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<title>[131063] trunk/dports</title>
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<div id="msg">
<dl class="meta">
<dt>Revision</dt> <dd><a href="https://trac.macports.org/changeset/131063">131063</a></dd>
<dt>Author</dt> <dd>mmoll@macports.org</dd>
<dt>Date</dt> <dd>2015-01-05 09:37:19 -0800 (Mon, 05 Jan 2015)</dd>
</dl>
<h3>Log Message</h3>
<pre>science/hdf5: Update to version 1.8.14 and change default plugin dir location. rev bump all ports that depend on hdf5. closes #46374</pre>
<h3>Modified Paths</h3>
<ul>
<li><a href="#trunkdportsarchiversbloscPortfile">trunk/dports/archivers/blosc/Portfile</a></li>
<li><a href="#trunkdportsdevelluanumluaPortfile">trunk/dports/devel/lua-numlua/Portfile</a></li>
<li><a href="#trunkdportsgisgdalPortfile">trunk/dports/gis/gdal/Portfile</a></li>
<li><a href="#trunkdportsgiskealibPortfile">trunk/dports/gis/kealib/Portfile</a></li>
<li><a href="#trunkdportsgraphicsfield3dPortfile">trunk/dports/graphics/field3d/Portfile</a></li>
<li><a href="#trunkdportsgraphicsvigraPortfile">trunk/dports/graphics/vigra/Portfile</a></li>
<li><a href="#trunkdportsmathdolfinPortfile">trunk/dports/math/dolfin/Portfile</a></li>
<li><a href="#trunkdportsmathgnudatalanguagePortfile">trunk/dports/math/gnudatalanguage/Portfile</a></li>
<li><a href="#trunkdportsmathmatioPortfile">trunk/dports/math/matio/Portfile</a></li>
<li><a href="#trunkdportsmathoctavePortfile">trunk/dports/math/octave/Portfile</a></li>
<li><a href="#trunkdportsmathpetscPortfile">trunk/dports/math/petsc/Portfile</a></li>
<li><a href="#trunkdportsmathshogunPortfile">trunk/dports/math/shogun/Portfile</a></li>
<li><a href="#trunkdportsmathshogundevelPortfile">trunk/dports/math/shogun-devel/Portfile</a></li>
<li><a href="#trunkdportsperlp5pdlPortfile">trunk/dports/perl/p5-pdl/Portfile</a></li>
<li><a href="#trunkdportspythonpyatpyPortfile">trunk/dports/python/py-atpy/Portfile</a></li>
<li><a href="#trunkdportspythonpyh5pyPortfile">trunk/dports/python/py-h5py/Portfile</a></li>
<li><a href="#trunkdportspythonpypynePortfile">trunk/dports/python/py-pyne/Portfile</a></li>
<li><a href="#trunkdportspythonpystfioPortfile">trunk/dports/python/py-stfio/Portfile</a></li>
<li><a href="#trunkdportspythonpytablesPortfile">trunk/dports/python/py-tables/Portfile</a></li>
<li><a href="#trunkdportsscienceH5PartPortfile">trunk/dports/science/H5Part/Portfile</a></li>
<li><a href="#trunkdportssciencealpsPortfile">trunk/dports/science/alps/Portfile</a></li>
<li><a href="#trunkdportssciencearmadilloPortfile">trunk/dports/science/armadillo/Portfile</a></li>
<li><a href="#trunkdportssciencebobPortfile">trunk/dports/science/bob/Portfile</a></li>
<li><a href="#trunkdportssciencecdoPortfile">trunk/dports/science/cdo/Portfile</a></li>
<li><a href="#trunkdportssciencecrystfelPortfile">trunk/dports/science/crystfel/Portfile</a></li>
<li><a href="#trunkdportsscienceflannPortfile">trunk/dports/science/flann/Portfile</a></li>
<li><a href="#trunkdportssciencegradsPortfile">trunk/dports/science/grads/Portfile</a></li>
<li><a href="#trunkdportsscienceh4h5toolsPortfile">trunk/dports/science/h4h5tools/Portfile</a></li>
<li><a href="#trunkdportsscienceh5utilsPortfile">trunk/dports/science/h5utils/Portfile</a></li>
<li><a href="#trunkdportssciencehdf5Portfile">trunk/dports/science/hdf5/Portfile</a></li>
<li><a href="#trunkdportssciencehdfeos5Portfile">trunk/dports/science/hdfeos5/Portfile</a></li>
<li><a href="#trunkdportssciencemagicsppPortfile">trunk/dports/science/magicspp/Portfile</a></li>
<li><a href="#trunkdportssciencencargPortfile">trunk/dports/science/ncarg/Portfile</a></li>
<li><a href="#trunkdportssciencencoPortfile">trunk/dports/science/nco/Portfile</a></li>
<li><a href="#trunkdportssciencencviewPortfile">trunk/dports/science/ncview/Portfile</a></li>
<li><a href="#trunkdportssciencenetcdfPortfile">trunk/dports/science/netcdf/Portfile</a></li>
<li><a href="#trunkdportssciencenetcdfcxxPortfile">trunk/dports/science/netcdf-cxx/Portfile</a></li>
<li><a href="#trunkdportssciencenetcdfcxx4Portfile">trunk/dports/science/netcdf-cxx4/Portfile</a></li>
<li><a href="#trunkdportssciencesiloPortfile">trunk/dports/science/silo/Portfile</a></li>
<li><a href="#trunkdportssciencesplashPortfile">trunk/dports/science/splash/Portfile</a></li>
<li><a href="#trunkdportssciencestimfitPortfile">trunk/dports/science/stimfit/Portfile</a></li>
<li><a href="#trunkdportsscienceswarmPortfile">trunk/dports/science/swarm/Portfile</a></li>
<li><a href="#trunkdportssciencevaporPortfile">trunk/dports/science/vapor/Portfile</a></li>
<li><a href="#trunkdportssciencewgrib2Portfile">trunk/dports/science/wgrib2/Portfile</a></li>
<li><a href="#trunkdportsscienceyorickhdf5Portfile">trunk/dports/science/yorick-hdf5/Portfile</a></li>
</ul>
</div>
<div id="patch">
<h3>Diff</h3>
<a id="trunkdportsarchiversbloscPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/archivers/blosc/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/archivers/blosc/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/archivers/blosc/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx"> PortGroup github 1.0
</span><span class="cx">
</span><span class="cx"> github.setup Blosc c-blosc 1.5.1 v
</span><del>-revision 0
</del><ins>+revision 1
</ins><span class="cx"> name blosc
</span><span class="cx"> categories archivers devel
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportsdevelluanumluaPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/devel/lua-numlua/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/devel/lua-numlua/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/devel/lua-numlua/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -4,7 +4,7 @@
</span><span class="cx"> PortGroup github 1.0
</span><span class="cx">
</span><span class="cx"> github.setup carvalho numlua 0.3
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> name lua-numlua
</span><span class="cx"> license MIT
</span><span class="cx"> categories devel
</span></span></pre></div>
<a id="trunkdportsgisgdalPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/gis/gdal/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/gis/gdal/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/gis/gdal/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name gdal
</span><span class="cx"> version 1.11.1
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> categories gis
</span><span class="cx"> license MIT BSD
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportsgiskealibPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/gis/kealib/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/gis/kealib/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/gis/kealib/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,6 +7,7 @@
</span><span class="cx"> bitbucket.setup chchrsc kealib c6d36f3
</span><span class="cx"> categories gis
</span><span class="cx"> version 1.4.2.20140825
</span><ins>+revision 1
</ins><span class="cx"> license MIT
</span><span class="cx"> maintainers vince
</span><span class="cx"> description KEAlib - Implements KEA file format into HDF5 format
</span></span></pre></div>
<a id="trunkdportsgraphicsfield3dPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/graphics/field3d/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/graphics/field3d/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/graphics/field3d/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> github.setup imageworks Field3D 1.3.2 v
</span><span class="cx"> name field3d
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> categories graphics
</span><span class="cx"> maintainers blair
</span><span class="cx"> license BSD
</span></span></pre></div>
<a id="trunkdportsgraphicsvigraPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/graphics/vigra/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/graphics/vigra/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/graphics/vigra/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -10,7 +10,7 @@
</span><span class="cx">
</span><span class="cx"> github.setup ukoethe vigra 1-10-0 Version-
</span><span class="cx"> version [strsed ${github.version} {g/-/./}]
</span><del>-revision 4
</del><ins>+revision 5
</ins><span class="cx"> categories graphics
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers gmail.com:benjamin.seppke
</span></span></pre></div>
<a id="trunkdportsmathdolfinPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/dolfin/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/dolfin/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/dolfin/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx"> PortGroup mpi 1.0
</span><span class="cx">
</span><span class="cx"> bitbucket.setup fenics-project dolfin 1.4.0 dolfin-
</span><del>-revision 3
</del><ins>+revision 4
</ins><span class="cx"> categories math
</span><span class="cx"> license LGPL-3+
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportsmathgnudatalanguagePortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/gnudatalanguage/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/gnudatalanguage/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/gnudatalanguage/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -8,7 +8,7 @@
</span><span class="cx">
</span><span class="cx"> name gnudatalanguage
</span><span class="cx"> version 0.9.5
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> epoch 1
</span><span class="cx">
</span><span class="cx"> compilers.choose cc cxx
</span></span></pre></div>
<a id="trunkdportsmathmatioPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/matio/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/matio/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/matio/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name matio
</span><span class="cx"> version 1.5.2
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> set branch [join [lrange [split ${version} .] 0 1] .]
