October 2013 - macports-tickets - lists.macosforge.org

[MacPorts] #41028: Upgrade lrzsz on Port 2.2.1 on Mavericks 10.9 break
by MacPorts 28 Oct '13

28 Oct '13

#41028: Upgrade lrzsz on Port 2.2.1 on Mavericks 10.9 break ------------------------+-------------------------------- Reporter: macports@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: lrzsz | Port: lrzsz ------------------------+-------------------------------- {{{ sudo port upgrade outdated ---> Fetching archive for lrzsz ---> Attempting to fetch lrzsz-0.12.20_1.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/lrzsz ---> Attempting to fetch lrzsz-0.12.20_1.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/lrzsz ---> Attempting to fetch lrzsz-0.12.20_1.darwin_13.x86_64.tbz2 from http://packages.macports.org/lrzsz ---> Fetching distfiles for lrzsz ---> Verifying checksums for lrzsz ---> Extracting lrzsz ---> Applying patches to lrzsz ---> Configuring lrzsz ---> Building lrzsz ---> Staging lrzsz into destroot Error: org.macports.destroot for port lrzsz returned: command execution failed Please see the log file for port lrzsz for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/main.log Error: Unable to upgrade port: 1 To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets }}} cat /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/main.log ->> {{{ comms_lrzsz/lrzsz/work/destroot/opt/local/bin/sz :info:destroot rm -f /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/destroot//opt/local/bin/`echo lsb | sed -e 's/l//'` :info:destroot ln /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/destroot//opt/local/bin/`echo lsz |sed -e 's/l//'` \ :info:destroot /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/destroot//opt/local/bin/`echo lsb |sed -e 's/l//'` :info:destroot rm -f /opt/local/bin/`echo lsx | sed -e 's/l//'` :info:destroot rm: /opt/local/bin/sx: Operation not permitted :info:destroot make[1]: *** [install-exec-local] Error 1 :info:destroot make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/lrzsz-0.12.20/src' :info:destroot make: *** [install-recursive] Error 1 :info:destroot make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/lrzsz-0.12.20' :info:destroot Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/lrzsz-0.12.20" && /usr/bin/make -w install DESTDIR=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_comms_lrzsz/lrzsz/work/destroot :info:destroot Exit code: 2 :error:destroot org.macports.destroot for port lrzsz returned: command execution failed :debug:destroot Error code: CHILDSTATUS 26313 2 :debug:destroot Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" }}} -- Ticket URL: <https://trac.macports.org/ticket/41028> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #41030: petsc: hdf5-18 is installed without +fortran
by MacPorts 28 Oct '13

28 Oct '13

#41030: petsc: hdf5-18 is installed without +fortran ------------------------+-------------------------------- Reporter: davydden@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: petsc ------------------------+-------------------------------- I have the following ports installed (10.9, Xcode 5.0): {{{ sudo port install openmpi +gcc48 sudo port install atlas +clang }}} On invoking: {{{ sudo port install petsc +atlas +openmpi }}} one gets: {{{ Error: org.macports.archivefetch for port petsc returned: hdf5-18 must be installed with +fortran. }}} This is not the case if hdf5-18 is already installed via: {{{ sudo port install hdf5-18 +fortran +openmpi }}} In such a case petsc compiles fine. -- Ticket URL: <https://trac.macports.org/ticket/41030> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #36750: Trying to change directory to current cause hang up in fish
by MacPorts 28 Oct '13

28 Oct '13

#36750: Trying to change directory to current cause hang up in fish -----------------------------+-------------------------------- Reporter: alex.dorokhov@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.2 Keywords: | Port: fish -----------------------------+-------------------------------- Changing directory to parent or another one (without cd) with this approach: [[BR]] $ .. [[BR]] $ ./another_one [[BR]] works great. [[BR]] However if you made a mistake and instead of ".." try to call ".": [[BR]] $ . [[BR]] fish will freeze. And nothing you can do with current terminal. -- Ticket URL: <https://trac.macports.org/ticket/36750> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #40926: Update: dnstop to 20121017
by MacPorts 28 Oct '13

28 Oct '13

#40926: Update: dnstop to 20121017 ----------------------------+-------------------------------- Reporter: brian.andrew@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: haspatch | Port: dnstop ----------------------------+-------------------------------- Adds support for the qtype-any filter and fixes the refused filter. -- Ticket URL: <https://trac.macports.org/ticket/40926> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #35601: malloc problem in claws-mail
by MacPorts 28 Oct '13

