[MacPorts] #41289: Failure to build arpack @3.1.3 on Maverick w/ Undefined symbols
#41289: Failure to build arpack @3.1.3 on Maverick w/ Undefined symbols ----------------------------+-------------------------------- Reporter: steven.levis@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: ----------------------------+-------------------------------- Here's the log file. Already tried clean --all and upgrade outdated version:1 :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 502 :debug:main Executing org.macports.main (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.archivefetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.configure (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:build build phase started at Sat Nov 9 22:14:49 PST 2013 :notice:build ---> Building arpack :debug:build Executing org.macports.build (arpack) :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Making all in UTIL :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build Making all in SRC :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build Making all in . :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build /bin/sh ./libtool --tag=F77 --mode=link /opt/local/bin /gfortran-mp-4.8 -O2 -m64 -no-undefined -version-info 2:0 /usr/lib/libblas.dylib /usr/lib/liblapack.dylib -o libarpack.la -rpath /opt/local/lib ./SRC/libarpacksrc.la ./UTIL/libarpackutil.la -lblas -llapack :info:build libtool: link: /opt/local/bin/gfortran-mp-4.8 -dynamiclib -o .libs/libarpack.2.dylib -Wl,-force_load,./SRC/.libs/libarpacksrc.a -Wl,-force_load,./UTIL/.libs/libarpackutil.a -lblas -llapack -O2 -m64 -install_name /opt/local/lib/libarpack.2.dylib -compatibility_version 3 -current_version 3.0 -Wl,-single_module :info:build Undefined symbols for architecture x86_64: :info:build "_cgeqr2_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clacpy_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clahqr_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clanhs_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clarnv_", referenced from: :info:build _cgetv0_ in libarpacksrc.a(cgetv0.o) :info:build "_clartg_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clascl_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build "_claset_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrevc_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrsen_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_cunm2r_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_dgeqr2_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlabad_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_dlacpy_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlaev2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlahqr_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlamch_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnaupd_ in libarpacksrc.a(dnaupd.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build ... :info:build "_dlanhs_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlanst_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlanv2_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build "_dlapy2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dsortc_ in libarpacksrc.a(dsortc.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build ... :info:build "_dlarf_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarfg_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarnv_", referenced from: :info:build _dgetv0_ in libarpacksrc.a(dgetv0.o) :info:build "_dlartg_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build "_dlascl_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dsaitr_ in libarpacksrc.a(dsaitr.o) :info:build "_dlaset_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlasr_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dorm2r_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dsteqr_", referenced from: :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dtrevc_", referenced from: :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dtrsen_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_sgeqr2_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slabad_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_slacpy_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slaev2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slahqr_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slamch_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snaupd_ in libarpacksrc.a(snaupd.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build ... :info:build "_slanhs_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slanst_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slanv2_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build "_slapy2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _ssortc_ in libarpacksrc.a(ssortc.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build ... :info:build "_slarf_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarfg_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarnv_", referenced from: :info:build _sgetv0_ in libarpacksrc.a(sgetv0.o) :info:build "_slartg_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build "_slascl_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _ssaitr_ in libarpacksrc.a(ssaitr.o) :info:build "_slaset_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slasr_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_sorm2r_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_ssteqr_", referenced from: :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_strevc_", referenced from: :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_strsen_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_zgeqr2_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlacpy_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlahqr_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlanhs_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlarnv_", referenced from: :info:build _zgetv0_ in libarpacksrc.a(zgetv0.o) :info:build "_zlartg_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlascl_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build "_zlaset_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrevc_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrsen_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zunm2r_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build