</span><span class="cx"> maintainers nomaintainer
</span><span class="cx"> license LGPL-2.1
</span></span></pre></div>
<a id="trunkdportsmathoctavePortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/octave/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/octave/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/octave/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -9,7 +9,7 @@
</span><span class="cx"> name octave
</span><span class="cx">
</span><span class="cx"> version 3.8.2
</span><del>-revision 2
</del><ins>+revision 3
</ins><span class="cx"> #conflicts octave-devel
</span><span class="cx"> categories math science
</span><span class="cx"> maintainers michaelld openmaintainer
</span></span></pre></div>
<a id="trunkdportsmathpetscPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/petsc/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/petsc/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/petsc/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx"> PortGroup mpi 1.0
</span><span class="cx">
</span><span class="cx"> bitbucket.setup petsc petsc 3.5.2 v
</span><del>-revision 2
</del><ins>+revision 3
</ins><span class="cx"> categories math science
</span><span class="cx"> maintainers sean
</span><span class="cx"> license BSD
</span></span></pre></div>
<a id="trunkdportsmathshogunPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/shogun/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/shogun/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/shogun/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx"> name shogun
</span><span class="cx"> version 2.1.0
</span><span class="cx"> set branch [join [lrange [split ${version} .] 0 1] .]
</span><del>-revision 6
</del><ins>+revision 7
</ins><span class="cx"> categories math science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license GPL-3
</span></span></pre></div>
<a id="trunkdportsmathshogundevelPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/math/shogun-devel/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/math/shogun-devel/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/math/shogun-devel/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx"> name shogun-devel
</span><span class="cx"> version 3.2.0
</span><span class="cx"> set branch [join [lrange [split ${version} .] 0 1] .]
</span><del>-revision 0
</del><ins>+revision 1
</ins><span class="cx"> categories math science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license GPL-3
</span></span></pre></div>
<a id="trunkdportsperlp5pdlPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/perl/p5-pdl/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/perl/p5-pdl/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/perl/p5-pdl/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> perl5.branches 5.16 5.18 5.20
</span><span class="cx"> perl5.setup PDL 2.007
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> maintainers peculier.com:mgrimes openmaintainer
</span><span class="cx"> license {Artistic-1 GPL}
</span><span class="cx"> description Perl Data Language - scientific computing capability for perl
</span></span></pre></div>
<a id="trunkdportspythonpyatpyPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/python/py-atpy/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/python/py-atpy/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/python/py-atpy/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name py-atpy
</span><span class="cx"> version 0.9.7
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> maintainers robitaille
</span><span class="cx">
</span><span class="cx"> categories-append science
</span></span></pre></div>
<a id="trunkdportspythonpyh5pyPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/python/py-h5py/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/python/py-h5py/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/python/py-h5py/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx"> name py-h5py
</span><span class="cx"> version 2.3.1
</span><span class="cx"> # h5py needs to be re-built after hdf5 upgrades
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx">
</span><span class="cx"> checksums \
</span><span class="cx"> rmd160 56b17092dd8d8a4ab949e0d3769b6e90bebf6cc1 \
</span></span></pre></div>
<a id="trunkdportspythonpypynePortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/python/py-pyne/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/python/py-pyne/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/python/py-pyne/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,6 +7,7 @@
</span><span class="cx">
</span><span class="cx"> github.setup pyne pyne 0.4.1
</span><span class="cx">
</span><ins>+revision 1
</ins><span class="cx"> name py-pyne
</span><span class="cx"> categories-append science
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportspythonpystfioPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/python/py-stfio/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/python/py-stfio/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/python/py-stfio/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,6 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name py-stfio
