[MacPorts] #49430: py27-netcdf4 command execution failed

MacPorts noreply at macports.org
Tue Nov 3 14:33:31 PST 2015


#49430: py27-netcdf4 command execution failed
-------------------------+--------------------
  Reporter:  JDTilley@…  |      Owner:  sean@…
      Type:  defect      |     Status:  new
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:  2.3.4
Resolution:              |   Keywords:
      Port:  py-netcdf4  |
-------------------------+--------------------

Comment (by JDTilley@…):

 Something interesting I noticed in my macports nc-config:


 {{{
 $ nc-config --all

 This netCDF 4.3.3.1 has been built with the following features:

   --cc        -> /usr/bin/clang
   --cflags    ->  -I/opt/local/include -I/opt/local/include -DNDEBUG
   --libs      -> -L/opt/local/lib -lnetcdf

   --has-c++   -> no
   --cxx       ->
   --has-c++4  -> no
   --cxx4      ->

   --fc        -> gfortran
   --fflags    -> -I/usr/local/include
   --flibs     -> -L/usr/local/lib -lnetcdff -L/usr/local/lib -lnetcdf
 -lhdf5 -lhdf5_hl -lhdf5_fortran -lhdf5hl_fortran -L/opt/local/lib -lsz -lz
 -lcurl -lnetcdf -L/usr/local/lib -lnetcdf -lhdf5 -lhdf5_hl -lhdf5_fortran
 -lhdf5hl_fortran -L/opt/local/lib -lsz -lz -lcurl
   --has-f90   -> no

   --has-dap   -> yes
   --has-nc2   -> yes
   --has-nc4   -> yes
   --has-hdf5  -> yes
   --has-hdf4  -> no
   --has-pnetcdf-> no

   --prefix    -> /opt/local
   --includedir-> /opt/local/include
   --version   -> netCDF 4.3.3.1
 }}}

 So even the macports version is finding the netcdf-fortran I manually
 compiled in /usr/local. So I tried to change this by installing the
 macports netcdf-fortran and I get the following message:


 {{{
 Error: org.macports.activate for port netcdf-fortran returned: Image
 error: /opt/local/include/netcdf.inc
 already exists and does not belong to a registered port.  Unable to
 activate port netcdf-fortran. Use
 'port -f activate netcdf-fortran' to force the activation.
 }}}

 Is there anything to make from this?

-- 
Ticket URL: <https://trac.macports.org/ticket/49430#comment:7>
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