[MacPorts] #63831: Unable to Upgrade postgresql13 on Lion -- Configuration Stage Fails and Also BREAKS sudo port

MacPorts noreply at macports.org
Sun Nov 7 15:31:24 UTC 2021


#63831: Unable to Upgrade postgresql13 on Lion -- Configuration Stage Fails and
Also BREAKS sudo port
--------------------+--------------------------
 Reporter:  RobK88  |      Owner:  (none)
     Type:  defect  |     Status:  new
 Priority:  Normal  |  Milestone:
Component:  ports   |    Version:  2.7.1
 Keywords:  lion    |       Port:  postgresql13
--------------------+--------------------------
 I am unable to upgrade postgresql13 on Lion.  Fails the configuration
 stage.

 {{{
 bash-3.2$ /usr/bin/sudo port -v upgrade  postgresql13
 --->  Computing dependencies for postgresql13.
 --->  Fetching distfiles for postgresql13
 --->  Verifying checksums for postgresql13
 --->  Checksumming postgresql-13.4.tar.bz2
 --->  Extracting postgresql13
 --->  Extracting postgresql-13.4.tar.bz2
 Executing:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/work"
 && /usr/bin/bzip2 -dc
 '/opt/local/var/macports/distfiles/postgresql13/postgresql-13.4.tar.bz2' |
 /usr/bin/gnutar --no-same-owner -xf -
 --->  Applying patches to postgresql13
 --->  Applying patch-no_doc.diff
 Executing:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/work/postgresql-13.4"
 && /usr/bin/patch -p0 <
 '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/postgresql13/files
 /patch-no_doc.diff'
 patching file GNUmakefile.in
 --->  Configuring postgresql13
 Executing:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/work/postgresql-13.4"
 && ./configure --prefix=/opt/local PG_SYSROOT=disabled
 --sysconfdir=/opt/local/etc/postgresql13
 --bindir=/opt/local/lib/postgresql13/bin
 --libdir=/opt/local/lib/postgresql13
 --includedir=/opt/local/include/postgresql13
 --datadir=/opt/local/share/postgresql13
 --docdir=/opt/local/share/doc/postgresql13 --mandir=/opt/local/share/man
 --with-includes=/opt/local/include --with-libraries=/opt/local/lib --with-
 openssl --with-bonjour --with-readline --with-zlib --with-libxml --with-
 libxslt --with-gssapi --enable-thread-safety --with-uuid=e2fs --with-icu
 checking build system type... x86_64-apple-darwin11.4.2
 checking host system type... x86_64-apple-darwin11.4.2
 checking which template to use... darwin
 checking whether NLS is wanted... no
 checking for default port number... 5432
 checking for block size... 8kB
 checking for segment size... 1GB
 checking for WAL block size... 8kB
 checking whether the C compiler works... yes
 checking for C compiler default output file name... a.out
 checking for suffix of executables...
 checking whether we are cross compiling... no
 checking for suffix of object files... o
 checking whether we are using the GNU C compiler... yes
 checking whether /usr/bin/clang accepts -g... yes
 checking for /usr/bin/clang option to accept ISO C89... none needed
 checking for /usr/bin/clang option to accept ISO C99... none needed
 checking whether we are using the GNU C++ compiler... yes
 checking whether /usr/bin/clang++ accepts -g... yes
 checking for gawk... gawk
 checking whether /usr/bin/clang supports -Wdeclaration-after-statement,
 for CFLAGS... yes
 checking whether /usr/bin/clang supports -Werror=vla, for CFLAGS... yes
 checking whether /usr/bin/clang supports -Wendif-labels, for CFLAGS... yes
 checking whether /usr/bin/clang++ supports -Wendif-labels, for CXXFLAGS...