</span><span class="cx"> version 0.14.0
</span><ins>+revision 1
</ins><span class="cx"> categories python science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license GPL-2
</span></span></pre></div>
<a id="trunkdportspythonpytablesPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/python/py-tables/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/python/py-tables/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/python/py-tables/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -8,7 +8,7 @@
</span><span class="cx"> set realname tables
</span><span class="cx"> name py-${realname}
</span><span class="cx"> version 3.1.1
</span><del>-revision 3
</del><ins>+revision 4
</ins><span class="cx"> categories-append science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license BSD
</span></span></pre></div>
<a id="trunkdportsscienceH5PartPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/H5Part/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/H5Part/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/H5Part/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name H5Part
</span><span class="cx"> version 1.6.6
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> categories science
</span><span class="cx"> maintainers lbl.gov:ghweber
</span><span class="cx"> license BSD
</span></span></pre></div>
<a id="trunkdportssciencealpsPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/alps/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/alps/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/alps/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx">
</span><span class="cx"> name alps
</span><span class="cx"> version 2.1.1
</span><del>-revision 6
</del><ins>+revision 7
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers gmail.com:gamperl
</span></span></pre></div>
<a id="trunkdportssciencearmadilloPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/armadillo/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/armadillo/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/armadillo/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,6 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name armadillo
</span><span class="cx"> version 4.550.3
</span><ins>+revision 1
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers gmail.com:christian.frisson openmaintainer
</span></span></pre></div>
<a id="trunkdportssciencebobPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/bob/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/bob/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/bob/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -8,7 +8,7 @@
</span><span class="cx"> PortGroup compiler_blacklist_versions 1.0
</span><span class="cx">
</span><span class="cx"> github.setup idiap bob 1.2.2 v
</span><del>-revision 6
</del><ins>+revision 7
</ins><span class="cx"> set soversion 1.2
</span><span class="cx"> categories science math devel
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportssciencecdoPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/cdo/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/cdo/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/cdo/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,6 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name cdo
</span><span class="cx"> version 1.6.6
</span><ins>+revision 1
</ins><span class="cx"> platforms darwin
</span><span class="cx"> maintainers takeshi openmaintainer
</span><span class="cx"> license GPL-2
</span></span></pre></div>
<a id="trunkdportssciencecrystfelPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/crystfel/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/crystfel/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/crystfel/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name crystfel
</span><span class="cx"> version 0.5.3a
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license GPL-3
</span></span></pre></div>
<a id="trunkdportsscienceflannPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/flann/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/flann/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/flann/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name flann
</span><span class="cx"> version 1.8.4
</span><del>-revision 7
</del><ins>+revision 8
</ins><span class="cx"> categories science devel
</span><span class="cx"> maintainers mmoll
</span><span class="cx"> description Fast Library for Approximate Nearest Neighbors
</span></span></pre></div>
<a id="trunkdportssciencegradsPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/grads/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/grads/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/grads/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name grads
</span><span class="cx"> version 2.0.2
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> set branch [join [lrange [split ${version} .] 0 1] .]