ld: symbol(s) not found for architecture x86_64 :info:build collect2: error: ld returned 1 exit status :info:build make[1]: *** [libarpack.la] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build Exit code: 2 :error:build org.macports.build for port arpack returned: command execution failed :debug:build Error code: CHILDSTATUS 60940 2 :debug:build Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "$procedure $targetname" :info:build Warning: targets not executed for arpack: org.macports.activate org.macports.build org.macports.destroot org.macports.install :error:build Failed to install arpack :debug:build couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" :notice:build Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/main.log -- Ticket URL: <https://trac.macports.org/ticket/41289> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Changes (by ryandesign@…): * keywords: => mavericks * owner: macports-tickets@… => mmoll@… * port: => arpack Old description:
Here's the log file. Already tried clean --all and upgrade outdated
version:1 :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 502 :debug:main Executing org.macports.main (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.archivefetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.configure (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:build build phase started at Sat Nov 9 22:14:49 PST 2013 :notice:build ---> Building arpack :debug:build Executing org.macports.build (arpack) :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Making all in UTIL :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build Making all in SRC :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build Making all in . :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build /bin/sh ./libtool --tag=F77 --mode=link /opt/local/bin /gfortran-mp-4.8 -O2 -m64 -no-undefined -version-info 2:0 /usr/lib/libblas.dylib /usr/lib/liblapack.dylib -o libarpack.la -rpath /opt/local/lib ./SRC/libarpacksrc.la ./UTIL/libarpackutil.la -lblas -llapack :info:build libtool: link: /opt/local/bin/gfortran-mp-4.8 -dynamiclib -o .libs/libarpack.2.dylib -Wl,-force_load,./SRC/.libs/libarpacksrc.a -Wl,-force_load,./UTIL/.libs/libarpackutil.a -lblas -llapack -O2 -m64 -install_name /opt/local/lib/libarpack.2.dylib -compatibility_version 3 -current_version 3.0 -Wl,-single_module :info:build Undefined symbols for architecture x86_64: :info:build "_cgeqr2_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clacpy_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clahqr_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clanhs_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clarnv_", referenced from: :info:build _cgetv0_ in libarpacksrc.a(cgetv0.o) :info:build "_clartg_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clascl_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build "_claset_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrevc_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrsen_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_cunm2r_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_dgeqr2_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlabad_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_dlacpy_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlaev2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlahqr_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlamch_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnaupd_ in libarpacksrc.a(dnaupd.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build ... :info:build "_dlanhs_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlanst_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlanv2_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build "_dlapy2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dsortc_ in libarpacksrc.a(dsortc.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build ... :info:build "_dlarf_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarfg_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarnv_", referenced from: :info:build _dgetv0_ in libarpacksrc.a(dgetv0.o) :info:build "_dlartg_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build "_dlascl_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dsaitr_ in libarpacksrc.a(dsaitr.o) :info:build "_dlaset_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlasr_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dorm2r_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dsteqr_", referenced from: :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dtrevc_", referenced from: :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dtrsen_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_sgeqr2_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slabad_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_slacpy_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slaev2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slahqr_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slamch_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snaupd_ in libarpacksrc.a(snaupd.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build ... :info:build "_slanhs_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slanst_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slanv2_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build "_slapy2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _ssortc_ in libarpacksrc.a(ssortc.