March 2011 - macports-tickets - lists.macosforge.org

[MacPorts] #28587: Mismatched keysums
by MacPorts 01 Mar '11

01 Mar '11

#28587: Mismatched keysums -----------------------------------+---------------------------------------- Reporter: jrvazquez@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: missmatched checksums | Port: mysql5 -----------------------------------+---------------------------------------- When trying to install mysql5 it complains about mismatched checksums on readline: {{{ $ sudo port install mysql5 + server ---> Computing dependencies for mysql5 ---> Dependencies to be installed: readline ---> Verifying checksum(s) for readline Error: Checksum (md5) mismatch for readline-6.2.tar.gz Error: Checksum (sha1) mismatch for readline-6.2.tar.gz Error: Checksum (rmd160) mismatch for readline-6.2.tar.gz Error: Target org.macports.checksum returned: Unable to verify file checksums Error: Failed to install readline Log for readline is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_devel_readline/main.log Error: The following dependencies were not installed: readline Error: Status 1 encountered during processing. To report a bug, see <http://guide.macports.org/#project.tic }}} I have checked previous tickets about mirrorservices.org, but my mirror_sites.tcl seems updated. -- Ticket URL: <https://trac.macports.org/ticket/28587> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28387: atlas is using "gcc" again
by MacPorts 01 Mar '11

01 Mar '11

#28387: atlas is using "gcc" again -------------------------------------+-------------------------------------- Reporter: ryandesign@… | Owner: jameskyle@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: | Port: atlas -------------------------------------+-------------------------------------- The latest version of atlas is using "gcc" again, instead of ${configure.cc}. This was fixed once before in #20070. -- Ticket URL: <https://trac.macports.org/ticket/28387> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28189: ATLAS - build failure
by MacPorts 01 Mar '11

