#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Changes (by jmr@…): * owner: macports-tickets@… => mcalhoun@… * keywords: py26-numpy => * port: => py26-numpy Old description:

After hours of chugging through upgrading all my ports (it's been a while), py26-numpy fails as per the enclosed file.

I ran the py26 activation with:

sudo port install python_select sudo python_select python26

to make sure the right python was selected, but there seems to be a cascade of mis-targeting along the way and attempts to port uninstall keeps leading back through a seemingly infinite number of references to dependencies that have to be uninstalled first:

(~)# port uninstall py26-numpy ---> Unable to uninstall py26-numpy 1.4.0_0, the following ports depend on it: ---> py26-cairo ---> py26-matplotlib Error: port uninstall failed: Please uninstall the ports that depend on py26-numpy first. (~)# sudo port uninstall py26-numpy ---> Unable to uninstall py26-numpy 1.4.0_0, the following ports depend on it: ---> py26-cairo ---> py26-matplotlib Error: port uninstall failed: Please uninstall the ports that depend on py26-numpy first. (~)# sudo port uninstall py26-cairo py26-matplotlib py26-numpy ---> Unable to uninstall py26-cairo 1.8.8_0, the following ports depend on it: ---> py26-gtk Error: port uninstall failed: Please uninstall the ports that depend on py26-cairo first. (~)# sudo port uninstall py26-gtk py26-cairo py26-matplotlib py26-numpy ---> Unable to uninstall py26-gtk 2.16.0_0, the following ports depend on it: ---> py26-pygtksourceview Error: port uninstall failed: Please uninstall the ports that depend on py26-gtk first.

and so on...

If the python_select dance had to be done before the other builds, the process should have either done it, or stopped to allow it before continuing or maybe py26-numpy just should have been rebuilt first.

This is my first attempt to install a new, larger package (gimp) and so far, I'm just going in circles trying to upgrade all of the out of date ports, which won't upgrade so I can't install gimp and so on.

New description: After hours of chugging through upgrading all my ports (it's been a while), py26-numpy fails as per the enclosed file. I ran the py26 activation with: sudo port install python_select sudo python_select python26 to make sure the right python was selected, but there seems to be a cascade of mis-targeting along the way and attempts to port uninstall keeps leading back through a seemingly infinite number of references to dependencies that have to be uninstalled first: {{{ (~)# port uninstall py26-numpy ---> Unable to uninstall py26-numpy 1.4.0_0, the following ports depend on it: ---> py26-cairo ---> py26-matplotlib Error: port uninstall failed: Please uninstall the ports that depend on py26-numpy first. (~)# sudo port uninstall py26-numpy ---> Unable to uninstall py26-numpy 1.4.0_0, the following ports depend on it: ---> py26-cairo ---> py26-matplotlib Error: port uninstall failed: Please uninstall the ports that depend on py26-numpy first. (~)# sudo port uninstall py26-cairo py26-matplotlib py26-numpy ---> Unable to uninstall py26-cairo 1.8.8_0, the following ports depend on it: ---> py26-gtk Error: port uninstall failed: Please uninstall the ports that depend on py26-cairo first. (~)# sudo port uninstall py26-gtk py26-cairo py26-matplotlib py26-numpy ---> Unable to uninstall py26-gtk 2.16.0_0, the following ports depend on it: ---> py26-pygtksourceview Error: port uninstall failed: Please uninstall the ports that depend on py26-gtk first. }}} and so on... If the python_select dance had to be done before the other builds, the process should have either done it, or stopped to allow it before continuing or maybe py26-numpy just should have been rebuilt first. This is my first attempt to install a new, larger package (gimp) and so far, I'm just going in circles trying to upgrade all of the out of date ports, which won't upgrade so I can't install gimp and so on. -- Comment: Please remember to preview and use WikiFormatting, put the name of the port in the Port field, and cc the maintainer. -- Ticket URL: <http://trac.macports.org/ticket/25409#comment:1> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Changes (by snc@…): * cc: snc@… (added) Comment: Preview button :-) Anyways, what's the result of `uname -a` on your machine? -- Ticket URL: <http://trac.macports.org/ticket/25409#comment:3> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Comment(by snc@…): That's strange; I swear I saw x86_64 somewhere in your build log. Hmm. Do you have MacPorts set to install i386 or x86_64? Check out `/opt/local/etc/macports/macports.conf` for `build_arch` -- Ticket URL: <http://trac.macports.org/ticket/25409#comment:5> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Comment(by snc@…): Only one value should be supplied to build_arch: ''build_arch'' The machine architecture to try to build for in normal use Regular architectures include: ppc, i386, ppc64, x86_64 '''Default (10.6):''' x86_64 or i386 depending on hardware '''Default (10.5 and earlier):''' i386 or ppc depending on hardware -- Ticket URL: <http://trac.macports.org/ticket/25409#comment:8> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Comment(by snc@…): Replying to [comment:9 hmgaudecker@…]:

Using only i386 is not really an option (should it be?). It should be an option. Is there an easy way to find out whether numpy is installed in 64 or 32 bit mode? Run the `file` command on something it built (e.g., `file /opt/local/bin/my_program`)

-- Ticket URL: <http://trac.macports.org/ticket/25409#comment:10> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Comment(by hmgaudecker@…): Thanks! On the Intel Core 2 Duo everything got installed nicely in 64-bit mode, it seems: {{{ py26-numpy @1.4.1_1+gcc44 (active) platform='darwin 10' archs='x86_64' }}} On the MacPro I now tried: * installing py26-numpy in 64-bit mode on top of the dependencies being universal -> same error as the first two. * installing py26-numpy in 32-bit mode on top of the dependencies being universal (SuiteSparse doesn't have a universal variant, so uninstalled it and reinstalled in 32-bit mode) -> fails for the opposite problem, essentially (I can attach the log file if desired). * nuking /opt/, installing everything in 32-bit mode from scratch -> gcc44 fails because it doesn't find the right version of mpfr.h, although it seemingly got installed correctly before I'm lost. Back to Python 2.5 ? -- Ticket URL: <http://trac.macports.org/ticket/25409#comment:12> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ---------------------------------+------------------------------------------ Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Keywords: | Port: py26-numpy ---------------------------------+------------------------------------------ Comment(by michaelld@…): There are multiple issues going on in the way numpy determines which compilers to use. You have /usr/bin/gfortran installed, which is non- standard by any OSX install. You might consider removing it, though there also might be a good reason why it is there (it wasn't installed by MacPorts). There's a potential fix for this issue on ticket #24942; please try the last diff & see if it works for you on this issue. The current version of this diff has issues with f2py, but those will be worked out soon -- so, while it's not finished it will hopefully take care of this ticket's issue. -- Ticket URL: <https://trac.macports.org/ticket/25409#comment:16> MacPorts <http://www.macports.org/> Ports system for Mac OS

#25409: py26-numpy fails during 'port upgrade' ----------------------------------+----------------------------------------- Reporter: ssteinerX@… | Owner: mcalhoun@… Type: defect | Status: closed Priority: Normal | Milestone: Component: ports | Version: 1.9.1 Resolution: fixed | Keywords: Port: py26-numpy | ----------------------------------+----------------------------------------- Comment(by ssteinerX@…): Didn't work when I tried port upgrade outdated. Did work when I just followed the steps above to install just py26-numpy, it worked fine. Then port upgrade outdated worked after py26-numpy was all set even (finally) installing gimp which was where I think this all started... Thanks! S -- Ticket URL: <https://trac.macports.org/ticket/25409#comment:18> MacPorts <http://www.macports.org/> Ports system for Mac OS