[MacPorts] #50793: nco +gcc48 +openmpi does not compile

MacPorts noreply at macports.org
Thu Mar 3 16:11:33 PST 2016


#50793: nco +gcc48 +openmpi does not compile
-----------------------+--------------------------------
 Reporter:  smasson@…  |      Owner:  macports-tickets@…
     Type:  defect     |     Status:  new
 Priority:  Normal     |  Milestone:
Component:  ports      |    Version:  2.3.4
 Keywords:             |       Port:  nco
-----------------------+--------------------------------
 Hi,

 I have the following error when building nco +gcc48 +openmpi:

 {{{
 :info:build In file included from ncoLexer.hpp:10:0,
 :info:build                  from ncoLexer.cpp:2:
 :info:build /opt/local/include/antlr/CharScanner.hpp: In member function
 'bool antlr::CharScannerLiteralsLess::operator()(const string&, const
 string&) const':
 :info:build /opt/local/include/antlr/CharScanner.hpp:565:41: error:
 'strcasecmp' was not declared in this scope
 :info:build    return (strcasecmp(x.c_str(),y.c_str())<0);
 :info:build                                          ^
 }}}

 see the full main.log file:


 {{{
 version:1
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main antlr 2.7.7_1 exists in the ports tree
 :debug:main antlr 2.7.7_1  is the latest installed
 :debug:main antlr 2.7.7_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/antlr
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! antlr 2.7.7_1 >= antlr 2.7.7_1
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main bison 3.0.4_1 exists in the ports tree
 :debug:main bison 3.0.4_1  is the latest installed
 :debug:main bison 3.0.4_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/bison
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! bison 3.0.4_1 >= bison 3.0.4_1
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main gettext 0.19.7_0 exists in the ports tree
 :debug:main gettext 0.19.7_0  is the latest installed
 :debug:main gettext 0.19.7_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/gettext
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang < 211.10.1}
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gettext 0.19.7_0 >= gettext 0.19.7_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main expat 2.1.0_0 exists in the ports tree
 :debug:main expat 2.1.0_0  is the latest installed
 :debug:main expat 2.1.0_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/expat
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libiconv 1.14_0 exists in the ports tree
 :debug:main libiconv 1.14_0  is the latest installed
 :debug:main libiconv 1.14_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/libiconv
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main ncurses 6.0_0 exists in the ports tree
 :debug:main ncurses 6.0_0  is the latest installed
 :debug:main ncurses 6.0_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ncurses
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! ncurses 6.0_0 >= ncurses 6.0_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main m4 1.4.17_0 exists in the ports tree
 :debug:main m4 1.4.17_0  is the latest installed
 :debug:main m4 1.4.17_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/m4
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! m4 1.4.17_0 >= m4 1.4.17_0
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main bison-runtime 3.0.4_0 exists in the ports tree
 :debug:main bison-runtime 3.0.4_0  is the latest installed
 :debug:main bison-runtime 3.0.4_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/bison
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main only one arch supported, so not adding the default universal
 variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! bison-runtime 3.0.4_0 >= bison-runtime
 3.0.4_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main texinfo 6.1_0 exists in the ports tree
 :debug:main texinfo 6.1_0  is the latest installed
 :debug:main texinfo 6.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/texinfo
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! texinfo 6.1_0 >= texinfo 6.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main perl5.22 5.22.1_1 exists in the ports tree
 :debug:main perl5.22 5.22.1_1  is the latest installed
 :debug:main perl5.22 5.22.1_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/perl5
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Re-registering default for configure.universal_args
 :debug:main Sourcing PortGroup perl5 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/perl5-1.0.tcl
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! perl5.22 5.22.1_1 >= perl5.22 5.22.1_1
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main gdbm 1.11_1 exists in the ports tree
 :debug:main gdbm 1.11_1  is the latest installed
 :debug:main gdbm 1.11_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/databases/gdbm
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gdbm 1.11_1 >= gdbm 1.11_1
