[MacPorts] #42100: arpack 3.1.3 installation fails "Processing of port arpack failed"
#42100: arpack 3.1.3 installation fails "Processing of port arpack failed" ------------------------+-------------------------------- Reporter: nowornot@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: arpack | Port: arpack ------------------------+-------------------------------- I've tried for the last two days to update octave, and the main problem has been with arpack. I've search through previous tickets and tried many of the suggestions, but none of them work. Basic error are as follows: mac83913:~ mp2$ sudo port clean arpack ---> Cleaning arpack mac83913:~ mp2$ sudo port install arpack ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Applying patches to arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed I've tried the +atlas option and also the -accelerate option. Here's the +atlas option: mac83913:~ mp2$ sudo port install arpack +atlas ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed I've updated to the lastest version of clang as recently suggested in another ticket. mac83913:~ mp2$ clang -v Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn) Target: x86_64-apple-darwin12.5.0 Thread model: posix mac83913:~ mp2$ port version is 2.2.1 mac83913:~ mp2$ port version Version: 2.2.1 mac83913:~ mp2$ I've also selfupdated port, and updated all packages, or uninstalled any problem packages. Any ideas on how to proceed from here? Any ideas are appreciated! -- Ticket URL: <https://trac.macports.org/ticket/42100> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Changes (by larryv@…): * owner: macports-tickets@… => mmoll@… * keywords: arpack => Old description:
I've tried for the last two days to update octave, and the main problem has been with arpack. I've search through previous tickets and tried many of the suggestions, but none of them work. Basic error are as follows:
mac83913:~ mp2$ sudo port clean arpack ---> Cleaning arpack mac83913:~ mp2$ sudo port install arpack ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Applying patches to arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed
I've tried the +atlas option and also the -accelerate option. Here's the +atlas option:
mac83913:~ mp2$ sudo port install arpack +atlas ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed
I've updated to the lastest version of clang as recently suggested in another ticket.
mac83913:~ mp2$ clang -v Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn) Target: x86_64-apple-darwin12.5.0 Thread model: posix mac83913:~ mp2$
port version is 2.2.1
mac83913:~ mp2$ port version Version: 2.2.1 mac83913:~ mp2$
I've also selfupdated port, and updated all packages, or uninstalled any problem packages.
Any ideas on how to proceed from here? Any ideas are appreciated!
New description: I've tried for the last two days to update octave, and the main problem has been with arpack. I've search through previous tickets and tried many of the suggestions, but none of them work. Basic error are as follows: {{{ mac83913:~ mp2$ sudo port clean arpack ---> Cleaning arpack mac83913:~ mp2$ sudo port install arpack ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+accelerate+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Applying patches to arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed }}} I've tried the +atlas option and also the -accelerate option. Here's the +atlas option: {{{ mac83913:~ mp2$ sudo port install arpack +atlas ---> Computing dependencies for arpack ---> Fetching archive for arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://lil.fr.packages.macports.org/arpack ---> Attempting to fetch arpack-3.1.3_0+atlas+gcc48+universal.darwin_12.i386-x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/arpack ---> Fetching distfiles for arpack ---> Verifying checksums for arpack ---> Extracting arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed }}} I've updated to the lastest version of clang as recently suggested in another ticket. {{{ mac83913:~ mp2$ clang -v Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn) Target: x86_64-apple-darwin12.5.0 Thread model: posix mac83913:~ mp2$ }}} port version is 2.2.1 {{{ mac83913:~ mp2$ port version Version: 2.2.1 mac83913:~ mp2$ }}} I've also selfupdated port, and updated all