/include/octave-4.0.3/octave -I/opt/local/include -D_THREAD_SAFE -pthread -pipe -Os -arch x86_64 -stdlib=libc++ conftest.cc -o conftest.o yes checking for octave... /opt/local/bin/octave-4.0.3 checking for OCTAVE_VERSION in Octave... 2016-09-15 07:57:02.074 octave- gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.075 octave-gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.075 octave-gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.076 octave-gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.096 octave-gui[80913:2530106] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.161 octave-gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.161 octave-gui[80913:2530092] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 4.0.3 checking for octave_config_info('canonical_host_type') in Octave... 2016-09-15 07:57:02.972 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.973 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.973 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.973 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:02.995 octave-gui[80916:2530129] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.056 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.056 octave-gui[80916:2530117] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data x86_64-apple-darwin15.5.0 checking for octave_config_info('SHLEXT') in Octave... 2016-09-15 07:57:03.860 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.861 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.861 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.861 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.886 octave-gui[80919:2530150] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.945 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:03.945 octave-gui[80919:2530134] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data dylib checking whether ln -s works... yes checking for ranlib... /usr/bin/ranlib checking for strip... strip checking for mkoctfile... mkoctfile checking whether we are using the GNU Fortran compiler... yes checking whether mkoctfile accepts -g... yes checking for Fortran flag to compile .F90 files... none checking whether mkoctfile accepts Fortran 90... yes configure: creating ./config.status config.status: creating Makeconf "$prefix" is /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp/install/optiminterp-0.3.4 "$exec_prefix" is ${prefix} octave commands will install into the following directories: m-files: /opt/local/share/octave/4.0.3/site/m/octave-forge oct-files: /opt/local/lib/octave/4.0.3/site/oct/x86_64-apple- darwin15.5.0/octave-forge binaries: /opt/local/libexec/octave/4.0.3/site/exec/x86_64-apple- darwin15.5.0 alternatives: m-files: /opt/local/share/octave/4.0.3/site/octave-forge- alternatives/m oct-files: /opt/local/lib/octave/4.0.3/site/octave-forge- alternatives/oct/x86_64-apple-darwin15.5.0 shell commands will install into the following directories: binaries: ${exec_prefix}/bin man pages: ${datarootdir}/man libraries: ${exec_prefix}/lib headers: ${prefix}/include octave-forge is configured with octave: /opt/local/bin/octave-4.0.3 (version 4.0.3) mkoctfile: /opt/local/bin/mkoctfile-4.0.3 --verbose for Octave 3 optiminterp toolbox: yes find . -name NOINSTALL -print # shows which toolboxes won't be installed /opt/local/bin/mkoctfile-4.0.3 --verbose -DHAVE_OCTAVE_ -v -c optiminterp.cc FFLAGS="-Os" /opt/local/bin/mkoctfile-4.0.3 --verbose -DHAVE_OCTAVE_ -v -c optimal_interpolation.F90 FFLAGS="-Os" /opt/local/bin/mkoctfile-4.0.3 --verbose -DHAVE_OCTAVE_ -v -c optiminterp_wrapper.F90 /usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-4.0.3/octave/.. -I/opt/local/include/octave-4.0.3/octave -I/opt/local/include -D_THREAD_SAFE -pthread -pipe -Os -arch x86_64 -stdlib=libc++ -DHAVE_OCTAVE_ optiminterp.cc -o optiminterp.o /opt/local/bin/gfortran-mp-5 -c -fPIC -Os -DHAVE_OCTAVE_ optiminterp_wrapper.F90 -o optiminterp_wrapper.o /opt/local/bin/gfortran-mp-5 -c -fPIC -Os -DHAVE_OCTAVE_ optimal_interpolation.F90 -o optimal_interpolation.o optiminterp_wrapper.F90:20:5: use optimal_interpolation 1 Fatal Error: Can't open module file 'optimal_interpolation.mod' for reading at (1): No such file or directory compilation terminated. make: *** [optiminterp_wrapper.o] Error 1 make: *** Waiting for unfinished jobs.... pkg: error running `make' for the optiminterp package. error: called from 'configure_make' in file /opt/local/share/octave/4.0.3/m/pkg/private/configure_make.m near line 96, column 9 2016-09-15 07:57:07.186 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data 2016-09-15 07:57:07.186 octave-gui[80696:2529640] CFPasteboardRef CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create global data Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp" && /opt/local/bin/octave -q -f --eval 'pkg build -verbose -nodeps /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/optiminterp /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/work/.tmp/optiminterp.tar.gz' Exit code: 1 Error: org.macports.configure for port octave-optiminterp returned: configure failure: command execution failed Warning: targets not executed for octave-optiminterp: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install Please see the log file for port octave-optiminterp for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_math_octave-optiminterp/octave- optiminterp/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port octave-optiminterp failed }}} -- Ticket URL: <https://trac.macports.org/ticket/52255> MacPorts <https://www.macports.org/> Ports system for macOS