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main gcc48 4.8.5_0 exists in the ports tree
 :debug:main gcc48 4.8.5_0  is the latest installed
 :debug:main gcc48 4.8.5_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/gcc48
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed
 or it doesn't work
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gcc48 4.8.5_0 >= gcc48 4.8.5_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main cctools 877.5_2 exists in the ports tree
 :debug:main cctools 877.5_2 +llvm33 is the latest installed
 :debug:main cctools 877.5_2 +llvm33 is active
 :debug:main Merging existing variants '+llvm33' into variants
 :debug:main new fully merged portvariants: llvm33 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/cctools
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant llvm33 provides llvm33
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! cctools 877.5_2 >= cctools 877.5_2
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main llvm-3.3 3.3_8 exists in the ports tree
 :debug:main llvm-3.3 3.3_8  is the latest installed
 :debug:main llvm-3.3 3.3_8  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/llvm-3.3
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! llvm-3.3 3.3_8 >= llvm-3.3 3.3_8
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libffi 3.2.1_0 exists in the ports tree
 :debug:main libffi 3.2.1_0  is the latest installed
 :debug:main libffi 3.2.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libffi
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main perl5 5.22.1_1 exists in the ports tree
 :debug:main perl5 5.22.1_1 +perl5_22 is the latest installed
 :debug:main perl5 5.22.1_1 +perl5_22 is active
 :debug:main Merging existing variants '+perl5_22' into variants
 :debug:main new fully merged portvariants: perl5_22 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/perl5
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Re-registering default for configure.universal_args
 :debug:main Sourcing PortGroup perl5 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/perl5-1.0.tcl
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Executing variant perl5_22 provides perl5_22
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! perl5 5.22.1_1 >= perl5 5.22.1_1
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main llvm_select 1.0_0 exists in the ports tree
 :debug:main llvm_select 1.0_0  is the latest installed
 :debug:main llvm_select 1.0_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/sysutils/llvm_select
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! llvm_select 1.0_0 >= llvm_select 1.0_0
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main cloog 0.18.3_0 exists in the ports tree
 :debug:main cloog 0.18.3_0  is the latest installed
 :debug:main cloog 0.18.3_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/cloog
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! cloog 0.18.3_0 >= cloog 0.18.3_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main gmp 6.1.0_1 exists in the ports tree
 :debug:main gmp 6.1.0_1  is the latest installed
 :debug:main gmp 6.1.0_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/gmp
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gmp 6.1.0_1 >= gmp 6.1.0_1
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main isl 0.14.1_0 exists in the ports tree
 :debug:main isl 0.14.1_0  is the latest installed
 :debug:main isl 0.14.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/isl
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! isl 0.14.1_0 >= isl 0.14.1_0
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main ld64 2_0 exists in the ports tree
 :debug:main ld64 2_0  is the latest installed
 :debug:main ld64 2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ld64
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! ld64 2_0 >= ld64 2_0
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main ld64-latest 253.3_0 exists in the ports tree
 :debug:main ld64-latest 253.3_0 +llvm33 is the latest installed
 :debug:main ld64-latest 253.3_0 +llvm33 is active
 :debug:main Merging existing variants '+llvm33' into variants
 :debug:main new fully merged portvariants: llvm33 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ld64
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang < 300}
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant llvm33 provides llvm33
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! ld64-latest 253.3_0 >= ld64-latest 253.3_0
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main libcxx 3.7.1_0 exists in the ports tree
 :debug:main libcxx 3.7.1_0  is the latest installed
 :debug:main libcxx 3.7.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/libcxx
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libcxx 3.7.1_0 >= libcxx 3.7.1_0
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main libgcc 5.3.0_0 exists in the ports tree