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers takeshi
</span></span></pre></div>
<a id="trunkdportsscienceh4h5toolsPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/h4h5tools/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/h4h5tools/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/h4h5tools/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -4,7 +4,7 @@
</span><span class="cx">
</span><span class="cx"> name h4h5tools
</span><span class="cx"> version 2.2.1
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> categories science
</span><span class="cx"> # Equivalent to BSD + explicitly requiring modifications to be documented
</span><span class="cx"> license Permissive
</span></span></pre></div>
<a id="trunkdportsscienceh5utilsPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/h5utils/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/h5utils/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/h5utils/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name h5utils
</span><span class="cx"> version 1.12.1
</span><del>-revision 7
</del><ins>+revision 8
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers ece.pdx.edu:higginja openmaintainer
</span></span></pre></div>
<a id="trunkdportssciencehdf5Portfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/hdf5/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/hdf5/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/hdf5/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx"> PortGroup mpi 1.0
</span><span class="cx">
</span><span class="cx"> name hdf5
</span><del>-version 1.8.13
</del><ins>+version 1.8.14
</ins><span class="cx"> categories science
</span><span class="cx"> maintainers mmoll openmaintainer
</span><span class="cx">
</span><span class="lines">@@ -27,8 +27,9 @@
</span><span class="cx"> http://www.hdfgroup.org/ftp/HDF5/current/src \
</span><span class="cx"> ftp://ftp.hdfgroup.org/HDF5/current/src/ \
</span><span class="cx"> ftp://ftp.hdfgroup.org/HDF5/prev-releases/hdf5-${version}/src/
</span><del>-checksums rmd160 59e690fcc8ce80c438c3d6977729e12a75b5d162 \
- sha256 c2f5a412107aba6f99fd7a4a9db6ce5f5fc8171ec931472784e5839d26aa17ef
</del><ins>+checksums \
+ rmd160 21680eb5c3831870aef116e50b313512f70b624c \
+ sha256 53722cb9f5977af2908f92fc1a3f8c597800a5cb448cfe5c75060d6335bb9bab
</ins><span class="cx">
</span><span class="cx"> mpi.setup
</span><span class="cx">
</span><span class="lines">@@ -43,10 +44,12 @@
</span><span class="cx"> # Upstream suggestion is use -O0. Clang-produced code passes all tests.
</span><span class="cx"> compiler.blacklist llvm-gcc-4.2
</span><span class="cx">
</span><ins>+# Use lib/hdf5 rather than hdf5/lib plugin directory
</ins><span class="cx"> configure.args --with-zlib=yes --enable-filters=all \
</span><span class="cx"> --enable-production --disable-fortran \
</span><span class="cx"> --disable-cxx --enable-shared --enable-static \
</span><del>- --disable-parallel --disable-threadsafe
</del><ins>+ --disable-parallel --disable-threadsafe \
+ --with-default-plugindir=${prefix}/lib/hdf5
</ins><span class="cx">
</span><span class="cx"> # http://mail.hdfgroup.org/pipermail/hdf-forum_hdfgroup.org/2010-March/002682.html
</span><span class="cx"> license NCSA
</span></span></pre></div>
<a id="trunkdportssciencehdfeos5Portfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/hdfeos5/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/hdfeos5/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/hdfeos5/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -7,7 +7,7 @@
</span><span class="cx">
</span><span class="cx"> name hdfeos5
</span><span class="cx"> version 1.15
</span><del>-revision 4
</del><ins>+revision 5
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license public-domain
</span></span></pre></div>
<a id="trunkdportssciencemagicsppPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/magicspp/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/magicspp/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/magicspp/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -10,7 +10,7 @@
</span><span class="cx">
</span><span class="cx"> name magicspp
</span><span class="cx"> version 2.22.6
</span><del>-revision 2
</del><ins>+revision 3
</ins><span class="cx"> platforms darwin
</span><span class="cx"> maintainers takeshi
</span><span class="cx"> license Apache-2
</span></span></pre></div>
<a id="trunkdportssciencencargPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/ncarg/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/ncarg/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/ncarg/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -11,6 +11,7 @@
</span><span class="cx">
</span><span class="cx"> name ncarg
</span><span class="cx"> version 6.2.1
</span><ins>+revision 1
</ins><span class="cx"> categories science
</span><span class="cx"> maintainers takeshi
</span><span class="cx"> license {UCAR-Unidata public-domain BSD LGPL-3 GPL-3}
</span></span></pre></div>
<a id="trunkdportssciencencoPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/nco/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/nco/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/nco/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,6 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name nco
</span><span class="cx"> version 4.4.7
</span><ins>+revision 1
</ins><span class="cx"> platforms darwin
</span><span class="cx"> maintainers takeshi
</span><span class="cx"> license GPL-3
</span></span></pre></div>
<a id="trunkdportssciencencviewPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/ncview/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/ncview/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/ncview/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name ncview
</span><span class="cx"> version 2.1.1
</span><del>-revision 6
</del><ins>+revision 7