01 Mar '11

#28189: ATLAS - build failure ---------------------------------------+------------------------------------ Reporter: ferdinand.gruebler@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: "ATLAS", "snow leopard" | Port: ---------------------------------------+------------------------------------ Hi, I would like to install py25-matplotlib and py25-numpy . But they depend on ATLAS. And ATLAS won"t compile on my machine saying: {{{ ---> Building atlas Error: Target org.macports.build returned: shell command failed (see log for details) Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/main.log Error: Status 1 encountered during processing. To report a bug, see <http://guide.macports.org/#project.tickets> }}} I am working on 10.6.6 (snow leopard), xcode installed - macbook pro i5. MacPorts version 1.9.2. Here is a part of the logfile: {{{ :info:build IN STAGE 1 INSTALL: SYSTEM PROBE/AUX COMPILE :info:build :info:build :info:build Level 1 cache size calculated as 32KB :info:build dFPU: Separate multiply and add instructions with 5 cycle pipeline. :info:build Apparent number of registers : 17 :info:build Register-register performance=5784.86MFLOPS :info:build sFPU: Separate multiply and add instructions with 4 cycle pipeline. :info:build Apparent number of registers : 17 :info:build Register-register performance=5650.25MFLOPS :info:build :info:build :info:build IN STAGE 2 INSTALL: TYPE-DEPENDENT TUNING :info:build :info:build :info:build STAGE 2-1: TUNING PREC='d' (precision 1 of 4) :info:build :info:build :info:build STAGE 2-1-1 : BUILDING BLOCK MATMUL TUNE :info:build make -f Makefile INSTALL_LOG/dMMRES pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG :info:build The best matmul kernel was ATL_dmm2x2x128_sse2.c, NB=56, written by R. Clint Whaley :info:build Performance: 9213.85MFLOPS (346.39 percent of of detected clock rate) :info:build (Gen case got 4586.80MFLOPS) :info:build make -f Makefile INSTALL_LOG/dNCNB pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOGmake -f Makefile INSTALL_LOG/dbestNN_56x56x56 pre=d nb=56 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG NCgemmNN : muladd=0, lat=4, pf=1, nb=56, mu=14, nu=1 ku=4, :info:build ForceFetch=1, ifetch=15 nfetch=1 :info:build Performance = 3683.41 (39.98 of copy matmul, 138.47 of clock) :info:build make -f Makefile INSTALL_LOG/dbestNT_56x56x56 pre=d nb=56 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG NCgemmNT : muladd=0, lat=8, pf=1, nb=56, mu=14, nu=1 ku=56, :info:build ForceFetch=1, ifetch=15 nfetch=1 :info:build Performance = 3770.41 (40.92 of copy matmul, 141.74 of clock) :info:build make -f Makefile INSTALL_LOG/dbestTN_56x56x56 pre=d nb=56 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG NCgemmTN : muladd=0, lat=1, pf=1, nb=56, mu=14, nu=1 ku=56, :info:build ForceFetch=1, ifetch=15 nfetch=1 :info:build Performance = 3741.57 (40.61 of copy matmul, 140.66 of clock) :info:build make -f Makefile INSTALL_LOG/dbestTT_56x56x56 pre=d nb=56 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG NCgemmTT : muladd=0, lat=1, pf=1, nb=56, mu=14, nu=1 ku=56, :info:build ForceFetch=1, ifetch=15 nfetch=1 :info:build Performance = 3045.51 (33.05 of copy matmul, 114.49 of clock) :info:build make -f Makefile MMinstall pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMMSEARCH.LOG :info:build :info:build :info:build STAGE 2-1-2: CacheEdge DETECTION :info:build make -f Makefile INSTALL_LOG/atlas_cacheedge.h pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMMCACHEEDGE.LOG :info:build :info:build :info:build STAGE 2-1-3: LARGE/SMALL CASE CROSSOVER DETECTION :info:build :info:build :info:build STAGE 2-1-3: COPY/NO-COPY CROSSOVER DETECTION :info:build make -f Makefile INSTALL_LOG/dXover.h pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMMCROSSOVER.LOG :info:build done. :info:build :info:build :info:build STAGE 2-1-4: LEVEL 3 BLAS TUNE :info:build make -f Makefile INSTALL_LOG/atlas_dtrsmXover.h pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dL3TUNE.LOG :info:build make -f Makefile dcblaslib 2>&1 | ./xatlas_tee INSTALL_LOG/dL3TUNE.LOG :info:build done. :info:build :info:build :info:build STAGE 2-1-5: GEMV TUNE :info:build make -f Makefile INSTALL_LOG/dMVRES pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dMVTUNE.LOG :info:build gemvN : chose routine 3:ATL_gemvN_1x1_1a.c written by R. Clint Whaley :info:build Yunroll=32, Xunroll=1, using 96 percent of L1 :info:build Performance = 1565.78 (16.99 of copy matmul, 58.86 of clock) :info:build gemvT : chose routine 105:ATL_gemvT_2x16_1.c written by R. Clint Whaley :info:build Yunroll=2, Xunroll=16, using 96 percent of L1 :info:build Performance = 1457.26 (15.82 of copy matmul, 54.78 of clock) :info:build :info:build :info:build STAGE 2-1-6: GER TUNE :info:build make -f Makefile INSTALL_LOG/dR1RES pre=d 2>&1 | ./xatlas_tee INSTALL_LOG/dR1TUNE.LOG :info:build ger : chose routine 1:ATL_ger1_axpy.c written by R. Clint Whaley :info:build mu=16, nu=1, using 0.87 percent of L1 Cache :info:build Performance = 1135.36 (12.32 of copy matmul, 42.68 of clock) :info:build :info:build :info:build STAGE 2-2: TUNING PREC='s' (precision 2 of 4) :info:build :info:build :info:build STAGE 2-2-1 : BUILDING BLOCK MATMUL TUNE :info:build make -f Makefile INSTALL_LOG/sMMRES pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG :info:build The best matmul kernel was ATL_smm14x1x84_sse.c, NB=84, written by R. Clint Whaley :info:build Performance: 13507.18MFLOPS (507.79 percent of of detected clock rate) :info:build (Gen case got 4217.26MFLOPS) :info:build make -f Makefile INSTALL_LOG/sNCNB pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOGmake -f Makefile INSTALL_LOG/sbestNN_48x48x48 pre=s nb=48 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG NCgemmNN : muladd=1, lat=4, pf=513, nb=48, mu=7, nu=1 ku=4, :info:build ForceFetch=0, ifetch=7 nfetch=1 :info:build Performance = 3195.87 (23.66 of copy matmul, 120.15 of clock) :info:build make -f Makefile INSTALL_LOG/sbestNT_48x48x48 pre=s nb=48 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG NCgemmNT : muladd=1, lat=6, pf=513, nb=48, mu=7, nu=1 ku=48, :info:build ForceFetch=0, ifetch=7 nfetch=1 :info:build Performance = 3041.97 (22.52 of copy matmul, 114.36 of clock) :info:build make -f Makefile INSTALL_LOG/sbestTN_48x48x48 pre=s nb=48 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG NCgemmTN : muladd=1, lat=3, pf=513, nb=48, mu=7, nu=1 ku=48, :info:build ForceFetch=0, ifetch=7 nfetch=1 :info:build Performance = 3699.20 (27.39 of copy matmul, 139.07 of clock) :info:build make -f Makefile INSTALL_LOG/sbestTT_48x48x48 pre=s nb=48 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG NCgemmTT : muladd=1, lat=4, pf=513, nb=48, mu=7, nu=1 ku=48, :info:build ForceFetch=0, ifetch=7 nfetch=1 :info:build Performance = 3226.16 (23.88 of copy matmul, 121.28 of clock) :info:build make -f Makefile MMinstall pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sMMSEARCH.LOG :info:build :info:build :info:build STAGE 2-2-2: CacheEdge DETECTION :info:build :info:build :info:build STAGE 2-2-3: LARGE/SMALL CASE CROSSOVER DETECTION :info:build :info:build :info:build STAGE 2-2-3: COPY/NO-COPY CROSSOVER DETECTION :info:build make -f Makefile INSTALL_LOG/sXover.h pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sMMCROSSOVER.LOG :info:build done. :info:build :info:build :info:build STAGE 2-2-4: LEVEL 3 BLAS TUNE :info:build make -f Makefile INSTALL_LOG/atlas_strsmXover.h pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sL3TUNE.LOG :info:build make -f Makefile scblaslib 2>&1 | ./xatlas_tee INSTALL_LOG/sL3TUNE.LOG :info:build done. :info:build :info:build :info:build STAGE 2-2-5: GEMV TUNE :info:build make -f Makefile INSTALL_LOG/sMVRES pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sMVTUNE.LOG :info:build gemvN : chose routine 3:ATL_gemvN_1x1_1a.c written by R. Clint Whaley :info:build Yunroll=32, Xunroll=1, using 100 percent of L1 :info:build Performance = 2874.33 (21.28 of copy matmul, 108.06 of clock) :info:build gemvT : chose routine 105:ATL_gemvT_2x16_1.c written by R. Clint Whaley :info:build Yunroll=2, Xunroll=16, using 100 percent of L1 :info:build Performance = 1978.01 (14.64 of copy matmul, 74.36 of clock) :info:build :info:build :info:build STAGE 2-2-6: GER TUNE :info:build make -f Makefile INSTALL_LOG/sR1RES pre=s 2>&1 | ./xatlas_tee INSTALL_LOG/sR1TUNE.LOG :info:build ger : chose routine 1:ATL_ger1_axpy.c written by R. Clint Whaley :info:build mu=16, nu=1, using 0.56 percent of L1 Cache :info:build Performance = 4207.98 (31.15 of copy matmul, 158.19 of clock) :info:build :info:build :info:build STAGE 2-3: TUNING PREC='z' (precision 3 of 4) :info:build :info:build :info:build STAGE 2-3-1 : BUILDING BLOCK MATMUL TUNE :info:build make -f Makefile INSTALL_LOG/zMMRES pre=z 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG :info:build The best matmul kernel was ATL_dmm4x2x128_sse2.c, NB=56, written by Whaley & Voronenko :info:build Performance: 7511.28MFLOPS (282.38 percent of of detected clock rate) :info:build (Gen case got 4424.50MFLOPS) :info:build make -f Makefile INSTALL_LOG/zNCNB pre=z 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOGmake -f Makefile INSTALL_LOG/zbestNN_36x36x36 pre=z nb=36 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG NCgemmNN : muladd=0, lat=2, pf=1, nb=36, mu=13, nu=1 ku=4, :info:build ForceFetch=1, ifetch=13 nfetch=1 :info:build Performance = 3323.76 (44.25 of copy matmul, 124.95 of clock) :info:build make -f Makefile INSTALL_LOG/zbestNT_36x36x36 pre=z nb=36 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG NCgemmNT : muladd=0, lat=6, pf=1, nb=36, mu=13, nu=1 ku=36, :info:build ForceFetch=1, ifetch=13 nfetch=1 :info:build Performance = 3182.73 (42.37 of copy matmul, 119.65 of clock) :info:build make -f Makefile INSTALL_LOG/zbestTN_36x36x36 pre=z nb=36 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG NCgemmTN : muladd=0, lat=1, pf=1, nb=36, mu=13, nu=1 ku=36, :info:build ForceFetch=1, ifetch=13 nfetch=1 :info:build Performance = 3733.61 (49.71 of copy matmul, 140.36 of clock) :info:build make -f Makefile INSTALL_LOG/zbestTT_36x36x36 pre=z nb=36 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG NCgemmTT : muladd=0, lat=6, pf=1, nb=36, mu=13, nu=1 ku=36, :info:build ForceFetch=1, ifetch=13 nfetch=1 :info:build Performance = 3271.50 (43.55 of copy matmul, 122.99 of clock) :info:build make -f Makefile MMinstall pre=z 2>&1 | ./xatlas_tee INSTALL_LOG/zMMSEARCH.LOG :info:build :info:build :info:build STAGE 2-3-2: CacheEdge DETECTION :info:build make -f Makefile INSTALL_LOG/atlas_zdNKB.h pre=z 2>&1 | ./xatlas_tee INSTALL_LOG/zMMCACHEEDGE.LOG :info:build make[1]: *** [build] Error 255 :info:build make: *** [build] Error 2 :info:build shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/work/atlas-3.8.3/build" && /usr/bin/make build " returned error 2 :error:build Target org.macports.build returned: shell command failed (see log for details) :debug:build Backtrace: shell command failed (see log for details) while executing "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "$procedure $targetname" :info:build Warning: the following items did not execute (for atlas): org.macports.activate org.macports.build org.macports.destroot org.macports.install :notice:build Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/main.log }}} -- Ticket URL: <https://trac.macports.org/ticket/28189> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28567: gnuradio 3.3.0 installed but cannot run any script
by MacPorts 01 Mar '11