 :debug:main libgcc 5.3.0_0  is the latest installed
 :debug:main libgcc 5.3.0_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/gcc5
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed
 or it doesn't work
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang < 300}
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libgcc 5.3.0_0 >= libgcc 5.3.0_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libmpc 1.0.3_0 exists in the ports tree
 :debug:main libmpc 1.0.3_0  is the latest installed
 :debug:main libmpc 1.0.3_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libmpc
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libmpc 1.0.3_0 >= libmpc 1.0.3_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main mpfr 3.1.3_0 exists in the ports tree
 :debug:main mpfr 3.1.3_0  is the latest installed
 :debug:main mpfr 3.1.3_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/mpfr
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang == 211.10.1}
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! mpfr 3.1.3_0 >= mpfr 3.1.3_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main gcc_select 0.1_8 exists in the ports tree
 :debug:main gcc_select 0.1_8  is the latest installed
 :debug:main gcc_select 0.1_8  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/sysutils/gcc_select
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main curl 7.47.1_1 exists in the ports tree
 :debug:main curl 7.47.1_1 +ssl is the latest installed
 :debug:main curl 7.47.1_1 +ssl is active
 :debug:main Merging existing variants '+ssl' into variants
 :debug:main new fully merged portvariants: ssl +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/net/curl
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant ssl provides ssl
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! curl 7.47.1_1 >= curl 7.47.1_1
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main zlib 1.2.8_0 exists in the ports tree
 :debug:main zlib 1.2.8_0  is the latest installed
 :debug:main zlib 1.2.8_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/zlib
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup xcodeversion 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main openssl 1.0.2g_0 exists in the ports tree
 :debug:main openssl 1.0.2g_0  is the latest installed
 :debug:main openssl 1.0.2g_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/openssl
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! openssl 1.0.2g_0 >= openssl 1.0.2g_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main curl-ca-bundle 7.47.1_0 exists in the ports tree
 :debug:main curl-ca-bundle 7.47.1_0  is the latest installed
 :debug:main curl-ca-bundle 7.47.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/net/curl
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! curl-ca-bundle 7.47.1_0 >= curl-ca-bundle
 7.47.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libxml2 2.9.2_2 exists in the ports tree
 :debug:main libxml2 2.9.2_2  is the latest installed
 :debug:main libxml2 2.9.2_2  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/libxml2
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libxml2 2.9.2_2 >= libxml2 2.9.2_2
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main xz 5.2.2_0 exists in the ports tree
 :debug:main xz 5.2.2_0  is the latest installed
 :debug:main xz 5.2.2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/xz
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! xz 5.2.2_0 >= xz 5.2.2_0
 :debug:main epoch: in tree: 2 installed: 2
 :debug:main netcdf 4.3.3.1_4 exists in the ports tree
 :debug:main netcdf 4.3.3.1_4 +dap+gcc48+netcdf4+openmpi is the latest
 installed
 :debug:main netcdf 4.3.3.1_4 +dap+gcc48+netcdf4+openmpi is active
 :debug:main Merging existing variants '+dap+gcc48+netcdf4+openmpi' into
 variants
 :debug:main new fully merged portvariants: openmpi + netcdf4 + gcc48 + dap
 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/netcdf
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup active_variants 1.1 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/active_variants-1.1.tcl
 :debug:main Sourcing PortGroup compilers 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compilers-1.0.tcl
 :debug:main Sourcing PortGroup mpi 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/mpi-1.0.tcl
 :debug:main Sourcing PortGroup github 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/github-1.0.tcl
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Executing variant gcc48 provides gcc48
 :debug:main Executing variant openmpi provides openmpi
 :debug:main Executing variant netcdf4 provides netcdf4
 :debug:main Executing variant dap provides dap
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! netcdf 4.3.3.1_4 >= netcdf 4.3.3.1_4
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main openmpi-gcc48 1.10.2_0 exists in the ports tree
 :debug:main openmpi-gcc48 1.10.2_0 +fortran is the latest installed