 yes
 checking whether /usr/bin/clang supports -Wmissing-format-attribute, for
 CFLAGS... yes
 checking whether /usr/bin/clang++ supports -Wmissing-format-attribute, for
 CXXFLAGS... yes
 checking whether /usr/bin/clang supports -Wimplicit-fallthrough=3, for
 CFLAGS... no
 checking whether /usr/bin/clang++ supports -Wimplicit-fallthrough=3, for
 CXXFLAGS... no
 checking whether /usr/bin/clang supports -Wformat-security, for CFLAGS...
 yes
 checking whether /usr/bin/clang++ supports -Wformat-security, for
 CXXFLAGS... yes
 checking whether /usr/bin/clang supports -fno-strict-aliasing, for
 CFLAGS... yes
 checking whether /usr/bin/clang++ supports -fno-strict-aliasing, for
 CXXFLAGS... yes
 checking whether /usr/bin/clang supports -fwrapv, for CFLAGS... yes
 checking whether /usr/bin/clang++ supports -fwrapv, for CXXFLAGS... yes
 checking whether /usr/bin/clang supports -fexcess-precision=standard, for
 CFLAGS... no
 checking whether /usr/bin/clang++ supports -fexcess-precision=standard,
 for CXXFLAGS... no
 checking whether /usr/bin/clang supports -funroll-loops, for
 CFLAGS_VECTOR... yes
 checking whether /usr/bin/clang supports -ftree-vectorize, for
 CFLAGS_VECTOR... no
 checking whether /usr/bin/clang supports -Wunused-command-line-argument,
 for NOT_THE_CFLAGS... yes
 checking whether /usr/bin/clang supports -Wformat-truncation, for
 NOT_THE_CFLAGS... no
 checking whether /usr/bin/clang supports -Wstringop-truncation, for
 NOT_THE_CFLAGS... no
 checking whether the C compiler still works... yes
 checking how to run the C preprocessor... /usr/bin/clang -E
 checking for pkg-config... /opt/local/bin/pkg-config
 checking pkg-config is at least version 0.9.0... yes
 checking allow thread-safe client libraries... yes
 checking whether to build with ICU support... yes
 checking for icu-uc icu-i18n... yes
 checking whether to build with Tcl... no
 checking whether to build Perl modules... no
 checking whether to build Python modules... no
 checking whether to build with GSSAPI support... yes
 checking whether to build with PAM support... no
 checking whether to build with BSD Authentication support... no
 checking whether to build with LDAP support... no
 checking whether to build with Bonjour support... yes
 checking whether to build with OpenSSL support... yes
 checking whether to build with SELinux support... no
 checking whether to build with systemd support... no
 checking whether to build with XML support... yes
 checking for libxml-2.0 >= 2.6.23... yes
 checking for ld used by GCC... /usr/bin/ld
 checking if the linker (/usr/bin/ld) is GNU ld... no
 checking for ranlib... ranlib
 checking for strip... strip
 checking whether it is possible to strip libraries... yes
 checking for ar... ar
 checking for a BSD-compatible install... /usr/bin/install -c
 checking for tar... /usr/bin/tar
 checking whether ln -s works... yes
 checking for a thread-safe mkdir -p... /opt/local/bin/gmkdir -p
 checking for bison... /opt/local/bin/bison
 configure: using bison (GNU Bison) 3.8.2
 checking for flex... /opt/local/bin/flex
 configure: using flex 2.6.4
 checking for perl... /opt/local/bin/perl
 configure: using perl 5.28.3
 checking for a sed that does not truncate output... /opt/local/bin/gsed
 checking for grep that handles long lines and -e... /opt/local/bin/ggrep
 checking for egrep... /opt/local/bin/ggrep -E
 checking for ANSI C header files... yes
 checking for sys/types.h... yes
 checking for sys/stat.h... yes
 checking for stdlib.h... yes
 checking for string.h... yes
 checking for memory.h... yes
 checking for strings.h... yes
 checking for inttypes.h... yes
 checking for stdint.h... yes
 checking for unistd.h... yes
 checking whether /usr/bin/clang is Clang... yes
 checking whether Clang needs flag to prevent "argument unused" warning
 when linking with -pthread... no
 checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
 checking whether more special flags are required for pthreads... no
 checking for PTHREAD_PRIO_INHERIT... yes
 checking pthread.h usability... yes
 checking pthread.h presence... yes
