#48281: py27-pygrib @1.9.9: ld: library not found for -lopenjpeg ------------------------------------+---------------------- Reporter: christopher.edwards@… | Owner: jswhit@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Resolution: | Keywords: Port: py27-pygrib | ------------------------------------+---------------------- Changes (by ryandesign@…): * keywords: pygrib => * owner: macports-tickets@… => jswhit@… * port: => py27-pygrib Old description:

I have tried to install/build through Macports and src with no luck. Attached MACPORT Log.

Building version 2.0.0 Output:

python setup.py build reading from setup.cfg...running build running build_py running build_ext building 'pygrib' extension cc -fno-strict-aliasing -fno-common -dynamic -arch x86_64 -arch i386 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch x86_64 -arch i386 -pipe -I/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/numpy/core/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/jasper -I/opt/local/include -I/usr/include -I/usr/include -Ig2clib_src -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c pygrib.c -o build/temp.macosx-10.9-intel-2.7/pygrib.o pygrib.c:12092:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:12502:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:16175:53: warning: passing 'void **' to parameter of type 'const void **' discards qualifiers in nested pointer types [-Wincompatible- pointer-types-discards-qualifiers] __pyx_v_err = grib_get_message(__pyx_v_self->_gh, (&__pyx_v_message), (&__pyx_v_size)); ^~~~~~~~~~~~~~~~~~ /opt/local/include/grib_api.h:562:51: note: passing argument to parameter 'message' here int grib_get_message(grib_handle* h ,const void** message, size_t *message_length ); ^ pygrib.c:35462:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { ^ pygrib.c:301:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ pygrib.c:35577:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ pygrib.c:33784:28: warning: unused function '__Pyx_CyFunction_InitDefaults' [-Wunused-function] static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { ^ pygrib.c:33793:27: warning: unused function '__Pyx_CyFunction_SetDefaultsTuple' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { ^ pygrib.c:33798:27: warning: unused function '__Pyx_CyFunction_SetDefaultsKwDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33803:27: warning: unused function '__Pyx_CyFunction_SetAnnotationsDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33901:27: warning: unused function '__Pyx_ErrFetch' [-Wunused- function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ pygrib.c:34412:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34426:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34520:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { ^ pygrib.c:35241:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { ^ 15 warnings generated. pygrib.c:12092:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:12502:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:16175:53: warning: passing 'void **' to parameter of type 'const void **' discards qualifiers in nested pointer types [-Wincompatible- pointer-types-discards-qualifiers] __pyx_v_err = grib_get_message(__pyx_v_self->_gh, (&__pyx_v_message), (&__pyx_v_size)); ^~~~~~~~~~~~~~~~~~ /opt/local/include/grib_api.h:562:51: note: passing argument to parameter 'message' here int grib_get_message(grib_handle* h ,const void** message, size_t *message_length ); ^ pygrib.c:35462:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { ^ pygrib.c:301:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ pygrib.c:35577:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ pygrib.c:33784:28: warning: unused function '__Pyx_CyFunction_InitDefaults' [-Wunused-function] static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { ^ pygrib.c:33793:27: warning: unused function '__Pyx_CyFunction_SetDefaultsTuple' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { ^ pygrib.c:33798:27: warning: unused function '__Pyx_CyFunction_SetDefaultsKwDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33803:27: warning: unused function '__Pyx_CyFunction_SetAnnotationsDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33901:27: warning: unused function '__Pyx_ErrFetch' [-Wunused- function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ pygrib.c:34412:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34426:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34520:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { ^ pygrib.c:35241:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { ^ 15 warnings generated. cc -bundle -undefined dynamic_lookup -arch x86_64 -arch i386 -Wl,-F. build/temp.macosx-10.9-intel-2.7/pygrib.o -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/usr/lib -L/usr/lib64 -L/usr/lib -L/usr/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/usr/lib -L/usr/lib64 -L/usr/lib -L/usr/lib64 -lgrib_api -ljasper -lopenjpeg -lpng -lz -o build/lib.macosx-10.9-intel-2.7/pygrib.so ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: library not found for -lopenjpeg clang: error: linker command failed with exit code 1 (use -v to see invocation) error: command 'cc' failed with exit status 1

