September 2015 - macports-tickets - lists.macosforge.org

[MacPorts] #46736: mpich-dragonegg33 @3.1.3 +fortran/mpich-devel-dragonegg33 @3.2a2 +fortran linking fails
by MacPorts 19 Oct '15

19 Oct '15

#46736: mpich-dragonegg33 @3.1.3 +fortran/mpich-devel-dragonegg33 @3.2a2 +fortran linking fails ------------------------+-------------------------------- Reporter: dstrubbe@… | Owner: sean@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: mpich, mpich-devel ------------------------+-------------------------------- Linking fails for these ports for me on OSX 10.8.5. openmpi-dragonegg33 builds ok though. This is the error: {{{ :info:build libtool: link: /opt/local/bin/dragonegg-3.3-gcc -pipe -m64 -O2 -Wl,-headerpad_max_install_names -Wl,-flat_namespace -o src/env/mpichversion src/env/mpichversion.o lib/.libs/libmpi.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_mpich /mpich-dragonegg33/work/mpich-3.1.3/src/mpl -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_mpich /mpich-dragonegg33/work/mpich-3.1.3/src/openpa/src -lpthread :info:build Undefined symbols for architecture x86_64: :info:build "_MPI_Abort", referenced from: :info:build _main in mpivars.o :info:build "_MPI_Comm_rank", referenced from: :info:build _main in mpivars.o :info:build "_MPI_Finalize", referenced from: :info:build _main in mpivars.o :info:build "_MPI_Init_thread", referenced from: :info:build _main in mpivars.o }}} -- Ticket URL: <https://trac.macports.org/ticket/46736> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #46746: mpich-dragonegg34 @3.1.3, openmpi-dragonegg34 @1.7.5_3: build has assertion failure from LLVM
by MacPorts 19 Oct '15

19 Oct '15

#46746: mpich-dragonegg34 @3.1.3, openmpi-dragonegg34 @1.7.5_3: build has assertion failure from LLVM -------------------------+------------------------------------------------- Reporter: dstrubbe@… | Owner: jeremyhu@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: llvm-3.4, dragonegg-3.4, mpich- | dragonegg34, openmpi-dragonegg34 -------------------------+------------------------------------------------- MPICH and OpenMPI fail to build with dragonegg 3.4. The error message is: {{{ :info:build Assertion failed: (Index < Length && "Invalid index!"), function operator[], file /opt/local/var/macports/build/_opt_mports_dports_lang_llvm-3.4/llvm-3.4/work/llvm-3.4.2.src/include/llvm/ADT/ArrayRef.h, line 150. :info:build *** WARNING *** there are active plugins, do not report this as a bug unless you can reproduce it without enabling any plugins. :info:build Event | Plugins :info:build PLUGIN_FINISH_UNIT | llvm34gcc46 :info:build PLUGIN_FINISH | llvm34gcc46 :info:build PLUGIN_START_UNIT | llvm34gcc46 :info:build PLUGIN_ALL_IPA_PASSES_END | llvm34gcc46 :info:build src/mpltrmem.c: In function 'MPL_trfree': :info:build src/mpltrmem.c:471:11: internal compiler error: Abort trap: 6 :info:build Please submit a full bug report, :info:build with preprocessed source if appropriate. :info:build See <https://trac.macports.org/newticket> for instructions. :info:build make[2]: *** [src/mpltrmem.lo] Error 1 }}} The problem appears to be from LLVM. I see it has already been reported to upstream from MacPorts for the ffmpeg port by Jeremy: http://lists.cs.uiuc.edu/pipermail/llvmbugs/2013-December/031931.html. However I do not see any other MacPorts ticket so I am creating one. -- Ticket URL: <https://trac.macports.org/ticket/46746> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47381: bsdowl @2.2.1: update to 3.0.0-20150401
by MacPorts 19 Oct '15

19 Oct '15

#47381: bsdowl @2.2.1: update to 3.0.0-20150401 -------------------------+-------------------------------- Reporter: michipili@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: -------------------------+-------------------------------- - https://github.com/michipili/bsdowl/releases/tag/v3.0.0-20150401 Version 3.0.0-20150401 is a pre-release, it is usable and works well but is still not feature complete. IMO it can supersedes actual 2.2.1, but maybe we could be as careful as keeping the v2.2.1 around for a while. -- Ticket URL: <https://trac.macports.org/ticket/47381> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #48391: MacVim update to snapshot 77
by MacPorts 19 Oct '15

19 Oct '15

#48391: MacVim update to snapshot 77 ----------------------+-------------------------------- Reporter: eirnym@… | Owner: macports-tickets@… Type: update | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: MacVim ----------------------+-------------------------------- MacVim updated to shapshot 77, diff to support it. -- Ticket URL: <https://trac.macports.org/ticket/48391> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47816: patch avrdude for ftdi_syncbb fix to bring Programming Enable time delay into spec
by MacPorts 19 Oct '15