 :debug:main openmpi-gcc48 1.10.2_0 +fortran is active
 :debug:main Merging existing variants '+fortran' into variants
 :debug:main new fully merged portvariants: fortran +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/openmpi
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main Sourcing PortGroup active_variants 1.1 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/active_variants-1.1.tcl
 :debug:main Sourcing PortGroup compilers 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compilers-1.0.tcl
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Executing variant fortran provides fortran
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Chosen compiler macports-gcc-4.8 is provided by a port, adding
 dependency
 :debug:main Adding depends_lib port:gcc48
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! openmpi-gcc48 1.10.2_0 >= openmpi-gcc48
 1.10.2_0
 :debug:main epoch: in tree: 1 installed: 1
 :debug:main hwloc 1.11.2_0 exists in the ports tree
 :debug:main hwloc 1.11.2_0  is the latest installed
 :debug:main hwloc 1.11.2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/hwloc
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! hwloc 1.11.2_0 >= hwloc 1.11.2_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main mpi_select 0.0_3 exists in the ports tree
 :debug:main mpi_select 0.0_3  is the latest installed
 :debug:main mpi_select 0.0_3  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/sysutils/mpi_select
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup select 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! mpi_select 0.0_3 >= mpi_select 0.0_3
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main mpi-doc 3.2_0 exists in the ports tree
 :debug:main mpi-doc 3.2_0  is the latest installed
 :debug:main mpi-doc 3.2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science
 /mpi-doc
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main universal_variant is false, so not adding the default
 universal variant
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! mpi-doc 3.2_0 >= mpi-doc 3.2_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main hdf5 1.8.16_2 exists in the ports tree
 :debug:main hdf5 1.8.16_2 +cxx+fortran+gcc48+hl+openmpi+szip is the latest
 installed
 :debug:main hdf5 1.8.16_2 +cxx+fortran+gcc48+hl+openmpi+szip is active
 :debug:main Merging existing variants '+cxx+fortran+gcc48+hl+openmpi+szip'
 into variants
 :debug:main new fully merged portvariants: openmpi + hl + fortran + gcc48
 + szip + cxx +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/hdf5
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup conflicts_build 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/conflicts_build-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main Sourcing PortGroup active_variants 1.1 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/active_variants-1.1.tcl
 :debug:main Sourcing PortGroup compilers 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compilers-1.0.tcl
 :debug:main Sourcing PortGroup mpi 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/mpi-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant gcc48 provides gcc48
 :debug:main Executing variant openmpi provides openmpi
 :debug:main Executing variant szip provides szip
 :debug:main Executing variant hl provides hl
 :debug:main Executing variant cxx provides cxx
 :debug:main Executing variant fortran provides fortran
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! hdf5 1.8.16_2 >= hdf5 1.8.16_2
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main szip 2.1_4 exists in the ports tree
 :debug:main szip 2.1_4  is the latest installed
 :debug:main szip 2.1_4  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/szip
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! szip 2.1_4 >= szip 2.1_4
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main netcdf-fortran 4.4.2_0 exists in the ports tree
 :debug:main netcdf-fortran 4.4.2_0 +gcc48+openmpi is the latest installed
 :debug:main netcdf-fortran 4.4.2_0 +gcc48+openmpi is active
 :debug:main Merging existing variants '+gcc48+openmpi' into variants
 :debug:main new fully merged portvariants: openmpi + gcc48 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science
 /netcdf-fortran
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main Sourcing PortGroup active_variants 1.1 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/active_variants-1.1.tcl
 :debug:main Sourcing PortGroup compilers 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compilers-1.0.tcl
 :debug:main Sourcing PortGroup mpi 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/mpi-1.0.tcl
 :debug:main Sourcing PortGroup github 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/github-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant gcc48 provides gcc48
 :debug:main Executing variant openmpi provides openmpi
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! netcdf-fortran 4.4.2_0 >= netcdf-fortran
