[139337] trunk/dports/python/py-tables

[mmoll at macports.org]

Revision: 139337
          https://trac.macports.org/changeset/139337
Author:   mmoll at macports.org
Date:     2015-08-13 07:54:59 -0700 (Thu, 13 Aug 2015)
Log Message:
-----------
py-tables: update to 3.2.1, patch blosc filter (thanks to stromnov). closes #48557 and #48566

Modified Paths:
--------------
    trunk/dports/python/py-tables/Portfile

Added Paths:
-----------
    trunk/dports/python/py-tables/files/
    trunk/dports/python/py-tables/files/patch-c-blosc_hdf5_blosc_filter.c.diff

Modified: trunk/dports/python/py-tables/Portfile
===================================================================
--- trunk/dports/python/py-tables/Portfile	2015-08-13 05:10:18 UTC (rev 139336)
+++ trunk/dports/python/py-tables/Portfile	2015-08-13 14:54:59 UTC (rev 139337)
@@ -7,8 +7,8 @@
 
 set realname        tables
 name                py-${realname}
-version             3.2.0
-revision            1
+version             3.2.1
+revision            0
 categories-append   science
 platforms           darwin
 license             BSD
@@ -23,10 +23,11 @@
                     extremely large amounts of data
 
 homepage            https://pytables.github.io/
-master_sites        http://sourceforge.net/projects/pytables/files/pytables/${version}
+master_sites        https://pypi.python.org/packages/source/t/tables/ \
+                    http://sourceforge.net/projects/pytables/files/pytables/${version}
 
-checksums           rmd160  141f2241a5f5a7f737bb191c9e77f009620eb587 \
-                    sha256  60980e44676bfe463cdd2582ecdacc0b0763b259477015e866f8af72b4cdba44
+checksums           rmd160  b5938223a5ff8f008c41bfe39a4be45b928ef540 \
+                    sha256  212d4f32899a9a0a6b3f865262c20c6ff864fb60e1b8be70f0bbc80137456e31
 
 distname            ${realname}-${version}
 
@@ -44,6 +45,7 @@
                         --bzip2=${prefix} \
                         --lzo=${prefix} \
                         --blosc=${prefix}
+
     pre-destroot {
         # need to wrap this in a pre-destroot phase so that ${mpi.cc} expands to the right value
         if {[mpi_variant_isset]} {
@@ -66,9 +68,20 @@
     }
 
     post-extract {
+        # Fix permissions
+        fs-traverse item ${worksrcpath} {
+            if {[file isdirectory ${item}]} {
+                file attributes ${item} -permissions a+rx
+            } elseif {[file isfile ${item}]} {
+                file attributes ${item} -permissions a+r
+            }
+        }
+
         file rename ${worksrcpath}/src/utils.h ${worksrcpath}/src/xxx_utils.h
     }
 
+    patchfiles-append   patch-c-blosc_hdf5_blosc_filter.c.diff
+
     post-patch {
         eval reinplace "s:utils.h:xxx_utils.h:" [glob ${worksrcpath}/{src,tables}/*.c]
     }

Added: trunk/dports/python/py-tables/files/patch-c-blosc_hdf5_blosc_filter.c.diff
===================================================================
--- trunk/dports/python/py-tables/files/patch-c-blosc_hdf5_blosc_filter.c.diff	                        (rev 0)
+++ trunk/dports/python/py-tables/files/patch-c-blosc_hdf5_blosc_filter.c.diff	2015-08-13 14:54:59 UTC (rev 139337)
@@ -0,0 +1,11 @@
+--- c-blosc/hdf5/blosc_filter.c.orig	2015-08-13 11:58:26.000000000 +0300
++++ c-blosc/hdf5/blosc_filter.c	2015-08-13 11:58:37.000000000 +0300
+@@ -175,7 +175,7 @@
+     int doshuffle = 1;             /* Shuffle default */
+     int compcode;                  /* Blosc compressor */
+     int code;
+-    char *compname = NULL;
++    char *compname = "blosclz";
+     char *complist;
+     char errmsg[256];
+ 
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