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<title>[143272] trunk/dports/science/abinit/Portfile</title>
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<dt>Revision</dt> <dd><a href="https://trac.macports.org/changeset/143272">143272</a></dd>
<dt>Author</dt> <dd>dstrubbe@macports.org</dd>
<dt>Date</dt> <dd>2015-12-09 11:12:22 -0800 (Wed, 09 Dec 2015)</dd>
</dl>
<h3>Log Message</h3>
<pre>abinit: Maintainer timeout, ticket #45617.
* Updating to 7.10.5
* Using compilers and mpi portgroups
* Adds support for gcc5 and gcc6, and understanding of +gfortran in dependencies; support for devel MPI ports
* Great simplification of enforcement of Fortran variants etc. in pre-fetch.
* Disabled +atompaw, since it (like the +bigdft variant) downloads some code itself in the build step.
* Fixed livecheck.
* Presence of Fortran variant for fftw-3 and fftw-3-single is checked.
* Apparently OpenMPI would not use MPI2 here before; I expect this is related to a bug in OpenMPI (or its packaging) that I found with octopus, and was fixed some time ago (#39826). Now MPI2 is enabled always.
* +g95 is usable now (though not with threads).
* Removed unnecessary statement "build.cmd make" which is the default.
* cxx compiler is not specified since it does not appear to be used in abinit.</pre>
<h3>Modified Paths</h3>
<ul>
<li><a href="#trunkdportsscienceabinitPortfile">trunk/dports/science/abinit/Portfile</a></li>
</ul>
</div>
<div id="patch">
<h3>Diff</h3>
<a id="trunkdportsscienceabinitPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/abinit/Portfile (143271 => 143272)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/abinit/Portfile 2015-12-09 19:02:43 UTC (rev 143271)
+++ trunk/dports/science/abinit/Portfile 2015-12-09 19:12:22 UTC (rev 143272)
</span><span class="lines">@@ -2,10 +2,10 @@
</span><span class="cx"> # $Id$
</span><span class="cx">
</span><span class="cx"> PortSystem 1.0
</span><del>-PortGroup active_variants 1.1
</del><ins>+PortGroup mpi 1.0
</ins><span class="cx">
</span><span class="cx"> name abinit
</span><del>-version 7.10.2
</del><ins>+version 7.10.5
</ins><span class="cx"> revision 2
</span><span class="cx"> categories science
</span><span class="cx"> platforms darwin
</span><span class="lines">@@ -32,19 +32,19 @@
</span><span class="cx"> homepage http://www.abinit.org
</span><span class="cx"> master_sites http://ftp.abinit.org/
</span><span class="cx">
</span><del>-checksums rmd160 cf4078c1eab2cc3200e084379738939cafda5ba2 \
- sha256 cbead80096d97f1c8d08ccb3b9b2851ac1e56accaebe551d9ab29757e9cd531e
</del><ins>+checksums rmd160 f77a9db5bcd97bcc46ea11a96bbf8f17cb1a19b3 \
+ sha256 e9376a3e34790bce90992f28e5fa8554b51ba467bf5709c7fd25d300e7c4f56a
</ins><span class="cx">
</span><del>-depends_lib port:atlas
</del><ins>+# or vecLibFort, or OpenBLAS(-devel)
+depends_lib-append port:atlas
</ins><span class="cx">
</span><del>-configure.args --with-linalg-flavor="atlas" --enable-gw-dpc
</del><ins>+compilers.choose cc fc
+# g95 is not compatible with OpenMP
+mpi.setup default require_fortran -g95
+
+configure.args-append --with-linalg-flavor="atlas" --enable-gw-dpc --enable-fox
</ins><span class="cx"> configure.optflags -O3
</span><span class="cx">
</span><del>-# FIXME: not right for g95? would be -ffree-line-length-huge. This is really the configure script's job? Not easy to set this right for MPI g95.
-# If this is not set, there will be some compilation failures, due to inadequate provisions by the code for compilers that don't accept long lines.
-configure.fcflags-append -ffree-line-length-none
-
-build.cmd make
</del><span class="cx"> use_parallel_build yes
</span><span class="cx">
</span><span class="cx"> # We do not need to use ABINIT's own approach to parallel builds, which only is relevant if
</span><span class="lines">@@ -54,80 +54,19 @@
</span><span class="cx">
</span><span class="cx"> default_variants +etsf_io +libxc
</span><span class="cx"> # Do not put +wannier90 since tests fail for wannier90 use.