 4.4.2_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main udunits2 2.2.20_0 exists in the ports tree
 :debug:main udunits2 2.2.20_0  is the latest installed
 :debug:main udunits2 2.2.20_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/udunits2
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! udunits2 2.2.20_0 >= udunits2 2.2.20_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main gsl 2.1_0 exists in the ports tree
 :debug:main gsl 2.1_0 +gcc48+optimize is the latest installed
 :debug:main gsl 2.1_0 +gcc48+optimize is active
 :debug:main Merging existing variants '+gcc48+optimize' into variants
 :debug:main new fully merged portvariants: optimize + gcc48 +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/math/gsl
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup active_variants 1.1 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/active_variants-1.1.tcl
 :debug:main Sourcing PortGroup compilers 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compilers-1.0.tcl
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Executing variant gcc48 provides gcc48
 :debug:main Executing variant optimize provides optimize
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gsl 2.1_0 >= gsl 2.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main xercesc3 3.1.3_0 exists in the ports tree
 :debug:main xercesc3 3.1.3_0  is the latest installed
 :debug:main xercesc3 3.1.3_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/xercesc3
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! xercesc3 3.1.3_0 >= xercesc3 3.1.3_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main icu 55.1_0 exists in the ports tree
 :debug:main icu 55.1_0  is the latest installed
 :debug:main icu 55.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/icu
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! icu 55.1_0 >= icu 55.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main vecLibFort 0.4.2_0 exists in the ports tree
 :debug:main vecLibFort 0.4.2_0  is the latest installed
 :debug:main vecLibFort 0.4.2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/vecLibFort
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup github 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/github-1.0.tcl
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! vecLibFort 0.4.2_0 >= vecLibFort 0.4.2_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main wget 1.17.1_0 exists in the ports tree
 :debug:main wget 1.17.1_0 +ssl is the latest installed
 :debug:main wget 1.17.1_0 +ssl is active
 :debug:main Merging existing variants '+ssl' into variants
 :debug:main new fully merged portvariants: ssl +
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/net/wget
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Executing variant ssl provides ssl
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! wget 1.17.1_0 >= wget 1.17.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libidn 1.32_0 exists in the ports tree
 :debug:main libidn 1.32_0  is the latest installed
 :debug:main libidn 1.32_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/mail/libidn
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libidn 1.32_0 >= libidn 1.32_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main nettle 3.1.1_0 exists in the ports tree
 :debug:main nettle 3.1.1_0  is the latest installed
 :debug:main nettle 3.1.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/nettle
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! nettle 3.1.1_0 >= nettle 3.1.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main pcre 8.38_0 exists in the ports tree
 :debug:main pcre 8.38_0  is the latest installed
 :debug:main pcre 8.38_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/pcre
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! pcre 8.38_0 >= pcre 8.38_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main bzip2 1.0.6_0 exists in the ports tree
 :debug:main bzip2 1.0.6_0  is the latest installed
 :debug:main bzip2 1.0.6_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/bzip2
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
 :debug:main epoch: in tree: 20090923 installed: 20090923
 :debug:main libedit 20150325-3.1_0 exists in the ports tree
 :debug:main libedit 20150325-3.1_0  is the latest installed
 :debug:main libedit 20150325-3.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libedit
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libedit 20150325-3.1_0 >= libedit
 20150325-3.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main gnutls 3.3.21_0 exists in the ports tree
 :debug:main gnutls 3.3.21_0  is the latest installed
 :debug:main gnutls 3.3.21_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/gnutls
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Sourcing PortGroup muniversal 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl
 :debug:main universal variant already exists, so not adding the default
 one
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! gnutls 3.3.21_0 >= gnutls 3.3.21_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libtasn1 4.7_0 exists in the ports tree
 :debug:main libtasn1 4.7_0  is the latest installed
 :debug:main libtasn1 4.7_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libtasn1
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libtasn1 4.7_0 >= libtasn1 4.7_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main p11-kit 0.22.1_0 exists in the ports tree
 :debug:main p11-kit 0.22.1_0  is the latest installed
 :debug:main p11-kit 0.22.1_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/security/p11-kit
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! p11-kit 0.22.1_0 >= p11-kit 0.22.1_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main desktop-file-utils 0.22_0 exists in the ports tree
 :debug:main desktop-file-utils 0.22_0  is the latest installed
 :debug:main desktop-file-utils 0.22_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/gnome
 /desktop-file-utils
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! desktop-file-utils 0.22_0 >= desktop-file-
 utils 0.22_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main glib2 2.46.2_0 exists in the ports tree
 :debug:main glib2 2.46.2_0  is the latest installed
 :debug:main glib2 2.46.2_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/glib2
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang < 600}
 :debug:main compiler clang 600.0.57 not blacklisted because it doesn't
 match {clang < 318}
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! glib2 2.46.2_0 >= glib2 2.46.2_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main popt 1.16_0 exists in the ports tree
 :debug:main popt 1.16_0  is the latest installed
 :debug:main popt 1.16_0  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/popt
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! popt 1.16_0 >= popt 1.16_0
 :debug:main epoch: in tree: 0 installed: 0
 :debug:main libxslt 1.1.28_1 exists in the ports tree
 :debug:main libxslt 1.1.28_1  is the latest installed
 :debug:main libxslt 1.1.28_1  is active
 :debug:main Merging existing variants '' into variants
 :debug:main new fully merged portvariants:
 :debug:main Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/libxslt
 :debug:main OS darwin/13.4.0 (Mac OS X 10.9) arch i386
 :debug:main adding the default universal variant
 :debug:main Reading variant descriptions from
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
 :debug:main Running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Finished running callback
 portconfigure::add_automatic_compiler_dependencies
 :debug:main Running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main Finished running callback
 portbuild::add_automatic_buildsystem_dependencies
 :debug:main No need to upgrade! libxslt 1.1.28_1 >= libxslt 1.1.28_1
 :msg:main --->  Computing dependencies for nco:info:main .:debug:main nco
 has no conflicts
 :debug:main Searching for dependency: antlr
 :debug:main Found Dependency: receipt exists for antlr
 :debug:main Searching for dependency: bison
 :debug:main Found Dependency: receipt exists for bison
 :debug:main Searching for dependency: m4
 :debug:main Found Dependency: receipt exists for m4
 :debug:main Searching for dependency: texinfo
 :debug:main Found Dependency: receipt exists for texinfo
 :debug:main Searching for dependency: gcc48
 :debug:main Found Dependency: receipt exists for gcc48
 :debug:main Searching for dependency: curl
 :debug:main Found Dependency: receipt exists for curl
 :debug:main Searching for dependency: gettext
 :debug:main Found Dependency: receipt exists for gettext
 :debug:main Searching for dependency: libiconv
 :debug:main Found Dependency: receipt exists for libiconv
 :debug:main Searching for dependency: libxml2
 :debug:main Found Dependency: receipt exists for libxml2
 :debug:main Searching for dependency: netcdf
 :debug:main Found Dependency: receipt exists for netcdf
 :debug:main Searching for dependency: netcdf-fortran
 :debug:main Found Dependency: receipt exists for netcdf-fortran
 :debug:main Searching for dependency: openssl
 :debug:main Found Dependency: receipt exists for openssl
 :debug:main Searching for dependency: udunits2
 :debug:main Found Dependency: receipt exists for udunits2
 :debug:main Searching for dependency: zlib
 :debug:main Found Dependency: receipt exists for zlib
 :debug:main Searching for dependency: gsl
 :debug:main Found Dependency: receipt exists for gsl
 :debug:main Searching for dependency: hdf5
 :debug:main Found Dependency: receipt exists for hdf5
 :debug:main Searching for dependency: xercesc3
 :debug:main Found Dependency: receipt exists for xercesc3
 :debug:main Searching for dependency: libgcc
 :debug:main Found Dependency: receipt exists for libgcc
 :debug:main Searching for dependency: vecLibFort
