[MacPorts] #40085: py27-rpy2 segfault; fixed by new version
#40085: py27-rpy2 segfault; fixed by new version ------------------------+-------------------------------- Reporter: swinbank@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: py-rpy ------------------------+-------------------------------- The (rather old) version 2.2.1 of rpy2 shipped by Macports segfaults on import: {{{ $ python Python 2.7.5 (default, Aug 1 2013, 01:01:17) [GCC 4.2.1 Compatible Apple Clang 4.1 ((tags/Apple/clang-421.11.66))] on darwin Type "help", "copyright", "credits" or "license" for more information.
import rpy2.rinterface Segmentation fault: 11 }}}
See attached for details. The current upstream version 2.3.6 does not have this problem. I attach an updated Portfile which bumps the version to 2.3.6. -- Ticket URL: <https://trac.macports.org/ticket/40085> MacPorts <http://www.macports.org/> Ports system for OS X
#40085: py27-rpy2 segfault; fixed by new version -------------------------+-------------------------------- Reporter: swinbank@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Resolution: | Keywords: Port: py-rpy2 | -------------------------+-------------------------------- Changes (by macsforever2000@…): * type: defect => update * port: py-rpy => py-rpy2 Comment: [http://guide.macports.org/#development.patches Per the guidelines], please instead attach unified diff of the Portfile. -- Ticket URL: <https://trac.macports.org/ticket/40085#comment:1> MacPorts <http://www.macports.org/> Ports system for OS X
#40085: py27-rpy2 segfault; fixed by new version -------------------------+-------------------------------- Reporter: swinbank@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Resolution: | Keywords: Port: py-rpy2 | -------------------------+-------------------------------- Comment (by buchere@…): alternatively: port install py27-pip and then installing the latest version of rpy2 (2.3.8) by: pip-2.7 install rpy2 here the bug track from rpy2 why the segmentation error whit R verion 3.0.2 happens: https://bitbucket.org/lgautier/rpy2/issue/150/rpy2-crashes-upon-import- with-r-302 best, bue -- Ticket URL: <https://trac.macports.org/ticket/40085#comment:2> MacPorts <http://www.macports.org/> Ports system for OS X
#40085: py27-rpy2 segfault; fixed by new version -------------------------+-------------------------------- Reporter: swinbank@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Resolution: | Keywords: haspatch Port: py-rpy2 | -------------------------+-------------------------------- Changes (by macsforever2000@…): * keywords: => haspatch -- Ticket URL: <https://trac.macports.org/ticket/40085#comment:5> MacPorts <http://www.macports.org/> Ports system for OS X
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