[MacPorts] #39141: py26-scipy 0.12.0_2 command execution failed
#39141: py26-scipy 0.12.0_2 command execution failed ------------------------------+-------------------------------- Reporter: alain.billoire@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: py26-scipy ------------------------------+-------------------------------- Update from 0.11.0_0 to 0.12.0_2 on OSX Mac OS X 10.6.8 (10K549) fails with message Error: org.macports.build for port py26-scipy returned: command execution failed -- Ticket URL: <https://trac.macports.org/ticket/39141> MacPorts <http://www.macports.org/> Ports system for OS X
#39141: py26-scipy 0.12.0_2 command execution failed -------------------------------+-------------------- Reporter: alain.billoire@… | Owner: sean@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Resolution: | Keywords: Port: py26-scipy | -------------------------------+-------------------- Changes (by ryandesign@…): * owner: macports-tickets@… => sean@… Comment: Could you please [http://guide.macports.org/chunked/project.html#project.tickets.prerequisites clean and try again]? This was not a clean build. -- Ticket URL: <https://trac.macports.org/ticket/39141#comment:1> MacPorts <http://www.macports.org/> Ports system for OS X
#39141: py26-scipy 0.12.0_2 command execution failed -------------------------------+-------------------- Reporter: alain.billoire@… | Owner: sean@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Resolution: | Keywords: Port: py26-scipy | -------------------------------+-------------------- Comment (by alain.billoire@…): Replying to [comment:1 ryandesign@…]:
Could you please [http://guide.macports.org/chunked/project.html#project.tickets.prerequisites clean and try again]? This was not a clean build.
I typed sudo port clean --all installed sudo port -f uninstall inactive and then sudo port upgrade --enforce-variants installed and got the same error message Error: org.macports.build for port py26-scipy returned: command execution failed -- Ticket URL: <https://trac.macports.org/ticket/39141#comment:2> MacPorts <http://www.macports.org/> Ports system for OS X
#39141: py26-scipy 0.12.0_2 command execution failed -------------------------------+-------------------- Reporter: alain.billoire@… | Owner: sean@… Type: defect | Status: closed Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Resolution: duplicate | Keywords: Port: py-numpy | -------------------------------+-------------------- Changes (by macsforever2000@…): * status: new => closed * resolution: => duplicate * port: py26-scipy => py-numpy Comment: The error is actually in your numpy port. This is a duplicate of #37415. {{{ :info:build Traceback (most recent call last): :info:build File "setup.py", line 165, in <module> :info:build setup_package() :info:build File "setup.py", line 145, in setup_package :info:build from numpy.distutils.core import setup :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/__init__.py", line 137, in <module> :info:build import add_newdocs :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/add_newdocs.py", line 9, in <module> :info:build from numpy.lib import add_newdoc :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/lib/__init__.py", line 13, in <module> :info:build from polynomial import * :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/lib/polynomial.py", line 17, in <module> :info:build from numpy.linalg import eigvals, lstsq, inv :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/linalg/__init__.py", line 48, in <module> :info:build from linalg import * :info:build File "/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/linalg/linalg.py", line 23, in <module> :info:build from numpy.linalg import lapack_lite :info:build ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/linalg/lapack_lite.so, 2): Symbol not found: _omp_get_num_threads :info:build Referenced from: /opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/linalg/lapack_lite.so :info:build Expected in: flat namespace :info:build in /opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6 /site-packages/numpy/linalg/lapack_lite.so :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_ports_python_py-scipy/py26-scipy/work/scipy-0.12.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-4.4 --f90exec /opt/local/bin/gfortran-mp-4.4 config --cc /opt/local/bin/gcc-mp-4.4 --include-dirs /opt/local/include --library-dirs /opt/local/lib build -- Ticket URL: <https://trac.macports.org/ticket/39141#comment:3> MacPorts <http://www.macports.org/> Ports system for OS X
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