April 2013 - macports-tickets - lists.macosforge.org

[MacPorts] #24520: activation of wrong version
by MacPorts 11 Apr '13

11 Apr '13

#24520: activation of wrong version ---------------------------------+------------------------------------------ Reporter: ottd@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: base | Version: 1.8.2 Keywords: | Port: ---------------------------------+------------------------------------------ I found the following strange behaviour: {{{ > sudo port install zlib(a)1.2.3_4+universal ---> Computing dependencies for zlib ---> Deactivating zlib @1.2.4_1 ---> Activating zlib @1.2.4_1+universal ---> Cleaning zlib > port installed zlib The following ports are currently installed: zlib @1.2.3_3 zlib @1.2.3_4 zlib @1.2.4_1 zlib @1.2.4_1+universal (active) > port MacPorts 1.8.2 }}} I expected actually that the 1.2.3_4 version would be re-compiled as universal library with the first command shown. Maybe this is similar to #17367 ? -- Ticket URL: <http://trac.macports.org/ticket/24520> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #38764: "install boost @1.52.0" should not install a later version without comment
by MacPorts 11 Apr '13

11 Apr '13

#38764: "install boost @1.52.0" should not install a later version without comment --------------------+-------------------------------- Reporter: dave@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: --------------------+-------------------------------- Z% sudo /opt/local/bin/port install boost @1.52.0 ---> Computing dependencies for boost ---> Fetching archive for boost ---> Attempting to fetch boost-1.53.0_1+no_single+no_static+python27.darwin_12.x86_64.tbz2 from http://packages.macports.org/boost ---> Attempting to fetch boost-1.53.0_1+no_single+no_static+python27.darwin_12.x86_64.tbz2.rmd160 from http://packages.macports.org/boost ---> Installing boost @1.53.0_1+no_single+no_static+python27 ---> Activating boost @1.53.0_1+no_single+no_static+python27 ---> Cleaning boost ---> Updating database of binaries: 100.0% ---> Scanning binaries for linking errors: 100.0% ---> No broken files found. Z% I asked for @1.52.0, a perfectly reasonable thing to do, but port instead installs 1.53.0. This is wrong. Port should install the version I asked for, or if it can't or won't, then it should complain and exit nonzero. Until such time as port would be so kind as to actually install an asked-for old version, it could help by printing out the svn command I would need to use to get the old version, or better yet, a shell command that gets it and puts it in the right place. -- Ticket URL: <https://trac.macports.org/ticket/38764> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38752: makefile variables in petsc +Accelerate refer to ATLAS libs
by MacPorts 11 Apr '13

11 Apr '13

#38752: makefile variables in petsc +Accelerate refer to ATLAS libs ---------------------------+-------------------------------- Reporter: kingcrimson@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: petsc ---------------------------+-------------------------------- I installed petsc +Accelerate but the file /opt/local/lib/petsc/conf/petscvariables contains {{{#!makefile PETSC_EXTERNAL_LIB_BASIC = -lX11 -L/opt/local/lib/petsc/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lblacs -lparmetis -lmetis -lml -lptesmumps -lptscotch -lptscotcherr -lpthread -L/opt/local/lib -lyaml -L/usr/lib -llapack -lblas -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -ldl -lmpi_f90 -lmpi_f77 -lmpi -lm -lgfortran -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -L/opt/local/lib/gcc47 -lgfortran -lSystem -lgcc_ext.10.5 -lquadmath -lm -lm -lm -lz -lz -ldl HDF5_LIB = -L/opt/local/lib -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz }}} that causes the attached example to fail with this error {{{ $ make 3_petsc_mat /opt/local/bin/openmpicxx -o 3_petsc_mat.o -c -O2 -O2 -I/opt/local/lib/petsc/include -I/opt/local/lib/petsc/include -I/opt/local/include -I/opt/local/include/openmpi -D__INSDIR__= 3_petsc_mat.c clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated --> Linking the executable... <-- /opt/local/bin/openmpicxx -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -O2 -O2 -o 3_petsc_mat 3_petsc_mat.o -L/opt/local/lib/petsc/lib -lpetsc -lX11 -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lblacs -lparmetis -lmetis -lml -lptesmumps -lptscotch -lptscotcherr -lpthread -L/opt/local/lib -lyaml -L/usr/lib -llapack -lblas -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -ldl -lmpi_f90 -lmpi_f77 -lmpi -lm -lgfortran -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -L/opt/local/lib/gcc47 -lgfortran -lSystem -lgcc_ext.10.5 -lquadmath -lm -lm -lm -lz -lz -ldl Undefined symbols for architecture x86_64: "_ATL_dger", referenced from: _ATL_dgetf2 in liblapack.a(ATL_dgetf2.o) "_ATL_xerbla", referenced from: _atl_f77wrap_dgetrf_ in liblapack.a(ATL_f77wrap_dgetrf.o) _atl_f77wrap_dgetrs_ in liblapack.a(ATL_f77wrap_dgetrs.o) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) make: [3_petsc_mat] Error 1 (ignored) /bin/rm -f 3_petsc_mat.o -->...done. <-- }}} changing {{{ -L/usr/lib -llapack -lblas }}} to {{{ -Wl,-framework -Wl,Accelerate }}} in /opt/local/lib/petsc/conf/petscvariables fixes the problem for me -- Ticket URL: <https://trac.macports.org/ticket/38752> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38616: Update: yara to 1.7
by MacPorts 11 Apr '13