19 Oct '15

#47816: patch avrdude for ftdi_syncbb fix to bring Programming Enable time delay into spec --------------------------+-------------------------------- Reporter: beck.dac@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: avrdude ftdi | Port: avrdude --------------------------+-------------------------------- When using the FTDI bit banging programmer, chips will reply to signature requests and even program with -D (disable chip erase). However, when -D is left out and the default action -e (chip erase) occurs, the chip will not reply to a subsequent program enable in time. This happens because the datasheet specified delay (20ms) has not been observed. The current version of avrdude 6.1 only waits for 5 ms. For chips with slow oscillators this is a problem. The attached patch (patch-245r.diff) to be applied to the source corrects this problem as described in this post from avrdude-dev: https://lists.nongnu.org/archive/html/avrdude-dev/2013-09/msg00160.html I have also included a Portfile patch (Portfile-avrdude.diff) that applies the attached patch. -- Ticket URL: <https://trac.macports.org/ticket/47816> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47034: Update CrystFEL version
by MacPorts 18 Oct '15

18 Oct '15

#47034: Update CrystFEL version -----------------------+-------------------------------- Reporter: rkirian@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: haspatch | Port: crystfel -----------------------+-------------------------------- Update CrystFEL to latest version 0.6.0. Also, make gtkdoc an option (variant) since most users do not need code documentation. -- Ticket URL: <https://trac.macports.org/ticket/47034> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #46313: py27-graph-tool @2.2.35_0 still broken after rebuilding
by MacPorts 18 Oct '15

18 Oct '15

#46313: py27-graph-tool @2.2.35_0 still broken after rebuilding -----------------------+-------------------------------- Reporter: ba228jw@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: graph_tool -----------------------+-------------------------------- attempted install of python package graph_tool with brand new install of macports 2.3.3 on OSX 10.10.1 with Xcode 6.1.1 Error: Port py27-graph-tool is still broken after rebuilding it more than 3 times. -- Ticket URL: <https://trac.macports.org/ticket/46313> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #48285: py27-glewpy @0.7.4_9 build failure
by MacPorts 18 Oct '15

18 Oct '15

#48285: py27-glewpy @0.7.4_9 build failure --------------------------------+-------------------------------- Reporter: nicolas.stransky@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: | Port: py27-glewpy --------------------------------+-------------------------------- Mac OS 10.10.4 and Xcode 6.1 trying to install py27-glewpy and getting an error during install. {{{ :info:build running build :info:build running build_py :info:build running build_ext :info:build pyrexc src/glew.pyx --> src/glew.c :info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_python_py- glewpy/py27-glewpy/work/glewpy-0.7.4/src/glew.pyx:32:25: Cannot convert 'src.glew.G Lbyte *' to Python object :info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_python_py- glewpy/py27-glewpy/work/glewpy-0.7.4/src/glew.pyx:38:30: Cannot convert 'src.glew.GLbyte *' to Python object :info:build building 'glew' extension :info:build /usr/bin/clang -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict- prototypes -arch x86_64 -I/opt/local/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/glew.c -o build/temp.macosx-10.10-x86_64-2.7/src/glew.o :info:build src/glew.c:1:2: error: Do not use this file, it is the result of a failed Pyrex compilation. :info:build #error Do not use this file, it is the result of a failed Pyrex compilation. :info:build ^ :info:build 1 error generated. :info:build error: command '/usr/bin/clang' failed with exit status 1 :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_python_py- glewpy/py27-glewpy/work/glewpy-0.7.4" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build :info:build Exit code: 1 :error:build org.macports.build for port py27-glewpy returned: command execution failed :debug:build Error code: CHILDSTATUS 68690 1 :debug:build Backtrace: command execution failed while executing "system -nice 10 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "portbuild::build_main org.macports.build" ("eval" body line 1) invoked from within "eval $procedure $targetname" :info:build Warning: targets not executed for py27-glewpy: org.macports.activate org.macports.build org.macports.destroot org.macports.install :error:build Failed to install py27-glewpy :debug:build Registry error: py27-glewpy not registered as installed & active. invoked from within "registry_active $subport" invoked from within "$workername eval registry_active \$subport" }}} -- Ticket URL: <https://trac.macports.org/ticket/48285> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47252: slime fails to build with "command execution failed"
by MacPorts 18 Oct '15

18 Oct '15

#47252: slime fails to build with "command execution failed" -------------------------+-------------------------------- Reporter: ephemeris@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: slime lisp | Port: slime -------------------------+-------------------------------- I tried cleaning and uninstalling but get the same result each time. $ sudo port install slime ---> Computing dependencies for slime ---> Building slime Error: org.macports.build for port slime returned: command execution failed Please see the log file for port slime for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_lang_slime/slime/main.log -- Ticket URL: <https://trac.macports.org/ticket/47252> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #48910: textmate2: update to 2.0-beta.8
by MacPorts 18 Oct '15

18 Oct '15

#48910: textmate2: update to 2.0-beta.8 --------------------------+----------------------- Reporter: ryandesign@… | Owner: cal@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.99 Keywords: haspatch | Port: textmate2 --------------------------+----------------------- textmate2 can be updated to 2.0-beta.8 with the patches attached. -- Ticket URL: <https://trac.macports.org/ticket/48910> MacPorts <https://www.macports.org/> Ports system for OS X

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