</span><del>-if { ![variant_isset gcc46] && ![variant_isset gcc47] && ![variant_isset gcc48] && ![variant_isset gcc49] } {
- if { ![variant_isset openmpi] } {
- default_variants +mpich
- } elseif { ![variant_isset mpich] } {
- default_variants +openmpi
- } else {
- default_variants +gcc49
- }
-}
</del><span class="cx">
</span><del>-# FIXME: use compiler and MPI port groups
-
-pre-fetch {
- set fortran unknown
- set fortrans { gcc42 gcc43 gcc44 gcc45 gcc46 gcc47 gcc48 gcc49 g95 }
-
- foreach fc_name ${fortrans} {
- if { [variant_isset ${fc_name}] } {
- set fortran ${fc_name}
- } elseif { [variant_isset openmpi] } {
- if { [_portnameactive openmpi-default] } {
- if { [active_variants openmpi-default ${fc_name}] } { set fortran ${fc_name} }
- } elseif { [_portnameactive openmpi-devel-default] } {
- if { [active_variants openmpi-devel-default ${fc_name}] } { set fortran ${fc_name} }
- }
- } elseif { [variant_isset mpich] } {
- if { [_portnameactive mpich-default] } {
- if { [active_variants mpich-default ${fc_name}] } { set fortran ${fc_name} }
- } elseif { [_portnameactive mpich-devel-default] } {
- if { [active_variants mpich-devel-default ${fc_name}] } { set fortran ${fc_name} }
- }
</del><ins>+pre-configure {
+ if {[fortran_variant_name] eq "g95"} {
+ configure.fcflags-append -ffree-line-length-huge
+ if {[variant_isset threads]} {
+ ui_error "You can select only one of +g95 and +threads."
+ return -code error "+g95 and +threads are not compatible since g95 does not support OpenMP."
</ins><span class="cx"> }
</span><ins>+ } else {
+ configure.fcflags-append -ffree-line-length-none
</ins><span class="cx"> }
</span><span class="cx">
</span><del>- if { ${fortran} eq "unknown" } {
- if { [variant_isset openmpi] } {
- ui_error "Variant +openmpi requires openmpi to have been built with Fortran support."
- return -code error "Variant +openmpi requires openmpi to have been built with Fortran support."
- } elseif { [variant_isset mpich] } {
- ui_error "Variant +mpich requires mpich-default/mpich-devel-default to have been built with Fortran support."
- return -code error "Variant +mpich requires mpich-default/mpich-devel-default to have been built with Fortran support."
- } else {
- ui_error "Internal error: cannot determine Fortran compiler."
- return -code error "Internal error: cannot determine Fortran compiler."
- }
- }
-
- if { [variant_isset libxc] } {
- if { ![active_variants libxc ${fortran}] } {
- ui_error "libxc must have been built with +${fortran}."
- return -code error "libxc must have been built with +${fortran}."
- }
- }
-
- if { [variant_isset netcdf] } {
- if {![active_variants netcdf-fortran ${fortran}] } {
- ui_error "netcdf-fortran must have been built with +${fortran}."
- return -code error "netcdf-fortran must have been built with +${fortran}."
- }
- }
-
</del><span class="cx"> if { [variant_isset etsf_io] } {
</span><del>- if {![active_variants etsf_io ${fortran}] } {
- ui_error "etsf_io must have been built with +${fortran}."
- return -code error "etsf_io must have been built with +${fortran}."
- }
- }
-
-# No need to check compiler for wannier90
-# No need to check compiler for fftw-3
-}
-
-pre-configure {
- if { [variant_isset etsf_io] } {
</del><span class="cx"> configure.args-append --with-trio-flavor="netcdf+etsf_io"
</span><span class="cx"> } elseif { [variant_isset netcdf] } {
</span><span class="cx"> configure.args-append --with-trio-flavor="netcdf"
</span><span class="lines">@@ -187,52 +126,21 @@
</span><span class="cx"> test.target built-in fast
</span><span class="cx"> # wannier90 test will probably fail.
</span><span class="cx">
</span><del>-variant gcc46 conflicts gcc47 gcc48 gcc49 openmpi mpich description {Build with GCC 4.6} {
- configure.compiler macports-gcc-4.6
- configure.args-append FCCPP="${configure.cpp} -ansi"
-}
-
-variant gcc47 conflicts gcc46 gcc48 gcc49 openmpi mpich description {Build with GCC 4.7} {
- configure.compiler macports-gcc-4.7
- configure.args-append FCCPP="${configure.cpp} -ansi"
-}
-
-variant gcc48 conflicts gcc46 gcc47 gcc49 openmpi mpich description {Build with GCC 4.8} {
- configure.compiler macports-gcc-4.8
- configure.args-append FCCPP="${configure.cpp} -ansi"
-}
-
-variant gcc49 conflicts gcc46 gcc47 gcc48 openmpi mpich description {Build with GCC 4.9} {
- configure.compiler macports-gcc-4.9
- configure.args-append FCCPP="${configure.cpp} -ansi"
-}
-
-variant openmpi conflicts gcc46 gcc47 gcc48 gcc49 mpich description {Build parallel version with OpenMPI} {
- depends_lib-append path:bin/mpif90-openmpi-mp:openmpi-default
