[MacPorts] #42454: Fatal error dolfin import

[MacPorts]

#42454: Fatal error dolfin import
------------------------+----------------------
  Reporter:  mwathen@…  |      Owner:  sean@…
      Type:  defect     |     Status:  assigned
  Priority:  Normal     |  Milestone:
 Component:  ports      |    Version:  2.2.1
Resolution:             |   Keywords:
      Port:             |
------------------------+----------------------

Comment (by mwathen@…):

 Replying to [comment:9 sean@…]:
 > Replying to [comment:8 mwathen@…]:
 > > Replying to [comment:7 sean@…]:
 > > > Replying to [comment:6 mwathen@…]:
 > > > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/ufc/_ufc.so:
 > > > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > > > >         /usr/lib/libc++.1.dylib (compatibility version 1.0.0,
 current version 120.0.0)
 > > > >         /usr/lib/libSystem.B.dylib (compatibility version 1.0.0,
 current version 1197.1.1)
 > > >
 > > > Damn, well, what about the output of:
 > > >
 > > > {{{
 > > > $ port contents dolfin | grep so$ | xargs otool -L | grep Python
 > > > }}}
 > >
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_common.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_fem.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_function.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_io.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_la.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 > >
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/dolfin/cpp/_mesh.so:
 > >     /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 >
 > Ok, we might as well just check every port that dolfin is using:
 >
 > {{{
 > $ port echo rdepof:dolfin | xargs port contents | grep -E 'so$|dylib$' |
 xargs otool -L | grep Python
 > }}}

 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/boost/mpi.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/boost/mpi.so (compatibility version 0.0.0, current version
 0.0.0)
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/ffc/time_elements_ext.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/_dummy.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/multiarray.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/operand_flag_tests.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/scalarmath.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/struct_ufunc_test.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/test_rational.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/umath.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/umath_tests.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/fft/fftpack_lite.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/lib/_compiled_base.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/linalg/_umath_linalg.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/linalg/lapack_lite.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/numarray/_capi.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/random/mtrand.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/Scientific/darwin/Scientific_affinitypropagation.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/Scientific/darwin/Scientific_interpolation.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/Scientific/darwin/Scientific_netcdf.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/Scientific/darwin/Scientific_numerics_package_id.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/Scientific/darwin/Scientific_vector.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/libpython2.7.dylib:
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/config/libpython2.7.dylib:
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/ColorPicker.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/MacOS.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/Nav.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/OSATerminology.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_AE.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_AH.so:
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 /lib-dynload/_App.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_CG.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Cm.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Ctl.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Dlg.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Drag.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Evt.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_File.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Fm.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Folder.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Help.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_IBCarbon.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Icn.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Launch.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_List.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Menu.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Mlte.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_OSA.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Qd.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Qdoffs.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Qt.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Res.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Scrap.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_Snd.so:
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 /lib-dynload/_TE.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_bisect.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_bsddb.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_codecs_hk.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_codecs_kr.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_codecs_tw.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_collections.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_csv.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_ctypes_test.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/_curses.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /lib-dynload/autoGIL.so:
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 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/cStringIO.so:
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 /lib-dynload/future_builtins.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /lib-dynload/gestalt.so:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
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 /lib-dynload/nis.so:
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 /site-packages/ufc/_ufc.so:
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)

-- 
Ticket URL: <https://trac.macports.org/ticket/42454#comment:10>
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