[30473] trunk/dports/python/py-biopython

[source_changes at macosforge.org]

Revision: 30473
          http://trac.macosforge.org/projects/macports/changeset/30473
Author:   mww at macports.org
Date:     2007-10-28 15:37:45 -0700 (Sun, 28 Oct 2007)

Log Message:
-----------
version 1.44

Modified Paths:
--------------
    trunk/dports/python/py-biopython/Portfile

Added Paths:
-----------
    trunk/dports/python/py-biopython/files/
    trunk/dports/python/py-biopython/files/patch-setup.py

Modified: trunk/dports/python/py-biopython/Portfile
===================================================================
--- trunk/dports/python/py-biopython/Portfile	2007-10-28 22:23:27 UTC (rev 30472)
+++ trunk/dports/python/py-biopython/Portfile	2007-10-28 22:37:45 UTC (rev 30473)
@@ -4,7 +4,7 @@
 PortGroup python24 1.0
 
 name			py-biopython
-version			1.42
+version			1.44
 categories		python science
 maintainers		mww
 platforms		darwin
@@ -16,12 +16,15 @@
 homepage		http://www.biopython.org/
 master_sites	${homepage}/DIST
 distname		biopython-${version}
-checksums		sha1 107321d782b0a00bc3c302cd8c7e4b82c013d6d7
+checksums		sha1 ca2a35c9e92a219256fe4fc2a232df5328f9f5d9
+patchfiles		patch-setup.py
 
 depends_lib-append	port:py-numeric \
 				port:py-mx \
 				port:py-reportlab
 
+build.env	CFLAGS=-I${python.include}
+
 test.run		no
 test.cmd		${build.cmd}
 test.target		test

Added: trunk/dports/python/py-biopython/files/patch-setup.py
===================================================================
--- trunk/dports/python/py-biopython/files/patch-setup.py	                        (rev 0)
+++ trunk/dports/python/py-biopython/files/patch-setup.py	2007-10-28 22:37:45 UTC (rev 30473)
@@ -0,0 +1,11 @@
+--- setup.py	2007-10-27 09:11:01.000000000 +0200
++++ setup.py	2007-10-28 23:41:55.000000000 +0100
+@@ -120,7 +120,7 @@
+ 
+ Would you like to build Bio.KDTree ?"""
+ 
+-    if get_yes_or_no (kdtree_msg, 0):
++    if True:
+         NUMPY_PACKAGES.append("Bio.KDTree")
+         NUMPY_EXTENSIONS.append(
+             CplusplusExtension('Bio.KDTree._CKDTree', 

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