 checking for pthread.h... yes
 checking for strerror_r... yes
 checking for getpwuid_r... yes
 checking for gethostbyname_r... no
 checking whether strerror_r returns int... yes
 checking for main in -lm... yes
 checking for library containing setproctitle... no
 checking for library containing dlopen... none required
 checking for library containing socket... none required
 checking for library containing shl_load... no
 checking for library containing getopt_long... none required
 checking for library containing shm_open... none required
 checking for library containing shm_unlink... none required
 checking for library containing clock_gettime... no
 checking for library containing fdatasync... none required
 checking for library containing sched_yield... none required
 checking for library containing gethostbyname_r... no
 checking for library containing shmget... none required
 checking for library containing backtrace_symbols... none required
 checking for library containing readline... -lreadline
 checking for inflate in -lz... yes
 checking for library containing gss_init_sec_context... -lgssapi_krb5
 checking for CRYPTO_new_ex_data in -lcrypto... yes
 checking for SSL_new in -lssl... yes
 checking for X509_get_signature_nid... yes
 checking for OPENSSL_init_ssl... yes
 checking for BIO_get_data... yes
 checking for BIO_meth_new... yes
 checking for ASN1_STRING_get0_data... yes
 checking for CRYPTO_lock... no
 checking for xmlSaveToBuffer in -lxml2... yes
 checking for xsltCleanupGlobals in -lxslt... yes
 checking for uuid_generate... yes
 checking for stdbool.h that conforms to C99... yes
 checking for _Bool... yes
 checking atomic.h usability... no
 checking atomic.h presence... no
 checking for atomic.h... no
 checking copyfile.h usability... yes
 checking copyfile.h presence... yes
 checking for copyfile.h... yes
 checking execinfo.h usability... yes
 checking execinfo.h presence... yes
 checking for execinfo.h... yes
 checking getopt.h usability... yes
 checking getopt.h presence... yes
 checking for getopt.h... yes
 checking ifaddrs.h usability... yes
 checking ifaddrs.h presence... yes
 checking for ifaddrs.h... yes
 checking langinfo.h usability... yes
 checking langinfo.h presence... yes
 checking for langinfo.h... yes
 checking mbarrier.h usability... no
 checking mbarrier.h presence... no
 checking for mbarrier.h... no
 checking poll.h usability... yes
 checking poll.h presence... yes
 checking for poll.h... yes
 checking sys/epoll.h usability... no
 checking sys/epoll.h presence... no
 checking for sys/epoll.h... no
 checking sys/event.h usability... yes
 checking sys/event.h presence... yes
 checking for sys/event.h... yes
 checking sys/ipc.h usability... yes
 checking sys/ipc.h presence... yes
 checking for sys/ipc.h... yes
 checking sys/prctl.h usability... no
 checking sys/prctl.h presence... no
 checking for sys/prctl.h... no
 checking sys/procctl.h usability... no
 checking sys/procctl.h presence... no
 checking for sys/procctl.h... no
 checking sys/pstat.h usability... no
 checking sys/pstat.h presence... no
 checking for sys/pstat.h... no
 checking sys/resource.h usability... yes
 checking sys/resource.h presence... yes
 checking for sys/resource.h... yes
 checking sys/select.h usability... yes
 checking sys/select.h presence... yes
 checking for sys/select.h... yes
 checking sys/sem.h usability... yes
 checking sys/sem.h presence... yes
 checking for sys/sem.h... yes
 checking sys/shm.h usability... yes
 checking sys/shm.h presence... yes
 checking for sys/shm.h... yes
 checking sys/sockio.h usability... yes
 checking sys/sockio.h presence... yes
 checking for sys/sockio.h... yes
 checking sys/tas.h usability... no
 checking sys/tas.h presence... no
 checking for sys/tas.h... no
 checking sys/un.h usability... yes
 checking sys/un.h presence... yes
 checking for sys/un.h... yes
 checking termios.h usability... yes
 checking termios.h presence... yes
 checking for termios.h... yes
 checking ucred.h usability... no
 checking ucred.h presence... no
 checking for ucred.h... no
 checking wctype.h usability... yes
