<div dir="ltr">Ah. Okay. I don't really want that, so I instead uninstalled and reinstalled cdo without the openmpi variant.<div><br>Thanks,<br>Matt</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">
On Sat, Aug 16, 2014 at 3:05 PM, Ryan Schmidt <span dir="ltr"><<a href="mailto:ryandesign@macports.org" target="_blank">ryandesign@macports.org</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div class=""><br>
On Aug 16, 2014, at 2:02 PM, Matt Thompson wrote:<br>
><br>
> Takeshi,<br>
><br>
> I saw there was a new cdo port today, but when I try to upgrade it I get (discounting the ever present DNS warning):<br>
<br>
</div>The DNS warning will continue until you switch to DNS servers that work properly :)<br>
<div class=""><br>
> ---> Computing dependencies for cdo<br>
> ---> Fetching archive for cdo<br>
> Warning: Your DNS servers incorrectly claim to know the address of nonexistent hosts. This may cause checksum mismatches for some ports. See this page for more information: <<a href="https://trac.macports.org/wiki/MisbehavingServers" target="_blank">https://trac.macports.org/wiki/MisbehavingServers</a>><br>
> ---> Attempting to fetch cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from <a href="http://packages.macports.org/cdo" target="_blank">http://packages.macports.org/cdo</a><br>
> ---> Attempting to fetch cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from <a href="http://lil.fr.packages.macports.org/cdo" target="_blank">http://lil.fr.packages.macports.org/cdo</a><br>
> ---> Attempting to fetch cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from <a href="http://nue.de.packages.macports.org/macports/packages/cdo" target="_blank">http://nue.de.packages.macports.org/macports/packages/cdo</a><br>
> ---> Fetching distfiles for cdo<br>
> ---> Attempting to fetch cdo-1.6.4.tar.gz from <a href="http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/cdo" target="_blank">http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/cdo</a><br>
> ---> Attempting to fetch cdo-1.6.4.tar.gz from <a href="http://distfiles.macports.org/cdo" target="_blank">http://distfiles.macports.org/cdo</a><br>
> ---> Verifying checksums for cdo<br>
> ---> Extracting cdo<br>
> ---> Configuring cdo<br>
> Error: /opt/local/bin/h5pcc not found. Install hdf5 with an mpi variant<br>
> Error: org.macports.configure for port cdo returned:<br>
> Please see the log file for port cdo for details:<br>
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cdo/cdo/main.log<br>
> Error: Unable to upgrade port: 1<br>
> To report a bug, follow the instructions in the guide:<br>
> <a href="http://guide.macports.org/#project.tickets" target="_blank">http://guide.macports.org/#project.tickets</a><br>
><br>
> How will I know when your patch is has been applied? Or, do I need to run some port command to "clean out" something?<br>
<br>
</div>If you ran "sudo port selfupdate", then you have already received the fix.<br>
<br>
As the message says, you need to install hdf5 with an mpi variant.<br>
<br>
</blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr"><div>"And, isn't sanity really just a one-trick pony anyway? I mean all you</div><div> get is one trick: rational thinking. But when you're good and crazy, </div>
<div> oooh, oooh, oooh, the sky is the limit!" -- The Tick</div><div><br></div></div>
</div>