- configure.fc mpif90-openmpi-mp
- configure.cc mpicc-openmpi-mp
- configure.cxx mpicxx-openmpi-mp
</del><ins>+pre-configure {
</ins><span class="cx"> configure.args-append FCCPP="${configure.cc} -E -ansi"
</span><del>- configure.args-append --enable-mpi="yes" --enable-mpi-io="yes" --with-mpi-level="1"
- configure.args-append MPI_RUNNER=${prefix}/bin/mpiexec-openmpi-mp
- test.env-append MPIEXEC=${prefix}/bin/mpiexec-openmpi-mp
</del><ins>+ if {[mpi_variant_isset]} {
+ configure.args-append MPI_RUNNER=${mpi.exec}
+ test.env-append MPIEXEC=${mpi.exec}
+ configure.args-append --enable-mpi="yes" --enable-mpi-io="yes"
+ } else {
+ configure.args-append --enable-mpi="no"
+ }
</ins><span class="cx"> }
</span><span class="cx">
</span><del>-variant mpich conflicts gcc46 gcc47 gcc48 gcc49 openmpi description {Build parallel version with MPICH} {
- depends_lib-append path:bin/mpif90-mpich-mp:mpich-default
- configure.fc mpif90-mpich-mp
- configure.cc mpicc-mpich-mp
- configure.cxx mpicxx-mpich-mp
- configure.args-append FCCPP="${configure.cc} -E -ansi"
- configure.args-append --enable-mpi="yes" --enable-mpi-io="yes"
- configure.args-append MPI_RUNNER=${prefix}/bin/mpiexec-mpich-mp
- test.env-append MPIEXEC=${prefix}/bin/mpiexec-mpich-mp
-}
-
</del><span class="cx"> variant fftw3 description {Build with support for fftw-3 FFT library} {
</span><del>- # FIXME: these need to be installed with some Fortran variant
- depends_lib-append port:fftw-3
- depends_lib-append port:fftw-3-single
</del><ins>+ depends_lib-append port:fftw-3 port:fftw-3-single
+ compilers.enforce_some_fortran fftw-3 fftw-3-single
+
</ins><span class="cx"> if { [variant_isset threads] } {
</span><span class="cx"> configure.args-append --with-fft-flavor="fftw3-threads"
</span><span class="cx"> configure.args-append --with-fft-libs="-lfftw3_threads -lfftw3 -lfftw3f"
</span><span class="lines">@@ -242,7 +150,8 @@
</span><span class="cx"> }
</span><span class="cx"> }
</span><span class="cx">
</span><del>-variant threads description {Build with support for multi-thread support (openMP)} {
</del><ins>+variant threads description {Build with support for OpenMP threads} {
+ # not compatible with g95. What about threaded FFTW3?
</ins><span class="cx"> configure.args-append --enable-openmp
</span><span class="cx"> configure.fcflags-append -fopenmp
</span><span class="cx"> configure.args-append --with-linalg-libs="-L${prefix}/lib -ltatlas"
</span><span class="lines">@@ -251,17 +160,20 @@
</span><span class="cx">
</span><span class="cx"> variant netcdf description {Build with support for NetCDF transferable I/O} {
</span><span class="cx"> depends_lib-append port:netcdf-fortran
</span><ins>+ compilers.enforce_fortran netcdf-fortran
</ins><span class="cx"> configure.args-append --with-netcdf-incs="-I${prefix}/include"
</span><span class="cx"> configure.args-append --with-netcdf-libs="-L${prefix}/lib -lnetcdf -lnetcdff"
</span><span class="cx"> }
</span><span class="cx">
</span><span class="cx"> variant etsf_io requires netcdf description {Build with support for ETSF_IO transferable I/O} {
</span><span class="cx"> depends_lib-append port:etsf_io
</span><ins>+ compilers.enforce_fortran etsf_io
</ins><span class="cx"> configure.args-append --with-etsf-io-incs="-I${prefix}/include/gcc"
</span><span class="cx"> }
</span><span class="cx">
</span><span class="cx"> variant libxc description {Build with support for libXC exchange-correlation library} {
</span><span class="cx"> depends_lib-append port:libxc
</span><ins>+ compilers.enforce_fortran libxc
</ins><span class="cx"> configure.args-append --with-libxc-incs="-I${prefix}/include"
</span><span class="cx"> }
</span><span class="cx">
</span><span class="lines">@@ -281,9 +193,10 @@
</span><span class="cx"> # patchfiles-append patch-fallbacks-sources-bigdft-1.7.0.93-src-Makefile.in.diff
</span><span class="cx"> #}
</span><span class="cx">
</span><del>-variant atompaw description {Build including AtomPAW atomic dataset generator} {
-}
</del><ins>+# FIXME: same problem as for BigDFT, it gets downloaded. Make a separate port.
+#variant atompaw description {Build including AtomPAW atomic dataset generator} {
+#}
</ins><span class="cx">
</span><span class="cx"> livecheck.type regex
</span><del>-livecheck.url ${homepage}/downloads/source-packages/abinit-1/releases/index.html
-livecheck.regex ABINIT (\[0-9.\]+)
</del><ins>+livecheck.url ${homepage}/downloads/abinit-packages
+livecheck.regex ABINIT v (\[0-9.\]+)
</ins></span></pre>
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