11 Apr '13

#38616: Update: yara to 1.7 --------------------------+-------------------------------- Reporter: a.schuster@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: yara --------------------------+-------------------------------- Updated YARA to version 1.7. Added variants to build either with re2 or pcre support. -- Ticket URL: <https://trac.macports.org/ticket/38616> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38711: xmp @4.0.1 Updated xmp to 4.0.2
by MacPorts 11 Apr '13

11 Apr '13

#38711: xmp @4.0.1 Updated xmp to 4.0.2 ------------------------+-------------------------------- Reporter: dcarmich@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: xmp ------------------------+-------------------------------- I have updated xmp itself to 4.0.2 (which fixes the Snow Leopard CoreAudio type bug). A patch is attached. -- Ticket URL: <https://trac.macports.org/ticket/38711> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38704: xmp @4.0.1 Updated libxmp to 4.0.4
by MacPorts 11 Apr '13

11 Apr '13

#38704: xmp @4.0.1 Updated libxmp to 4.0.4 ------------------------+-------------------------------- Reporter: dcarmich@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: xmp ------------------------+-------------------------------- I have updated libxmp to 4.0.4. A patch is attached. -- Ticket URL: <https://trac.macports.org/ticket/38704> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38760: php53 openssl extension
by MacPorts 11 Apr '13

11 Apr '13

#38760: php53 openssl extension --------------------+--------------------------------- Reporter: joel@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: php53 php53-openssl --------------------+--------------------------------- I have both php53 and php53-openssl installed. When I issue phpinfo() from a script, I expected to see "--with-openssl" in the configure command. Yet, I don't see it (though I do see other references to openssl later in the page). Looking at the portfile, it seems that these configure args are supposed to be appended. https://trac.macports.org/browser/trunk/dports/lang/php/Portfile#L749 Is there something I should do to get the portfile to actually append these args? -- Ticket URL: <https://trac.macports.org/ticket/38760> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #38714: 'upgrade outdated' fails configuring poppler
by MacPorts 11 Apr '13