01 Mar '11

#28567: gnuradio 3.3.0 installed but cannot run any script -----------------------------------+---------------------------------------- Reporter: haxor@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: | Port: -----------------------------------+---------------------------------------- I am having the same problem as in Ticket #28315. My output from port installed | grep gnuradio is the same. However, ls /opt/local/lib/python2.6/site-packages returns: gnuradio grc_gnuradio usrpm (thus, there is no reference to xcbgen as exists in ticket #28315) When I restart the shell, I still get the same error when I try to run, for example, usrp_probe: machinegeekcoms-Mac-mini:~ machinegeekcom$ usrp_probeTraceback (most recent call last): File "/opt/local/bin/usrp_probe", line 21, in <module> from gnuradio import usrp ImportError: No module named gnuradio machinegeekcoms-Mac-mini:~ machinegeekcom$ Any assistance will be appreciated. -- Ticket URL: <https://trac.macports.org/ticket/28567> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28584: sleuthkit update to 3.2.1
by MacPorts 01 Mar '11

01 Mar '11

#28584: sleuthkit update to 3.2.1 -------------------------------------+-------------------------------------- Reporter: jessekornblum@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: | Port: sleuthkit -------------------------------------+-------------------------------------- Attached please find an updated Portfile for SleuthKit, updating it to version 3.2.1. -- Ticket URL: <https://trac.macports.org/ticket/28584> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28276: Upgrade ARB 5.2 -> 5.2.1
by MacPorts 01 Mar '11

01 Mar '11

#28276: Upgrade ARB 5.2 -> 5.2.1 ----------------------------------+----------------------------------------- Reporter: matt.cottrell@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: libpng | Port: arb ----------------------------------+----------------------------------------- This is an upgrade of ARB 5.2 to 5.2.1. ARB was broken by the MacPorts upgrade from libpng 1.2.44 to 1.4.5 three weeks ago as identified by ticket #28238. The solution for now is to explicitly specify in the makefile -l png12, which lives in /usr/X11R6/lib/libpng12.dylib. I'm including fixes to some minor issues as well. -- Ticket URL: <https://trac.macports.org/ticket/28276> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28581: repo @1.9 Checksum mismatch
by MacPorts 01 Mar '11

01 Mar '11

#28581: repo @1.9 Checksum mismatch ----------------------------------------+----------------------------------- Reporter: ali.rahimi.intel@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: | Port: repo ----------------------------------------+----------------------------------- I'm getting the following error: {{{ ---> Verifying checksum(s) for repo Error: Checksum (md5) mismatch for repo Error: Checksum (sha1) mismatch for repo Error: Checksum (rmd160) mismatch for repo Error: Target org.macports.checksum returned: Unable to verify file checksums Log for repo is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_repo/main.log Error: Status 1 encountered during processing. To report a bug, see <http://guide.macports.org/#project.tickets> chainwhip:gln ali$ sudo port clean repo ---> Cleaning repo chainwhip:gln ali$ sudo port uninstall repo chainwhip:gln ali$ sudo port list repo repo @1.9 python/repo }}} This is after I do selfupdate and clean on repo. The directory /opt/local/var/macports/logs/ mentioned above is empty. {{{ 10.6.0 Darwin Kernel Version 10.6.0: Wed Nov 10 18:13:17 PST 2010; root:xnu-1504.9.26~3/RELEASE_I386 i386 }}} I'd appreciate some gentility as this is my first macports bug report. -- Ticket URL: <https://trac.macports.org/ticket/28581> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #28578: Update from 1.0.0 to 1.0.2
by MacPorts 01 Mar '11

01 Mar '11

#28578: Update from 1.0.0 to 1.0.2 ---------------------------------+------------------------------------------ Reporter: ranauei@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 1.9.2 Keywords: haspatch maintainer | Port: libftd2xx ---------------------------------+------------------------------------------ Latest version of the FTDI's proprietary driver (library) which allow direct access to its chips. -- Ticket URL: <https://trac.macports.org/ticket/28578> MacPorts <http://www.macports.org/> Ports system for Mac OS

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