 :debug:main Found Dependency: receipt exists for vecLibFort
 :debug:main Searching for dependency: wget
 :debug:main Found Dependency: receipt exists for wget
 :msg:main
 :debug:main Executing org.macports.main (nco)
 :debug:main changing euid/egid - current euid: 0 - current egid: 0
 :debug:main egid changed to: 501
 :debug:main euid changed to: 503
 :debug:main Skipping completed org.macports.archivefetch (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.fetch (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.checksum (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.extract (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.patch (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.configure (nco)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:build build phase started at Thu Mar  3 15:19:03 PST 2016
 :notice:build --->  Building nco
 :debug:build Executing org.macports.build (nco)
 :debug:build Environment:
 CC_PRINT_OPTIONS='YES'
 CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/.CC_PRINT_OPTIONS'
 CPATH='/opt/local/include'
 LIBRARY_PATH='/opt/local/lib'
 MACOSX_DEPLOYMENT_TARGET='10.9'
 :debug:build Assembled command: 'cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5"
 && /usr/bin/make -j4 -w all'
 :debug:build Executing command line:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5"
 && /usr/bin/make -j4 -w all
 :info:build make: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-
 recursive
 :info:build make[1]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5'
 :info:build Making all in data
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/data'
 :info:build ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc
 :info:build make[2]: ncks: No such file or directory
 :info:build make[2]: [in_4c.nc] Error 1 (ignored)
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/data'
 :info:build Making all in src
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src'
 :info:build Making all in nco
 :info:build make[3]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco'
 :info:build make[3]: Nothing to be done for `all'.
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco'
 :info:build Making all in nco_c++
 :info:build make[3]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco_c++'
 :info:build make[3]: Nothing to be done for `all'.
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco_c++'
 :info:build Making all in nco++
 :info:build make[3]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco++'
 :info:build /opt/local/bin/g++-mp-4.8 -DHAVE_CONFIG_H -I. -I../..  -I./
 -I../nco -I/opt/local/include -I/opt/local/include -DNDEBUG
 -I/opt/local/include -I/usr/include/malloc -I/opt/local/include/udunits2
 -I/opt/local/include -DENABLE_NETCDF4 -I/opt/local/include
 -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2
 -pipe -Os -c -o ncoLexer.o ncoLexer.cpp
 :info:build In file included from ncoLexer.hpp:10:0,
 :info:build                  from ncoLexer.cpp:2:
 :info:build /opt/local/include/antlr/CharScanner.hpp: In member function
 'bool antlr::CharScannerLiteralsLess::operator()(const string&, const
 string&) const':
 :info:build /opt/local/include/antlr/CharScanner.hpp:565:41: error:
 'strcasecmp' was not declared in this scope
 :info:build    return (strcasecmp(x.c_str(),y.c_str())<0);
 :info:build                                          ^
 :info:build make[3]: *** [ncoLexer.o] Error 1
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src/nco++'
 :info:build make[2]: *** [all-recursive] Error 1
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5/src'
 :info:build make[1]: *** [all-recursive] Error 1
 :info:build make[1]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5'
 :info:build make: *** [all] Error 2
 :info:build make: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5'
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/work/nco-4.5.5"
 && /usr/bin/make -j4 -w all
 :info:build Exit code: 2
 :error:build org.macports.build for port nco returned: command execution
 failed
 :debug:build Error code: CHILDSTATUS 46254 2
 :debug:build Backtrace: command execution failed
     while executing
 "system -nice 0 $fullcmdstring"
     ("eval" body line 1)
     invoked from within
 "eval system $notty $nice \$fullcmdstring"
     invoked from within
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "portbuild::build_main org.macports.build"
     ("eval" body line 1)
     invoked from within
 "eval $procedure $targetname"
 :info:build Warning: targets not executed for nco: org.macports.activate
 org.macports.build org.macports.destroot org.macports.install
 :notice:build Please see the log file for port nco for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_nco/nco/main.log

 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/50793>
MacPorts <https://www.macports.org/>
Ports system for OS X


More information about the macports-tickets mailing list