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<title>[145879] trunk/dports/science/abinit/Portfile</title>
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<dt>Revision</dt> <dd><a href="https://trac.macports.org/changeset/145879">145879</a></dd>
<dt>Author</dt> <dd>dstrubbe@macports.org</dd>
<dt>Date</dt> <dd>2016-02-19 10:20:34 -0800 (Fri, 19 Feb 2016)</dd>
</dl>
<h3>Log Message</h3>
<pre>abinit: Add variants to choose linear algebra library, including scalapack. Comment out bigdft/atompaw stuff. Enable more tests. Fix test phase to actually use mpirun.</pre>
<h3>Modified Paths</h3>
<ul>
<li><a href="#trunkdportsscienceabinitPortfile">trunk/dports/science/abinit/Portfile</a></li>
</ul>
</div>
<div id="patch">
<h3>Diff</h3>
<a id="trunkdportsscienceabinitPortfile"></a>
<div class="modfile"><h4>Modified: trunk/dports/science/abinit/Portfile (145878 => 145879)</h4>
<pre class="diff"><span>
<span class="info">--- trunk/dports/science/abinit/Portfile 2016-02-19 18:19:50 UTC (rev 145878)
+++ trunk/dports/science/abinit/Portfile 2016-02-19 18:20:34 UTC (rev 145879)
</span><span class="lines">@@ -42,7 +42,7 @@
</span><span class="cx"> # g95 is not compatible with OpenMP, and support will be removed in the next version
</span><span class="cx"> mpi.setup default require_fortran -g95
</span><span class="cx">
</span><del>-configure.args-append --with-linalg-flavor="atlas" --enable-gw-dpc
</del><ins>+configure.args-append --enable-gw-dpc
</ins><span class="cx"> configure.optflags -O3
</span><span class="cx">
</span><span class="cx"> use_parallel_build yes
</span><span class="lines">@@ -53,7 +53,6 @@
</span><span class="cx"> #build.target multi multi_nprocs=4
</span><span class="cx">
</span><span class="cx"> default_variants +etsf_io +libxc
</span><del>-# Do not put +wannier90 since tests fail for wannier90 use.
</del><span class="cx">
</span><span class="cx"> pre-configure {
</span><span class="cx"> if {[fortran_variant_name] eq "g95"} {
</span><span class="lines">@@ -94,21 +93,44 @@
</span><span class="cx"> # set dft-flavor ${dft-flavor}+wannier90
</span><span class="cx"> # }
</span><span class="cx"> # }
</span><del>- if { [variant_isset bigdft] } {
- if { ${dft-flavor} eq "none" } {
- set dft-flavor bigdft
</del><ins>+# if { [variant_isset bigdft] } {
+# if { ${dft-flavor} eq "none" } {
+# set dft-flavor bigdft
+# } else {
+# set dft-flavor ${dft-flavor}+bigdft
+# }
+# }
+# if { [variant_isset atompaw] } {
+# if { ${dft-flavor} eq "none" } {
+# set dft-flavor atompaw
+# } else {
+# set dft-flavor ${dft-flavor}+atompaw
+# }
+# }
+ configure.args-append --with-dft-flavor="${dft-flavor}"
+
+ set linalg-flavor "none"
+ if { [variant_isset atlas] } {
+ set linalg-flavor atlas
+ if {[variant_isset threads]} {
+ set linalg_libs -ltatlas
</ins><span class="cx"> } else {
</span><del>- set dft-flavor ${dft-flavor}+bigdft
</del><ins>+ set linalg_libs -lsatlas
</ins><span class="cx"> }
</span><del>- }
- if { [variant_isset atompaw] } {
- if { ${dft-flavor} eq "none" } {
- set dft-flavor atompaw
- } else {
- set dft-flavor ${dft-flavor}+atompaw
</del><ins>+ } else {
+ set linalg-flavor netlib
+ if { [variant_isset accelerate] } {
+ set linalg_libs -lveclibfort
+ } elseif { [variant_isset openblas] } {
+ set linalg_libs -lopenblas
</ins><span class="cx"> }
</span><span class="cx"> }
</span><del>- configure.args-append --with-dft-flavor="${dft-flavor}"
</del><ins>+ if { [variant_isset scalapack] } {
+ set linalg-flavor ${linalg-flavor}+scalapack
+ set linalg_libs "${linalg_libs} -lscalapack"
+ }
+ configure.args-append --with-linalg-flavor="${linalg-flavor}"
+ configure.args-append --with-linalg-libs="${linalg_libs}"
</ins><span class="cx"> }
</span><span class="cx">
</span><span class="cx"> # install binaries and pkgconfig but the very large number of test files
</span><span class="lines">@@ -119,14 +141,32 @@
</span><span class="cx">
</span><span class="cx"> test.run yes
</span><span class="cx"> test.cmd tests/runtests.py
</span><del>-test.target built-in fast
</del><ins>+# args -t0 for no timeout since it cannot be found anyway; or: set depends_build-append port:timeout
+test.target built-in fast tutorespfn tutorial unitary
+#test.target built-in fast tutorespfn tutorial unitary v1 v2 v3 v4 v5 v6 v67mbpt v7
</ins><span class="cx"> # wannier90 test will probably fail, version 2.0.x is not supported anyway
</span><span class="cx">
</span><ins>+# for +scalapack +atlas -libxc:
+# hang in test [v2][t79].