11 Apr '13

#38714: 'upgrade outdated' fails configuring poppler ---------------------+-------------------------------- Reporter: skarl@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.3 Keywords: | Port: poppler ---------------------+-------------------------------- Hi, I noticed that several port utilities do not work properly anymore (e.g. latex from texlive, xdvi, dvips, dvipdf, etc.). Therefore, after a successful 'selfupdate', I tried 'sudo port upgrade outdated'. However, this failed when configuring 'poppler' for the upgrade. Saying: ---> Computing dependencies for poppler ---> Fetching archive for poppler ---> Attempting to fetch poppler-0.22.2_0.darwin_11.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/poppler ---> Attempting to fetch poppler-0.22.2_0.darwin_11.x86_64.tbz2 from http://lil.fr.packages.macports.org/poppler ---> Attempting to fetch poppler-0.22.2_0.darwin_11.x86_64.tbz2 from http://packages.macports.org/poppler ---> Fetching distfiles for poppler ---> Verifying checksum(s) for poppler ---> Extracting poppler ---> Configuring poppler Error: org.macports.configure for port poppler returned: configure failure: command execution failed Please see the log file for port poppler for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_poppler/poppler/main.log Error: Unable to upgrade port: 1 To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets The interesting bits from /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_poppler/poppler/main.log read: :info:configure checking for pkg-config... /opt/local/bin/pkg-config :info:configure checking pkg-config is at least version 0.9.0... dyld: Library not loaded: /opt/local/lib/libiconv.2.dylib :info:configure Referenced from: /opt/local/bin/pkg-config :info:configure Reason: Incompatible library version: pkg-config requires version 8.0.0 or later, but libiconv.2.dylib provides version 7.0.0 :info:configure ./configure: line 17618: 46097 Trace/BPT trap: 5 $PKG_CONFIG --atleast-pkgconfig-version $_pkg_min_version :info:configure no and at the end: :info:configure checking for LIBCURL... no :info:configure configure: error: in `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_poppler/poppler/work/poppler-0.22.2': :info:configure configure: error: The pkg-config script could not be found or is too old. Make sure it :info:configure is in your PATH or set the PKG_CONFIG environment variable to the full :info:configure path to pkg-config. :info:configure :info:configure Alternatively, you may set the environment variables LIBCURL_CFLAGS :info:configure and LIBCURL_LIBS to avoid the need to call pkg-config. :info:configure See the pkg-config man page for more details. :info:configure :info:configure To get pkg-config, see <http://pkg- config.freedesktop.org/>. :info:configure See `config.log' for more details :info:configure Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_poppler/poppler/work/poppler-0.22.2" && ./configure --prefix=/opt/local --disable-introspection --disable- poppler-qt4 --disable-gtk-test --disable-silent-rules --enable-xpdf- headers --enable-zlib --enable-libcurl --enable-poppler-glib --mandir=/opt/local/share/man --x-includes=/opt/local/include --x-libraries=/opt/local/lib :info:configure Exit code: 1 :error:configure org.macports.configure for port poppler returned: configure failure: command execution failed :debug:configure Error code: NONE :debug:configure Backtrace: configure failure: command execution failed while executing "$procedure $targetname" :info:configure Warning: targets not executed for poppler: org.macports.install org.macports.configure org.macports.build org.macports.destroot :notice:configure Please see the log file for port poppler for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_graphics_poppler/poppler/main.log What can I do there? I was short to re-install macports as a whole :) Thanks and best wishes, Simon -- Ticket URL: <https://trac.macports.org/ticket/38714> MacPorts <http://www.macports.org/> Ports system for OS X

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[MacPorts] #35292: p5-pdl @2.4.6_3 Build failure
by MacPorts 11 Apr '13

11 Apr '13

#35292: p5-pdl @2.4.6_3 Build failure --------------------------------+------------------------------------------- Reporter: cbroussa@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.1.1 Keywords: | Port: --------------------------------+------------------------------------------- Build fails with the error Proj.xs:26:10: fatal error: 'projects.h' file not found #include "projects.h" Seems to be a similar issue that effected the '''grass''' package, among others, where ''projects.h'' was removed from the '''proj''' package and the dependent package wasn't updated to reflect that change. See Ticket #34981 -- Ticket URL: <https://trac.macports.org/ticket/35292> MacPorts <http://www.macports.org/> Ports system for Mac OS

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[MacPorts] #38761: RFE: add a `--conflicts` flag to `port info`
by MacPorts 11 Apr '13

11 Apr '13

#38761: RFE: add a `--conflicts` flag to `port info` -------------------------+-------------------------------- Reporter: egall@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: base | Version: 2.1.3 Keywords: | Port: -------------------------+-------------------------------- `port help info` lists the following flags available for `port info`: {{{ --category --categories --depends_fetch --depends_extract --depends_build --depends_lib --depends_run --depends --description --epoch --fullname --heading --homepage --index --license --line --long_description --maintainer --maintainers --name --platform --platforms --portdir --pretty --replaced_by --revision --subports --variant --variants --version }}} This covers most of the fields normally displayed by `port info`, however, it doesn't look like there's one for the `conflicts` field. It'd be useful to have a `--conflicts` flag for `port info` to make it easier to use in scripts in which one might want to know what ports a given port conflicts with. It could also have the command `port conflicts` as an alias or something. (I think I might have brought this up in irc before, but I forget if it was this or something else...) -- Ticket URL: <https://trac.macports.org/ticket/38761> MacPorts <http://www.macports.org/> Ports system for OS X

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