packages, or uninstalled any problem packages. Any ideas on how to proceed from here? Any ideas are appreciated! -- Comment: Thanks for the ticket. In the future, please Cc relevant port maintainers (e.g., `port info --maintainers arpack`). -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:1> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): Thank you for the quick response! It appears that I do have the BLAS libraries installed: {{{ mac83913:~ mp2$ ls /usr/lib | grep blas libblas.dylib libcblas.dylib mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:2> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): Are you sure you gcc 4.8 suite was installed with the +multilib option? It seems you have no fortran compiler available for the i386 arch. -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:3> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): Just to check that gcc48 has the multilib option, I reinstalled it with that option, and tried again to install arpack, and again it failed: {{{ mac83913:~ mp2$ sudo port install gcc48 +multilib ---> Computing dependencies for gcc48 ---> Cleaning gcc48 ---> Scanning binaries for linking errors: 100.0% ---> No broken files found. mac83913:~ mp2$ sudo port install arpack +atlas ---> Computing dependencies for arpack ---> Configuring arpack Error: Failed to configure arpack, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/config.log Error: org.macports.configure for port arpack returned: configure failure: command execution failed Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port arpack failed mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:4> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): Oops! My bad! (© Derpy) It should be the +universal option (there is no +multilib option). gcc48 must be installed universal if you want to compile universal port with it. -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:5> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): I think it was installed with the +universal option, based on this output: {{{ mac83913:~ mp2$ port installed | grep gcc gcc48 @4.8.2_0+universal (active) gcc_select @0.1_7 gcc_select @0.1_8 (active) gccmakedep @1.0.2_3 (active) libgcc @4.8.2_0+universal (active) mac83913:~ mp2$ }}} Please correct me if I am wrong. -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:6> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): IT should. What gives you the output of: {{{ ls -l /opt/local/lib/gcc48/i386 }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:7> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): Here you go! {{{ mac83913:~ mp2$ ls -l /opt/local/lib/gcc48/i386 total 153728 drwxr-xr-x 7 root admin 238 Jan 11 10:01 gcj-4.8.2-14 lrwxr-xr-x 1 root admin 37 Jan 11 10:00 libasan.0.dylib -> /opt/local/lib/libgcc/libasan.0.dylib lrwxr-xr-x 1 root admin 15 Jan 11 09:59 libasan.dylib -> libasan.0.dylib -rwxr-xr-x 1 root admin 931 Jan 11 10:00 libasan.la -rw-r--r-- 1 root admin 3644 Jan 11 09:59 libasan_preinit.o lrwxr-xr-x 1 root admin 39 Jan 11 10:00 libatomic.1.dylib -> /opt/local/lib/libgcc/libatomic.1.dylib -rw-r--r-- 1 root admin 192896 Jan 11 10:00 libatomic.a lrwxr-xr-x 1 root admin 17 Jan 11 10:00 libatomic.dylib -> libatomic.1.dylib -rwxr-xr-x 1 root admin 961 Jan 11 10:00 libatomic.la -rwxr-xr-x 1 root admin 6240904 Jan 11 10:00 libgcj-tools.14.dylib lrwxr-xr-x 1 root admin 21 Jan 11 10:00 libgcj-tools.dylib -> libgcj-tools.14.dylib -rwxr-xr-x 1 root admin 959 Jan 11 10:00 libgcj-tools.la -rwxr-xr-x 1 root admin 56848284 Jan 11 10:00 libgcj.14.dylib lrwxr-xr-x 1 root admin 15 Jan 11 10:00 libgcj.dylib -> libgcj.14.dylib -rwxr-xr-x 1 root admin 929 Jan 11 10:00 libgcj.la lrwxr-xr-x 1 root admin 41 Jan 11 10:00 libgfortran.3.dylib -> /opt/local/lib/libgcc/libgfortran.3.dylib -rw-r--r-- 1 root admin 5742456 Jan 11 09:59 libgfortran.a lrwxr-xr-x 1 root admin 19 Jan 11 09:59 libgfortran.dylib -> libgfortran.3.dylib -rwxr-xr-x 1 root admin 964 Jan 11 10:00 libgfortran.la -rw-r--r-- 1 root admin 198 Jan 11 09:59 libgfortran.spec -rwxr-xr-x 1 root admin 14220 Jan 11 10:00 libgij.14.dylib lrwxr-xr-x 1 root admin 15 Jan 11 10:00 libgij.dylib -> libgij.14.dylib -rwxr-xr-x 1 root admin 929 Jan 11 10:00 libgij.la lrwxr-xr-x 1 root admin 37 Jan 11 10:00 libgomp.1.dylib -> /opt/local/lib/libgcc/libgomp.1.dylib -rw-r--r-- 1 root admin 382832 Jan 11 10:00 libgomp.a lrwxr-xr-x 1 root admin 15 Jan 11 10:00 libgomp.dylib -> libgomp.1.dylib -rwxr-xr-x 1 root admin 940 Jan 11 10:00 libgomp.la -rw-r--r-- 1 root admin 165 Jan 11 10:00 libgomp.spec lrwxr-xr-x 1 root admin 36 Jan 11 10:00 libitm.1.dylib -> /opt/local/lib/libgcc/libitm.1.dylib -rw-r--r-- 1 root admin 1255600 Jan 11 10:00 libitm.a lrwxr-xr-x 1 root admin 14 Jan 11 10:00 libitm.dylib -> libitm.1.dylib -rwxr-xr-x 1 root admin 934 Jan 11 10:00 libitm.la -rw-r--r-- 1 root admin 162 Jan 11 10:00 libitm.spec lrwxr-xr-x 1 root admin 41 Jan 11 10:00 libobjc-gnu.4.dylib -> /opt/local/lib/libgcc/libobjc-gnu.4.dylib -rw-r--r-- 1 root admin 394264 Jan 11 09:59 libobjc-gnu.a lrwxr-xr-x 1 root admin 19 Jan 11 09:59 libobjc-gnu.dylib -> libobjc-gnu.4.dylib -rwxr-xr-x 1 root admin 964 Jan 11 10:00 libobjc-gnu.la lrwxr-xr-x 1 root admin 41 Jan 11 10:00 libquadmath.0.dylib -> /opt/local/lib/libgcc/libquadmath.0.dylib -rw-r--r-- 1 root admin 957048 Jan 11 09:59 libquadmath.a lrwxr-xr-x 1 root admin 19 Jan 11 09:59 libquadmath.dylib -> libquadmath.0.dylib -rwxr-xr-x 1 root admin 964 Jan 11 10:00 libquadmath.la lrwxr-xr-x 1 root admin 36 Jan 11 10:00 libssp.0.dylib -> /opt/local/lib/libgcc/libssp.0.dylib -rw-r--r-- 1 root admin 57672 Jan 11 09:59 libssp.a lrwxr-xr-x 1 root admin 14 Jan 11 09:59 libssp.dylib -> libssp.0.dylib -rwxr-xr-x 1 root admin 934 Jan 11 10:00 libssp.la -rw-r--r-- 1 root admin 2400 Jan 11 09:59 libssp_nonshared.a -rwxr-xr-x 1 root admin 923 Jan 11 10:00 libssp_nonshared.la lrwxr-xr-x 1 root admin 39 Jan 11 10:00 libstdc++.6.dylib -> /opt/local/lib/libgcc/libstdc++.6.dylib -rw-r--r-- 1 root admin 5880616 Jan 11 09:59 libstdc++.a -rw-r--r-- 1 root admin 2323 Jan 11 09:59 libstdc++.a-gdb.py lrwxr-xr-x 1 root admin 17 Jan 11 09:59 libstdc++.dylib -> libstdc++.6.dylib -rwxr-xr-x 1 root admin 953 Jan 11 10:00 libstdc++.la -rw-r--r-- 1 root admin 547784 Jan 11 09:59 libsupc++.a -rwxr-xr-x 1 root admin 902 Jan 11 10:00 libsupc++.la -rw-r--r-- 1 root admin 1437 Jan 11 10:00 logging.properties drwxr-xr-x 3 root admin 102 Jan 11 10:01 security mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:8> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): And what is the output of {{{ file /opt/local/lib/libgcc/libgfortran.3.dylib }}} ? -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:9> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): {{{ mac83913:~ mp2$ file /opt/local/lib/libgcc/libgfortran.3.dylib /opt/local/lib/libgcc/libgfortran.3.dylib: Mach-O universal binary with 2 architectures /opt/local/lib/libgcc/libgfortran.3.dylib (for architecture x86_64): Mach-O 64-bit dynamically linked shared library x86_64 /opt/local/lib/libgcc/libgfortran.3.dylib (for architecture i386): Mach-O dynamically linked shared library i386 mac83913:~ mp2$ }}} Thanks! -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:10> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): You're welcome! If you try {{{ arch -32 gfortran-mp-4.8 }}} what message do you get? -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:11> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): I think you're zeroing in on it! {{{ mac83913:~ mp2$ arch -32 gfortran-mp-4.8 arch: posix_spawnp: gfortran-mp-4.8: Bad CPU type in executable mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:12> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): Well, on this side everything looks ok. Can you upload this file: {{{ /opt/local/var/macports/build/_Macports_dports_math_arpack/arpack/work /arpack-ng-3.1.3/config.log }}} Thanks! -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:13> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): I found two config.log files in similar directories, and I've uploaded both of them. Here is my directory structure: {{{ ls /opt/local/var/macports/build/ _opt_local_var_macports_sources_www.macports.org_files_ports_lang_gcc45 _opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack _opt_local_var_macports_sources_www.macports.org_files_ports_math_metis _opt_local_var_macports_sources_www.macports.org_files_ports_math_octave _opt_local_var_macports_sources_www.macports.org_files_ports_math_octave- devel _opt_local_var_macports_sources_www.macports.org_files_ports_www_webkit- gtk mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/ arpack mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/ arpack mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/ work mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work/ arpack-ng-3.1.3 arpack-ng-3.1.3-i386 arpack-ng-3.1.3-x86_64 mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-i386/ CHANGES Makefile.in TESTS arpack.pc.in configure.ac m4 COPYING PARPACK TODO config.guess depcomp missing DOCUMENTS PARPACK_CHANGES UTIL config.log detect_arpack_bug.m4 EXAMPLES README VISUAL_STUDIO config.sub install-sh Makefile.am SRC aclocal.m4 configure ltmain.sh mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3- arpack-ng-3.1.3-i386/ arpack-ng-3.1.3-x86_64/ mac83913:~ mp2$ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3-x86_64/ CHANGES Makefile.in TODO config.guess depcomp missing COPYING PARPACK UTIL config.log detect_arpack_bug.m4 DOCUMENTS PARPACK_CHANGES VISUAL_STUDIO config.status install-sh EXAMPLES README aclocal.m4 config.sub libtool Makefile SRC arpack.pc configure ltmain.sh Makefile.am TESTS arpack.pc.in configure.ac m4 mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:14> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): P.S. There was no config.log file in /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3 {{{ ls /opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_arpack/arpack/work /arpack-ng-3.1.3 CHANGES Makefile.in TESTS arpack.pc.in depcomp missing COPYING PARPACK TODO config.guess detect_arpack_bug.m4 DOCUMENTS PARPACK_CHANGES UTIL config.sub install-sh EXAMPLES README VISUAL_STUDIO configure ltmain.sh Makefile.am SRC aclocal.m4 configure.ac m4 mac83913:~ mp2$ }}} -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:15> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): The culprit is here: {{{ configure:15014: /opt/local/bin/gcc-mp-4.8 -o conftest -pipe -Os -m32 -I/opt/local/include conftest.c cfortran_test.o -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.2 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.2/../../.. -lgfortran -lquadmath -lm >&5 ld: warning: ignoring file cfortran_test.o, file was built for unsupported file format ( 0xcf 0xfa 0xed 0xfe 0x 7 0x 0 0x 0 0x 1 0x 3 0x 0 0x 0 0x 0 0x 1 0x 0 0x 0 0x 0 ) which is not the architecture being linked (i386): cfortran_test.o ld: warning: ignoring file /opt/local/lib/gcc48/gcc/x86_64-apple- darwin12/4.8.2/libgcc.a, file was built for archive which is not the architecture being linked (i386): /opt/local/lib/gcc48/gcc/x86_64-apple- darwin12/4.8.2/libgcc.a Undefined symbols for architecture i386: "_foobar", referenced from: _main in cc7dY1NU.o ld: symbol(s) not found for architecture i386 collect2: error: ld returned 1 exit status configure:15014: $? = 1 }}} The 32-bit compiler tries to use the 64-bit library, causing the failure. But why it does, I have no clue (as yet). -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:16> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): Excellent progress! Thank you! I'd be happy to temporarily rename a directory or something like that to make progress on this... -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:17> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by vince@…): I quit for tonight. I'll be back tomorrow maybe with a better clue. Sorry for the trudge. -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:18> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): No problem! I greatly appreciate your help. -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:19> MacPorts <http://www.macports.org/> Ports system for OS X
#42100: arpack 3.1.3_0+accelerate+gcc48+universal: i386 configure cannot find BLAS -------------------------+--------------------- Reporter: nowornot@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: Port: arpack | -------------------------+--------------------- Comment (by nowornot@…): I tried installing the previous two versions of arpack by downloading the appropriate files from here: https://trac.macports.org/log/trunk/dports/math/arpack?rev=110855 but had no luck with various errors. What is the path forward on this? Thanks! -- Ticket URL: <https://trac.macports.org/ticket/42100#comment:20> MacPorts <http://www.macports.org/> Ports system for OS X
participants (1)
-
MacPorts