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build ... :info:build "_slarf_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarfg_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarnv_", referenced from: :info:build _sgetv0_ in libarpacksrc.a(sgetv0.o) :info:build "_slartg_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build "_slascl_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _ssaitr_ in libarpacksrc.a(ssaitr.o) :info:build "_slaset_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slasr_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_sorm2r_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_ssteqr_", referenced from: :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_strevc_", referenced from: :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_strsen_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_zgeqr2_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlacpy_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlahqr_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlanhs_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlarnv_", referenced from: :info:build _zgetv0_ in libarpacksrc.a(zgetv0.o) :info:build "_zlartg_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlascl_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build "_zlaset_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrevc_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrsen_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zunm2r_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build ld: symbol(s) not found for architecture x86_64 :info:build collect2: error: ld returned 1 exit status :info:build make[1]: *** [libarpack.la] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build Exit code: 2 :error:build org.macports.build for port arpack returned: command execution failed :debug:build Error code: CHILDSTATUS 60940 2 :debug:build Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "$procedure $targetname" :info:build Warning: targets not executed for arpack: org.macports.activate org.macports.build org.macports.destroot org.macports.install :error:build Failed to install arpack :debug:build couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" :notice:build Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/main.log
New description: Here's the log file. Already tried clean --all and upgrade outdated {{{ version:1 :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 502 :debug:main Executing org.macports.main (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.archivefetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.configure (arpack) :debug:main Privilege de-escalation not attempted as not running as root. :debug:build build phase started at Sat Nov 9 22:14:49 PST 2013 :notice:build ---> Building arpack :debug:build Executing org.macports.build (arpack) :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Making all in UTIL :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/UTIL' :info:build Making all in SRC :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build make[1]: Nothing to be done for `all'. :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3/SRC' :info:build Making all in . :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build /bin/sh ./libtool --tag=F77 --mode=link /opt/local/bin /gfortran-mp-4.8 -O2 -m64 -no-undefined -version-info 2:0 /usr/lib/libblas.dylib /usr/lib/liblapack.dylib -o libarpack.la -rpath /opt/local/lib ./SRC/libarpacksrc.la ./UTIL/libarpackutil.la -lblas -llapack :info:build libtool: link: /opt/local/bin/gfortran-mp-4.8 -dynamiclib -o .libs/libarpack.2.dylib -Wl,-force_load,./SRC/.libs/libarpacksrc.a -Wl,-force_load,./UTIL/.libs/libarpackutil.a -lblas -llapack -O2 -m64 -install_name /opt/local/lib/libarpack.2.dylib -compatibility_version 3 -current_version 3.0 -Wl,-single_module :info:build Undefined symbols for architecture x86_64: :info:build "_cgeqr2_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clacpy_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clahqr_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_clanhs_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clarnv_", referenced from: :info:build _cgetv0_ in libarpacksrc.a(cgetv0.o) :info:build "_clartg_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_clascl_", referenced from: :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build "_claset_", referenced from: :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrevc_", referenced from: :info:build _cneigh_ in libarpacksrc.a(cneigh.o) :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_ctrsen_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_cunm2r_", referenced from: :info:build _cneupd_ in libarpacksrc.a(cneupd.o) :info:build "_dgeqr2_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlabad_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_dlacpy_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dlaev2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlahqr_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlamch_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnaupd_ in libarpacksrc.a(dnaupd.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build ... :info:build "_dlanhs_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlanst_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dlanv2_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build "_dlapy2_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dsortc_ in libarpacksrc.a(dsortc.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dnaup2_ in libarpacksrc.a(dnaup2.o) :info:build _dnconv_ in libarpacksrc.a(dnconv.o) :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build ... :info:build "_dlarf_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarfg_", referenced from: :info:build _dlaqrb_ in libarpacksrc.a(dlaqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build "_dlarnv_", referenced from: :info:build _dgetv0_ in libarpacksrc.a(dgetv0.o) :info:build "_dlartg_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build "_dlascl_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build _dnaitr_ in libarpacksrc.a(dnaitr.o) :info:build _dsaitr_ in libarpacksrc.a(dsaitr.o) :info:build "_dlaset_", referenced from: :info:build _dnapps_ in libarpacksrc.a(dnapps.o) :info:build _dsapps_ in libarpacksrc.a(dsapps.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dlasr_", referenced from: :info:build _dstqrb_ in libarpacksrc.a(dstqrb.o) :info:build "_dorm2r_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dsteqr_", referenced from: :info:build _dseupd_ in libarpacksrc.a(dseupd.o) :info:build "_dtrevc_", referenced from: :info:build _dneigh_ in libarpacksrc.a(dneigh.o) :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_dtrsen_", referenced from: :info:build _dneupd_ in libarpacksrc.a(dneupd.o) :info:build "_sgeqr2_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slabad_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _cnaitr_ in libarpacksrc.a(cnaitr.o) :info:build _cnapps_ in libarpacksrc.a(cnapps.o) :info:build "_slacpy_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_slaev2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slahqr_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slamch_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snaupd_ in libarpacksrc.a(snaupd.