28 Oct '13

#35601: malloc problem in claws-mail ---------------------------------------+------------------------------------ Reporter: jurgen.defurne@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.2 Keywords: | Port: claws-mail ---------------------------------------+------------------------------------ After upgrading to Mountain Lion and updating ports, the only problem I still have is that claws-mail has become unstable due to a malloc problem: {{{ claws-mail(3106) malloc: *** error for object 0x7ff5450216e8: incorrect checksum for freed object - object was probably modified after being freed. *** set a breakpoint in malloc_error_break to debug claws-mail(3106) malloc: *** error for object 0x7ff5450216e8: incorrect checksum for freed object - object was probably modified after being freed. *** set a breakpoint in malloc_error_break to debug decraemerDataNewsclaws.c:101:Starting Claws Mail version Claws Mail 3.8.0 main.c:848:runtime GTK+ 2.24.10 / GLib 2.32.4 main.c:856:buildtime GTK+ 2.24.10 / GLib 2.32.4 main.c:865:Compiled-in features: main.c:870: compface main.c:876: aspell main.c:882: gnutls main.c:888: ipv6 main.c:894: iconv main.c:906: ldap main.c:912: libetpan 1.1 main.c:918: libsm }}} Maybe this is an upstream problem? -- Ticket URL: <https://trac.macports.org/ticket/35601> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #40288: cannot launch
by MacPorts 28 Oct '13

28 Oct '13

#40288: cannot launch --------------------------+-------------------------------- Reporter: igsterling@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: claws-mail --------------------------+-------------------------------- I am running Mountain Lion 10.8.4 and my ports are all up to date. When I launch claws-mail I get this error: igsmacbookpro:~ igs$ claws-mail (claws-mail:21841): Gtk-WARNING **: cannot open display: I installed XQuartz from https://xquartz.macosforge.org/landing/ and still can't get the port to launch. -- Ticket URL: <https://trac.macports.org/ticket/40288> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #41019: New minor release of Bob (1.2.2)
by MacPorts 28 Oct '13

28 Oct '13

#41019: New minor release of Bob (1.2.2) ---------------------------------+-------------------------------- Reporter: andre.dos.anjos@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: haspatch maintainer | Port: bob ---------------------------------+-------------------------------- Hello, Could you please update the minor release of Bob to 1.2.2? Portfile diff attached. (Changelog: https://github.com/idiap/bob/wiki/Changelog- from-1.2.1-to-1.2.2) Thanks, André -- Ticket URL: <https://trac.macports.org/ticket/41019> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #41023: netpbm doesn't build behind proxy
by MacPorts 28 Oct '13

28 Oct '13

#41023: netpbm doesn't build behind proxy -------------------------+-------------------------------- Reporter: s.t.smith@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: netpbm -------------------------+-------------------------------- macports, bash, and svn all set up correctly to use firewall proxy. {{{ export http_proxy=http://proxy:8000 export https_proxy=http://proxy:8000 vi ~/.subversion/servers : [global] http-proxy-host = proxy http-proxy-port = 8000 }}} Build of netpbm fails, affecting many other MacPort dependencies. Error: {{{ Error: org.macports.fetch for port netpbm returned: Subversion check out failed }}} Issuing the failed command in Terminal, {{{ cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_netpbm/netpbm/work" && /usr/bin/svn --non-interactive --trust-server-cert export svn://svn.code.sf.net/p/netpbm/code/advanced/@2009 2>&1 svn: E000054: Unable to connect to a repository at URL 'svn://svn.code.sf.net/p/netpbm/code/advanced' svn: E000054: Can't read from connection: Connection reset by peer }}} The command fails in the same way using both OS X Mavericks 10.9's /usr/bin/svn and MacPorts's /opt/local/bin/svn compiled on Mavericks 10.9. -- Ticket URL: <https://trac.macports.org/ticket/41023> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #40685: Atlas depends on gnutar
by MacPorts 28 Oct '13

28 Oct '13

#40685: Atlas depends on gnutar -------------------------+-------------------------------- Reporter: sebastian@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.0 Keywords: | Port: atlas -------------------------+-------------------------------- On my machine building atlas failed because "gnutar" was not available. I suggest to add the gnutar package to the dependencies. {{{ sudo port install atlas +gcc47 ---> Computing dependencies for atlas ---> Extracting atlas Error: org.macports.extract for port atlas returned: command execution failed Please see the log file for port atlas for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port atlas failed }}} -- Ticket URL: <https://trac.macports.org/ticket/40685> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #40954: smlnj port needs update for Mavericks
by MacPorts 28 Oct '13

28 Oct '13

#40954: smlnj port needs update for Mavericks ------------------------------+-------------------------------- Reporter: gary.verhaegen@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.2.1 Keywords: | Port: smlnj ------------------------------+-------------------------------- This is similar to https://trac.macports.org/ticket/30361, but for Mavericks. The following patch: {{{ $ diff arch-n-opsys arch-n-opsys.patched 47a48 > 13*) OPSYS=darwin; HEAP_OPSYS=darwin ;; # MacOS X 10.9 Mavericks }}} applied to file /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_lang_smlnj/smlnj/work/smlnj-110.75/config/_arch-n-opsys seems to fix the problem. -- Ticket URL: <https://trac.macports.org/ticket/40954> MacPorts <http://www.macports.org/> Ports system for OS X

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