+# :info:test [tutorial][tspin_6][np=1]: failed: absolute error 2.7e-08 > 2.5e-08
+
+# other config options to add:
+# --enable-mpi-inplace
+# --with-atompaw-libs; --with-atompaw-incs
+
+pre-test {
+ if {[mpi_variant_isset]} {
+ test.target-append paral mpiio tutoparal
+ reinplace "s|mpirun -np|${mpi.exec} -np|" ${worksrcpath}/tests/pymods/jobrunner.py
+ test.args-append -n 1
+ } else {
+ test.target-append seq
+ }
+}
+
</ins><span class="cx"> pre-configure {
</span><span class="cx"> configure.args-append FCCPP="${configure.cc} -E -ansi"
</span><span class="cx"> if {[mpi_variant_isset]} {
</span><del>- configure.args-append MPI_RUNNER=${mpi.exec}
- test.env-append MPIEXEC=${mpi.exec}
</del><span class="cx"> configure.args-append --enable-mpi="yes" --enable-mpi-io="yes"
</span><span class="cx"> } else {
</span><span class="cx"> configure.args-append --enable-mpi="no"
</span><span class="lines">@@ -149,8 +189,6 @@
</span><span class="cx"> variant threads description {Build with support for OpenMP threads} {
</span><span class="cx"> configure.args-append --enable-openmp
</span><span class="cx"> configure.fcflags-append -fopenmp
</span><del>- configure.args-append --with-linalg-libs="-L${prefix}/lib -ltatlas"
- configure.args-append --with-linalg-incs="-I${prefix}/include"
</del><span class="cx"> }
</span><span class="cx">
</span><span class="cx"> variant netcdf description {Build with support for NetCDF transferable I/O} {
</span><span class="lines">@@ -178,9 +216,42 @@
</span><span class="cx"> test.target-append libxc
</span><span class="cx"> }
</span><span class="cx">
</span><ins>+#3 possibilities for blas/lapack + ScaLapack
+#-------------------------------------------
+if {![variant_isset accelerate] && ![variant_isset atlas] && ![variant_isset openblas]} {
+ default_variants-append +accelerate
+}
+
+variant accelerate conflicts atlas openblas description {Build with linear algebra from built-in Accelerate framework} {
+ depends_lib-append port:veclibfort
+}
+
+variant atlas conflicts accelerate openblas description {Build with linear algebra from ATLAS} {
+ depends_lib-append port:atlas
+}
+
+variant openblas conflicts accelerate atlas description {Build with linear algebra from OpenBLAS} {
+ # allow OpenBLAS-devel too
+ depends_lib-append path:lib/libopenblas.dylib:OpenBLAS
+ require_active_variants path:lib/libopenblas.dylib:OpenBLAS lapack
+}
+
+variant scalapack description {Build with ScaLAPACK for parallel linear algebra} {
+ depends_lib-append port:scalapack
+
+ if {![mpi_variant_isset]} {
+ ui_error "+scalapack requires an MPI variant. Choose +mpich, +mpich_devel, +openmpi, or +openmpi_devel."
+ return -code error "+scalapack requires an MPI variant."
+ }
+
+ mpi.setup require
+ mpi.enforce_variant scalapack
+}
+
</ins><span class="cx"> # abinit does not work with Wannier90 version 2.0.x currently
</span><span class="cx"> #variant wannier90 description {Build with support for Wannier90} {
</span><span class="cx"> # depends_lib-append port:wannier90
</span><ins>+# test.target-append wannier90 tutoplugs vdwxc
</ins><span class="cx"> #}
</span><span class="cx">
</span><span class="cx"> # FIXME: the code's build system will download BigDFT itself, which is contrary to the
</span></span></pre>
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