</ins><span class="cx"> maintainers nomaintainer
</span><span class="cx"> platforms darwin
</span><span class="cx"> categories science
</span></span></pre></div>
<a id="trunkdportssciencenetcdfPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/netcdf/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/netcdf/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/netcdf/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -9,7 +9,7 @@
</span><span class="cx">
</span><span class="cx"> github.setup Unidata netcdf-c 4.3.2 v
</span><span class="cx"> epoch 2
</span><del>-revision 3
</del><ins>+revision 4
</ins><span class="cx"> name netcdf
</span><span class="cx"> maintainers takeshi openmaintainer
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportssciencenetcdfcxxPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/netcdf-cxx/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/netcdf-cxx/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/netcdf-cxx/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name netcdf-cxx
</span><span class="cx"> version 4.2
</span><del>-revision 6
</del><ins>+revision 7
</ins><span class="cx"> distname ${name}-${version}
</span><span class="cx"> maintainers takeshi openmaintainer
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportssciencenetcdfcxx4Portfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/netcdf-cxx4/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/netcdf-cxx4/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/netcdf-cxx4/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx"> PortGroup mpi 1.0
</span><span class="cx">
</span><span class="cx"> github.setup Unidata netcdf-cxx4 4.2.1 v
</span><del>-revision 3
</del><ins>+revision 4
</ins><span class="cx"> distname ${name}-${version}
</span><span class="cx"> maintainers takeshi openmaintainer
</span><span class="cx"> platforms darwin
</span></span></pre></div>
<a id="trunkdportssciencesiloPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/silo/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/silo/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/silo/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,6 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name silo
</span><span class="cx"> version 4.10.2
</span><ins>+revision 1
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license BSD
</span></span></pre></div>
<a id="trunkdportssciencesplashPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/splash/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/splash/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/splash/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,6 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name splash
</span><span class="cx"> version 2.5.0
</span><ins>+revision 1
</ins><span class="cx"> categories science graphics
</span><span class="cx"> platforms darwin
</span><span class="cx"> maintainers monash.edu:daniel.price
</span></span></pre></div>
<a id="trunkdportssciencestimfitPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/stimfit/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/stimfit/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/stimfit/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,6 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name stimfit
</span><span class="cx"> version 0.14.0
</span><ins>+revision 1
</ins><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="cx"> license GPL-2
</span></span></pre></div>
<a id="trunkdportsscienceswarmPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/swarm/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/swarm/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/swarm/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name swarm
</span><span class="cx"> version 2.4.1
</span><del>-revision 9
</del><ins>+revision 10
</ins><span class="cx"> categories science
</span><span class="cx"> maintainers nomaintainer
</span><span class="cx"> license GPL-2
</span></span></pre></div>
<a id="trunkdportssciencevaporPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/vapor/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/vapor/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/vapor/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -5,7 +5,7 @@
</span><span class="cx">
</span><span class="cx"> name vapor
</span><span class="cx"> version 2.2.4
</span><del>-revision 4
</del><ins>+revision 5
</ins><span class="cx"> categories science
</span><span class="cx"> maintainers nomaintainer
</span><span class="cx"> description interactive 3D scientific visualization environment
</span></span></pre></div>
<a id="trunkdportssciencewgrib2Portfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/wgrib2/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/wgrib2/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/wgrib2/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> name wgrib2
</span><span class="cx"> version 2.0.0
</span><del>-revision 1
</del><ins>+revision 2
</ins><span class="cx"> platforms darwin
</span><span class="cx"> maintainers takeshi
</span><span class="cx"> license public-domain
</span></span></pre></div>
<a id="trunkdportsscienceyorickhdf5Portfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/yorick-hdf5/Portfile (131062 => 131063)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/yorick-hdf5/Portfile 2015-01-05 17:17:17 UTC (rev 131062)
+++ trunk/dports/science/yorick-hdf5/Portfile 2015-01-05 17:37:19 UTC (rev 131063)
</span><span class="lines">@@ -6,7 +6,7 @@
</span><span class="cx">
</span><span class="cx"> set uname hdf5
</span><span class="cx"> github.setup frigaut yorick-${uname} 0.8.0
</span><del>-revision 5
</del><ins>+revision 6
</ins><span class="cx"> license GPL-2+
</span><span class="cx"> categories science yorick
</span><span class="cx"> platforms darwin
</span></span></pre>
</div>
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