 checking wctype.h presence... yes
 checking for wctype.h... yes
 checking for net/if.h... yes
 checking for sys/ucred.h... yes
 checking for netinet/tcp.h... yes
 checking readline/readline.h usability... yes
 checking readline/readline.h presence... yes
 checking for readline/readline.h... yes
 checking readline/history.h usability... yes
 checking readline/history.h presence... yes
 checking for readline/history.h... yes
 checking zlib.h usability... yes
 checking zlib.h presence... yes
 checking for zlib.h... yes
 checking gssapi/gssapi.h usability... yes
 checking gssapi/gssapi.h presence... yes
 checking for gssapi/gssapi.h... yes
 checking openssl/ssl.h usability... yes
 checking openssl/ssl.h presence... yes
 checking for openssl/ssl.h... yes
 checking openssl/err.h usability... yes
 checking openssl/err.h presence... yes
 checking for openssl/err.h... yes
 checking libxml/parser.h usability... yes
 checking libxml/parser.h presence... yes
 checking for libxml/parser.h... yes
 checking libxslt/xslt.h usability... yes
 checking libxslt/xslt.h presence... yes
 checking for libxslt/xslt.h... yes
 checking dns_sd.h usability... yes
 checking dns_sd.h presence... yes
 checking for dns_sd.h... yes
 checking uuid/uuid.h usability... yes
 checking uuid/uuid.h presence... yes
 checking for uuid/uuid.h... yes
 checking whether byte ordering is bigendian... no
 checking for inline... inline
 checking for printf format archetype... printf
 checking for __func__... yes
 checking for _Static_assert... yes
 checking for typeof... typeof
 checking for __builtin_types_compatible_p... yes
 checking for __builtin_constant_p... yes
 checking for __builtin_unreachable... yes
 checking for computed goto support... yes
 checking for struct tm.tm_zone... yes
 checking for union semun... yes
 checking for struct sockaddr_un... yes
 checking for struct sockaddr_storage... yes
 checking for struct sockaddr_storage.ss_family... yes
 checking for struct sockaddr_storage.__ss_family... no
 checking for struct sockaddr_storage.ss_len... yes
 checking for struct sockaddr_storage.__ss_len... no
 checking for struct sockaddr.sa_len... yes
 checking for struct addrinfo... yes
 checking for locale_t... yes (in xlocale.h)
 checking for C/C++ restrict keyword... __restrict
 checking for struct cmsgcred... no
 checking for struct option... yes
 checking for z_streamp... yes
 checking whether assembler supports x86_64 popcntq... yes
 checking for special C compiler options needed for large files... no
 checking for _FILE_OFFSET_BITS value needed for large files... no
 checking size of off_t... 0
 checking size of bool... 0
 checking for int timezone... yes
 checking types of arguments for accept()... int, int, struct sockaddr *,
 socklen_t *
 checking whether gettimeofday takes only one argument... no
 checking for wcstombs_l declaration... yes (in xlocale.h)
 checking for backtrace_symbols... yes
 checking for clock_gettime... no
 checking for copyfile... yes
 checking for fdatasync... yes
 checking for getifaddrs... yes
 checking for getpeerucred... no
 checking for getrlimit... yes
 checking for kqueue... yes
 checking for mbstowcs_l... yes
 checking for memset_s... no
 checking for poll... yes
 checking for posix_fallocate... no
 checking for ppoll... no
 checking for pstat... no
 checking for pthread_is_threaded_np... yes
 checking for readlink... yes
 checking for setproctitle... no
 checking for setproctitle_fast... no
 checking for setsid... yes
 checking for shm_open... yes
 checking for strchrnul... no
 checking for strsignal... yes
 checking for symlink... yes
 checking for sync_file_range... no
 checking for uselocale... yes
 checking for wcstombs_l... yes
 checking for __builtin_bswap16... no
 checking for __builtin_bswap32... yes
 checking for __builtin_bswap64... yes
 checking for __builtin_clz... yes
 checking for __builtin_ctz... yes
 checking for __builtin_popcount... yes
 checking for _LARGEFILE_SOURCE value needed for large files... no
 checking how /usr/bin/clang reports undeclared, standard C functions...
