#30309: Geos 3.3.0 installation problem on Lion -------------------------------+-------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Keywords: lion | Port: geos -------------------------------+-------------------------------------------- Comment(by jacobu@…): Apparently on Lion, ar is buggy, and that might be what's causing the issue. I'm not sure if it's related, but Atlas didn't compile either due to an ar bug ([https://trac.macports.org/ticket/30280 30280]). The maintainer ended up writing a shell script and used libtool to emulate ar. Not sure if a similar fix might work here. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:2> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv -------------------------------+-------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Keywords: lion | Port: geos -------------------------------+-------------------------------------------- Changes (by ryandesign@…): * cc: nlebedev@… (added) Old description:

When installing Geos 3.3.0 (for PostGIS), I got the following error:

{{{ :info:build Undefined symbols for architecture x86_64: :info:build "__ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv", referenced from: :info:build virtual thunk to geos::geom::GeometryCollection::computeEnvelopeInternal() constin GeometryCollection.o :info:build "std::auto_ptr<geos::geom::Envelope>::auto_ptr(std::auto_ptr_ref<geos::geom::Envelope>)", referenced from: :info:build virtual thunk to geos::geom::GeometryCollection::computeEnvelopeInternal() constin GeometryCollection.o :info:build ld: symbol(s) not found for architecture x86_64 :info:build collect2: ld returned 1 exit status :info:build make[2]: *** [libgeos.la] Error 1 :info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0/src' :info:build make[1]: *** [all-recursive] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0/src' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0' :info:build shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0" && /usr/bin/make -j2 -w all " returned error 2 :error:build Target org.macports.build returned: shell command failed (see log for details) }}}

It did work if I installed Geos as follows:

sudo port install geos configure.cc=gcc-4.2 configure.cxx=g++-4.2

New description: When installing Geos 3.3.0 (for PostGIS), I got the following error: {{{ :info:build Undefined symbols for architecture x86_64: :info:build "__ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv", referenced from: :info:build virtual thunk to geos::geom::GeometryCollection::computeEnvelopeInternal() constin GeometryCollection.o :info:build "std::auto_ptr<geos::geom::Envelope>::auto_ptr(std::auto_ptr_ref<geos::geom::Envelope>)", referenced from: :info:build virtual thunk to geos::geom::GeometryCollection::computeEnvelopeInternal() constin GeometryCollection.o :info:build ld: symbol(s) not found for architecture x86_64 :info:build collect2: ld returned 1 exit status :info:build make[2]: *** [libgeos.la] Error 1 :info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0/src' :info:build make[1]: *** [all-recursive] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0/src' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0' :info:build shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_geos/geos/work/geos-3.3.0" && /usr/bin/make -j2 -w all " returned error 2 :error:build Target org.macports.build returned: shell command failed (see log for details) }}} It did work if I installed Geos as follows: {{{ sudo port install geos configure.cc=gcc-4.2 configure.cxx=g++-4.2 }}} -- Comment: Has duplicate #30655. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:7> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv -------------------------------+-------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Keywords: lion | Port: geos -------------------------------+-------------------------------------------- Comment(by vince@…): There are a lot of bugs with geos. Trying to compile with clang leads to a bunch of errors; llvm-gcc, as you have found out, leaves alone a routine. I've posted a bug report upstream, I'm waiting for an answer, but during the holidays, it might be delayed for a while. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:11> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv --------------------------------+------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: reopened Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Resolution: | Keywords: lion Port: geos | --------------------------------+------------------------------------------- Changes (by calvin@…): * status: closed => reopened * resolution: fixed => Comment: Doesn't seem to work for me even by forcing gcc-4.2 as mentioned above. {{{ sudo port install geos configure.cc=gcc-4.2 configure.cxx=g++-4.2 }}} xcode 4.2 does not seem to have gcc-4.2 anymore. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:15> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv --------------------------------+------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: reopened Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Resolution: | Keywords: lion Port: geos | --------------------------------+------------------------------------------- Changes (by ryandesign@…): * cc: calvin@… (added) Comment: Calvin, please see my remark in the ticket. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:17> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv --------------------------------+------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: reopened Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Resolution: | Keywords: lion Port: geos | --------------------------------+------------------------------------------- Comment(by ryandesign@…): This shows it's using the compiler "g++"; it should be using the complete path to the apple-gcc42 g++ compiler. It's also not a complete log. Can you clean and try again, and attach the complete main.log if it fails again? Do not specify a compiler; just let the port select it for you: {{{ sudo port clean geos sudo port install geos }}} -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:19> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv --------------------------------+------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: reopened Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Resolution: | Keywords: lion Port: geos | --------------------------------+------------------------------------------- Comment(by ryandesign@…): Thanks! I now realize this is a MacPorts base bug.We didn't have a ticket for this problem so I filed one: #31709. It'll be fixed in the next version of MacPorts. I also worked around the problem in geos in r86214. Please "sudo port selfupdate" and "sudo port clean geos" and try again. -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:22> MacPorts <http://www.macports.org/> Ports system for Mac OS

#30309: geos @3.3.0: Undefined symbols __ZNSt8auto_ptrIN4geos4geom8EnvelopeEEcvSt12auto_ptr_refIT_EIS2_EEv --------------------------------+------------------------------------------- Reporter: pico303@… | Owner: opendarwin@… Type: defect | Status: closed Priority: Normal | Milestone: Component: ports | Version: 2.0.0 Resolution: fixed | Keywords: lion Port: geos | --------------------------------+------------------------------------------- Changes (by ryandesign@…): * status: reopened => closed * resolution: => fixed -- Ticket URL: <https://trac.macports.org/ticket/30309#comment:24> MacPorts <http://www.macports.org/> Ports system for Mac OS