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build ... :info:build "_slanhs_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slanst_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_slanv2_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build "_slapy2_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _ssortc_ in libarpacksrc.a(ssortc.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _snaup2_ in libarpacksrc.a(snaup2.o) :info:build _snconv_ in libarpacksrc.a(snconv.o) :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build ... :info:build "_slarf_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarfg_", referenced from: :info:build _slaqrb_ in libarpacksrc.a(slaqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build "_slarnv_", referenced from: :info:build _sgetv0_ in libarpacksrc.a(sgetv0.o) :info:build "_slartg_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build "_slascl_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build _snaitr_ in libarpacksrc.a(snaitr.o) :info:build _ssaitr_ in libarpacksrc.a(ssaitr.o) :info:build "_slaset_", referenced from: :info:build _snapps_ in libarpacksrc.a(snapps.o) :info:build _ssapps_ in libarpacksrc.a(ssapps.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_slasr_", referenced from: :info:build _sstqrb_ in libarpacksrc.a(sstqrb.o) :info:build "_sorm2r_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_ssteqr_", referenced from: :info:build _sseupd_ in libarpacksrc.a(sseupd.o) :info:build "_strevc_", referenced from: :info:build _sneigh_ in libarpacksrc.a(sneigh.o) :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_strsen_", referenced from: :info:build _sneupd_ in libarpacksrc.a(sneupd.o) :info:build "_zgeqr2_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlacpy_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlahqr_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zlanhs_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlarnv_", referenced from: :info:build _zgetv0_ in libarpacksrc.a(zgetv0.o) :info:build "_zlartg_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build "_zlascl_", referenced from: :info:build _znaitr_ in libarpacksrc.a(znaitr.o) :info:build "_zlaset_", referenced from: :info:build _znapps_ in libarpacksrc.a(znapps.o) :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrevc_", referenced from: :info:build _zneigh_ in libarpacksrc.a(zneigh.o) :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_ztrsen_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build "_zunm2r_", referenced from: :info:build _zneupd_ in libarpacksrc.a(zneupd.o) :info:build ld: symbol(s) not found for architecture x86_64 :info:build collect2: error: ld returned 1 exit status :info:build make[1]: *** [libarpack.la] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3' :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/work /arpack-ng-3.1.3" && /usr/bin/make -j8 -w all :info:build Exit code: 2 :error:build org.macports.build for port arpack returned: command execution failed :debug:build Error code: CHILDSTATUS 60940 2 :debug:build Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "$procedure $targetname" :info:build Warning: targets not executed for arpack: org.macports.activate org.macports.build org.macports.destroot org.macports.install :error:build Failed to install arpack :debug:build couldn't open "/System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/tclIndex": no such file or directory while executing "open [file join $dir tclIndex]" :notice:build Please see the log file for port arpack for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_arpack/arpack/main.log }}} -- Comment: The log is incomplete. Please [http://guide.macports.org/chunked/project.html#project.tickets.prerequisites clean and try again], then attach (not paste) the new log to this ticket. -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:1> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by ryandesign@…): Oh sorry, I now see you did attach a complete log, in addition to the incomplete pasted one. -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:2> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by mmoll@…): This doesn't seem to happen for me on Mavericks. I noticed that on my machine, configure used "/opt/local/bin/gsed", while on yours it used "/usr/bin/sed". This seems like a minor thing, but could you try the following: {{{ sudo port clean arpack sudo port uninstall arpack sudo port install gsed arpack }}} -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:3> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by steven.levis@…): Still the same missing symbols after installing gsed. I confirmed that configure is using gsed. I'm starting to suspect gfortran since there is no macport for it. I am using gfortran-4.9 -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:4> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by steven.levis@…): Replying to [comment:4 steven.levis@…]:
Still the same missing symbols after installing gsed. I confirmed that configure is using gsed. I'm starting to suspect gfortran since there is no macport for it. I am using gfortran-4.9
nvm about that gfortran-4.9 comment. I see that gcc48 installs gfortran- mp-4.8, which is apparently what is being used in building arpack -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:5> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by mmoll@…): I am also using gcc48. I don't understand what is different between your setup and mine. -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:6> MacPorts <http://www.macports.org/> Ports system for OS X
#41289: arpack @3.1.3: Undefined symbols -----------------------------+----------------------- Reporter: steven.levis@… | Owner: mmoll@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Resolution: | Keywords: mavericks Port: arpack | -----------------------------+----------------------- Comment (by steven.levis@…): How can I replay, step-through, and debug the port build on my machine? Any pointers, links, etc., would be appreciated. I have experience building / configuring software on linux platforms. -- Ticket URL: <https://trac.macports.org/ticket/41289#comment:7> MacPorts <http://www.macports.org/> Ports system for OS X
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