New description: I have tried to install/build through Macports and src with no luck. Attached MACPORT Log. Building version 2.0.0 Output: {{{ python setup.py build reading from setup.cfg...running build running build_py running build_ext building 'pygrib' extension cc -fno-strict-aliasing -fno-common -dynamic -arch x86_64 -arch i386 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch x86_64 -arch i386 -pipe -I/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/numpy/core/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/jasper -I/opt/local/include -I/usr/include -I/usr/include -Ig2clib_src -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c pygrib.c -o build/temp.macosx-10.9-intel-2.7/pygrib.o pygrib.c:12092:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:12502:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:16175:53: warning: passing 'void **' to parameter of type 'const void **' discards qualifiers in nested pointer types [-Wincompatible- pointer-types-discards-qualifiers] __pyx_v_err = grib_get_message(__pyx_v_self->_gh, (&__pyx_v_message), (&__pyx_v_size)); ^~~~~~~~~~~~~~~~~~ /opt/local/include/grib_api.h:562:51: note: passing argument to parameter 'message' here int grib_get_message(grib_handle* h ,const void** message, size_t *message_length ); ^ pygrib.c:35462:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { ^ pygrib.c:301:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ pygrib.c:35577:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ pygrib.c:33784:28: warning: unused function '__Pyx_CyFunction_InitDefaults' [-Wunused-function] static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { ^ pygrib.c:33793:27: warning: unused function '__Pyx_CyFunction_SetDefaultsTuple' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { ^ pygrib.c:33798:27: warning: unused function '__Pyx_CyFunction_SetDefaultsKwDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33803:27: warning: unused function '__Pyx_CyFunction_SetAnnotationsDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33901:27: warning: unused function '__Pyx_ErrFetch' [-Wunused- function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ pygrib.c:34412:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34426:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34520:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { ^ pygrib.c:35241:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { ^ 15 warnings generated. pygrib.c:12092:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:12502:18: warning: assigning to 'char *' from 'const char *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] __pyx_v_name = grib_keys_iterator_get_name(__pyx_v_gi); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pygrib.c:16175:53: warning: passing 'void **' to parameter of type 'const void **' discards qualifiers in nested pointer types [-Wincompatible- pointer-types-discards-qualifiers] __pyx_v_err = grib_get_message(__pyx_v_self->_gh, (&__pyx_v_message), (&__pyx_v_size)); ^~~~~~~~~~~~~~~~~~ /opt/local/include/grib_api.h:562:51: note: passing argument to parameter 'message' here int grib_get_message(grib_handle* h ,const void** message, size_t *message_length ); ^ pygrib.c:35462:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { ^ pygrib.c:301:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ pygrib.c:35577:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ pygrib.c:33784:28: warning: unused function '__Pyx_CyFunction_InitDefaults' [-Wunused-function] static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { ^ pygrib.c:33793:27: warning: unused function '__Pyx_CyFunction_SetDefaultsTuple' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { ^ pygrib.c:33798:27: warning: unused function '__Pyx_CyFunction_SetDefaultsKwDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33803:27: warning: unused function '__Pyx_CyFunction_SetAnnotationsDict' [-Wunused-function] static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { ^ pygrib.c:33901:27: warning: unused function '__Pyx_ErrFetch' [-Wunused- function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ pygrib.c:34412:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34426:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ pygrib.c:34520:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { ^ pygrib.c:35241:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { ^ 15 warnings generated. cc -bundle -undefined dynamic_lookup -arch x86_64 -arch i386 -Wl,-F. build/temp.macosx-10.9-intel-2.7/pygrib.o -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/usr/lib -L/usr/lib64 -L/usr/lib -L/usr/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/opt/local/lib -L/opt/local/lib64 -L/usr/lib -L/usr/lib64 -L/usr/lib -L/usr/lib64 -lgrib_api -ljasper -lopenjpeg -lpng -lz -o build/lib.macosx-10.9-intel-2.7/pygrib.so ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/usr/lib64' ld: library not found for -lopenjpeg clang: error: linker command failed with exit code 1 (use -v to see invocation) error: command 'cc' failed with exit status 1 }}} -- Comment: Looks like maybe a dependency on port openjpeg15 is needed. -- Ticket URL: <https://trac.macports.org/ticket/48281#comment:1> MacPorts <https://www.macports.org/> Ports system for OS X

#48281: py27-pygrib @1.9.9: ld: library not found for -lopenjpeg ------------------------------------+---------------------- Reporter: christopher.edwards@… | Owner: jswhit@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Resolution: | Keywords: Port: py27-pygrib | ------------------------------------+---------------------- Comment (by christopher.edwards@…): Also I have port info openjpeg openjpeg @2.1.0 (graphics) -- Ticket URL: <https://trac.macports.org/ticket/48281#comment:3> MacPorts <https://www.macports.org/> Ports system for OS X

#48281: py27-pygrib @1.9.9: ld: library not found for -lopenjpeg ------------------------------------+---------------------- Reporter: christopher.edwards@… | Owner: jswhit@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Resolution: | Keywords: Port: py27-pygrib | ------------------------------------+---------------------- Changes (by ryandesign@…): * cc: takeshi@… (added) Comment: The grib_api port (on which the py-pygrib port depends) was changed in June to use openjpeg2 (libopenjp2) instead of openjpeg15 (libopenjpeg). py-pygrib might need a revbump to pick that up, or a patch or version update. However, see also #49096 in which it is proposed that grib_api might switch back to openjpeg15. -- Ticket URL: <https://trac.macports.org/ticket/48281#comment:5> MacPorts <https://www.macports.org/> Ports system for OS X