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<title>[145120] trunk/dports/science/eo/Portfile</title>
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<dt>Revision</dt> <dd><a href="https://trac.macports.org/changeset/145120">145120</a></dd>
<dt>Author</dt> <dd>dstrubbe@macports.org</dd>
<dt>Date</dt> <dd>2016-01-26 03:14:05 -0800 (Tue, 26 Jan 2016)</dd>
</dl>
<h3>Log Message</h3>
<pre>eo: Use compilers portgroup for C variants. Unfortunately only gcc45 and llvm actually compile and pass tests, after adding a patch and modifying cflags. Fix up description. Remove useless configure.args-delete of args not present. Include default cflags.</pre>
<h3>Modified Paths</h3>
<ul>
<li><a href="#trunkdportsscienceeoPortfile">trunk/dports/science/eo/Portfile</a></li>
</ul>
</div>
<div id="patch">
<h3>Diff</h3>
<a id="trunkdportsscienceeoPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/eo/Portfile (145119 => 145120)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/eo/Portfile 2016-01-26 10:25:23 UTC (rev 145119)
+++ trunk/dports/science/eo/Portfile 2016-01-26 11:14:05 UTC (rev 145120)
</span><span class="lines">@@ -2,6 +2,7 @@
</span><span class="cx"> # $Id$
</span><span class="cx">
</span><span class="cx"> PortSystem 1.0
</span><ins>+PortGroup compilers 1.0
</ins><span class="cx">
</span><span class="cx"> name eo
</span><span class="cx"> categories science
</span><span class="lines">@@ -16,7 +17,7 @@
</span><span class="cx"> ANSI-C++ compliant evolutionary computation \
</span><span class="cx"> library. It contains classes for almost any \
</span><span class="cx"> kind of evolutionary computation you might \
</span><del>- come up to - at least for the ones we could \
</del><ins>+ come up with -- at least for the ones we could \
</ins><span class="cx"> think of. It is component-based, so that if \
</span><span class="cx"> you don't find the class you need in it, it is \
</span><span class="cx"> very easy to subclass existing abstract or \
</span><span class="lines">@@ -37,17 +38,51 @@
</span><span class="cx"> patch-make_checkpoint_assembled.h.diff \
</span><span class="cx"> patch-make_checkpoint_FDC.h.diff \
</span><span class="cx"> patch-make_checkpoint_pareto.h.diff \
</span><del>- patch-make_help.cpp.diff
</del><ins>+ patch-make_help.cpp.diff \
+ patch-test-t-eoSelect.cpp.diff
+# last is required for 'port test' with a GCC compiler.
</ins><span class="cx">
</span><span class="cx"> configure.args-append --disable-applications --disable-gnuplot --disable-tutorial
</span><del>-configure.args-delete --enable-applications --enable-gnuplot --enable-tutorial
</del><span class="cx">
</span><span class="cx"> test.run yes
</span><span class="cx"> test.target check
</span><span class="cx">
</span><ins>+compilers.choose cc cxx
</ins><span class="cx"> # TODO: Fix this project's buggy C++ code or file a bug upstream
</span><ins>+compilers.setup -clang -dragonegg -gcc gcc45
</ins><span class="cx"> compiler.blacklist *clang*
</span><span class="cx">
</span><ins>+# clang++ gives: "error: use of undeclared identifier 'value'"
+
+# gcc5:
+#../../src/utils/eoStat.h:382:34: error: type 'eoDistanceStat<EOT>' is not a base type for type 'eoDistanceStat<EOT>'
+# using eoDistanceStat< EOT >::value;
+
+# gcc46, gcc47, dragonegg33, dragonegg34:
+# eoFunctorStore.cpp: In destructor 'virtual eoFunctorStore::~eoFunctorStore()':
+# eoFunctorStore.cpp:13:9: error: 'size_t' was not declared in this scope
+# eoFunctorStore.cpp:13:9: note: suggested alternatives:
+# In file included from /opt/local/include/gcc47/c++/bits/stl_algobase.h:60:0,
+# from /opt/local/include/gcc47/c++/vector:61,