 warning
 checking for posix_fadvise... no
 checking whether posix_fadvise is declared... no
 checking whether fdatasync is declared... no
 checking whether strlcat is declared... yes
 checking whether strlcpy is declared... yes
 checking whether strnlen is declared... yes
 checking whether F_FULLFSYNC is declared... yes
 checking whether RTLD_GLOBAL is declared... yes
 checking whether RTLD_NOW is declared... yes
 checking for struct sockaddr_in6... yes
 checking for PS_STRINGS... no
 checking for dlopen... yes
 checking for explicit_bzero... no
 checking for fls... yes
 checking for getopt... yes
 checking for getpeereid... yes
 checking for getrusage... yes
 checking for inet_aton... yes
 checking for link... yes
 checking for mkdtemp... yes
 checking for pread... yes
 checking for pwrite... yes
 checking for random... yes
 checking for srandom... yes
 checking for strlcat... yes
 checking for strlcpy... yes
 checking for strnlen... yes
 checking for strtof... yes
 checking for setenv... yes
 checking for unsetenv... yes
 checking for getaddrinfo... yes
 checking for getopt_long... yes
 checking for syslog... yes
 checking syslog.h usability... yes
 checking syslog.h presence... yes
 checking for syslog.h... yes
 checking for opterr... yes
 checking for optreset... yes
 checking for strtoll... yes
 checking for strtoull... yes
 checking whether strtoll is declared... yes
 checking whether strtoull is declared... yes
 checking unicode/ucol.h usability... yes
 checking unicode/ucol.h presence... yes
 checking for unicode/ucol.h... yes
 checking for rl_completion_append_character... yes
 checking for rl_completion_suppress_quote... yes
 checking for rl_filename_quote_characters... yes
 checking for rl_filename_quoting_function... yes
 checking for rl_completion_matches... yes
 checking for rl_filename_completion_function... yes
 checking for rl_reset_screen_size... yes
 checking for append_history... yes
 checking for history_truncate_file... yes
 checking test program... failed
 configure: error:
 Could not execute a simple test program.  This may be a problem
 related to locating shared libraries.  Check the file 'config.log'
 for the exact reason.
 Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/work/postgresql-13.4"
 && ./configure --prefix=/opt/local PG_SYSROOT=disabled
 --sysconfdir=/opt/local/etc/postgresql13
 --bindir=/opt/local/lib/postgresql13/bin
 --libdir=/opt/local/lib/postgresql13
 --includedir=/opt/local/include/postgresql13
 --datadir=/opt/local/share/postgresql13
 --docdir=/opt/local/share/doc/postgresql13 --mandir=/opt/local/share/man
 --with-includes=/opt/local/include --with-libraries=/opt/local/lib --with-
 openssl --with-bonjour --with-readline --with-zlib --with-libxml --with-
 libxslt --with-gssapi --enable-thread-safety --with-uuid=e2fs --with-icu
 Exit code: 1
 Error: Failed to configure postgresql13: consult
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/work/postgresql-13.4/config.log
 Error: Failed to configure postgresql13: configure failure: command
 execution failed
 Error: See
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_databases_postgresql13/postgresql13/main.log
 for details.
 Error: Follow https://guide.macports.org/#project.tickets if you believe
 there is a bug.
 bash-3.2$
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/63831>
MacPorts <https://www.macports.org/>
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