+# from ./eoFunctorStore.h:30,
+# from eoFunctorStore.cpp:6:
+# /opt/local/include/gcc47/c++//x86_64-apple-darwin14/bits/c++config.h:173:26: note: 'std::size_t'
+# /opt/local/include/gcc47/c++//x86_64-apple-darwin14/bits/c++config.h:173:26: note: 'std::size_t'
+# eoFunctorStore.cpp:13:16: error: expected ';' before 'i'
+# eoFunctorStore.cpp:13:23: error: 'i' was not declared in this scope
+
+# caused by gcc use of -ftree-vectorize -march=native -O3
+# if /opt/local/bin/g++-mp-4.4 -DHAVE_CONFIG_H -I. -I. -I../.. -I/opt/local/include -I../../src -pipe -Os -fpermissive -ftree-vectorize -march=native -O3 -MT make_genotype_real.o -MD -MP -MF ".deps/make_genotype_real.Tpo" -c -o make_genotype_real.o make_genotype_real.cpp; \
+# then mv -f ".deps/make_genotype_real.Tpo" ".deps/make_genotype_real.Po"; else rm -f ".deps/make_genotype_real.Tpo"; exit 1; fi
+# {standard input}:807:no such instruction: `vmovsd (%r9), %xmm1'
+# {standard input}:808:no such instruction: `vmovd %rbx, %xmm0'
+# {standard input}:809:no such instruction: `vucomisd %xmm0, %xmm1'
+# {standard input}:810:no such instruction: `vcmpnltsd %xmm1, %xmm0,%xmm2'
+# {standard input}:813:no such instruction: `vandpd %xmm2, %xmm0,%xmm0'
+# {standard input}:814:no such instruction: `vandnpd %xmm1, %xmm2,%xmm1'
+
+# gcc44 test: FAIL: t-eoRandom
+
</ins><span class="cx"> #platform darwin {
</span><span class="cx"> # if {${os.major} >= 13} {
</span><span class="cx"> # depends_lib
</span><span class="lines">@@ -78,34 +113,15 @@
</span><span class="cx"> configure.args-delete --disable-tutorial
</span><span class="cx"> }
</span><span class="cx">
</span><del>-variant gcc43 conflicts gcc44 gcc45 gcc46 gcc47 description "Use GCC 4.3 for compilation of EO - optimized for host machine" {
- configure.compiler macports-gcc-4.3
- configure.cflags-append "-ftree-vectorize -march=native -O3"
- configure.cxxflags-append "-ftree-vectorize -march=native -O3"
</del><ins>+pre-configure {
+ configure.args-append CC=${configure.cc} CFLAGS="${configure.cflags}" \
+ CXX=${configure.cxx}
+
+ if {[gcc_variant_isset]} {
+ configure.cxxflags-append "-fpermissive"
+# configure.cflags-append "-ftree-vectorize -march=native -O3"
+# configure.cxxflags-append "-ftree-vectorize -march=native -O3"
+ }
</ins><span class="cx"> }
</span><span class="cx">
</span><del>-variant gcc44 conflicts gcc43 gcc45 gcc46 gcc47 description "Use GCC 4.4 for compilation of EO - optimized for host machine" {
- configure.compiler macports-gcc-4.4
- configure.cflags-append "-ftree-vectorize -march=native -O3"
- configure.cxxflags-append "-ftree-vectorize -march=native -O3"
-}
-
-variant gcc45 conflicts gcc43 gcc44 gcc46 gcc47 description "Use GCC 4.5 for compilation of EO - optimized for host machine" {
- configure.compiler macports-gcc-4.5
- configure.cflags-append "-ftree-vectorize -march=native -O3"
- configure.cxxflags-append "-ftree-vectorize -march=native -O3"
-}
-
-variant gcc46 conflicts gcc43 gcc44 gcc45 gcc47 description "Use GCC 4.6 for compilation of EO - optimized for host machine" {
- configure.compiler macports-gcc-4.6
- configure.cflags-append "-ftree-vectorize -march=native -O3"
- configure.cxxflags-append "-ftree-vectorize -march=native -O3"
-}
-
-variant gcc47 conflicts gcc43 gcc44 gcc45 gcc46 description "Use GCC 4.7 for compilation of EO - optimized for host machine" {
- configure.compiler macports-gcc-4.7
- configure.cflags-append "-ftree-vectorize -march=native -O3"
- configure.cxxflags-append "-ftree-vectorize -march=native -O3"
-}
-
</del><span class="cx"> livecheck.distname eo
</span></span></pre>
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