March 2016 - macports-tickets - lists.macosforge.org

[MacPorts] #50467: ansible @2.0.0.2.1_0 Git clone failed - SSL certificate problem: Couldn't understand the server certificate format
by MacPorts 13 May '16

13 May '16

#50467: ansible @2.0.0.2.1_0 Git clone failed - SSL certificate problem: Couldn't understand the server certificate format --------------------+-------------------------------- Reporter: nils@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: ansible --------------------+-------------------------------- Running '''sudo port install ansible''' on my OS X 10.11.3 installation fails with the following lines in the log: {{{ :info:fetch fatal: unable to access 'https://github.com/ansible/ansible.git/': SSL certificate problem: Couldn't understand the server certificate format :info:fetch Command failed: /usr/bin/git clone -q https://github.com/ansible/ansible.git /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_sysutils_ansible/ansible/work/ansible-2.0.0.2-1 2>&1 :info:fetch Exit code: 128 :error:fetch org.macports.fetch for port ansible returned: Git clone failed :debug:fetch Error code: NONE :debug:fetch Backtrace: Git clone failed while executing "gitfetch" (procedure "portfetch::fetch_main" line 14) invoked from within "portfetch::fetch_main org.macports.fetch" ("eval" body line 1) invoked from within "eval $procedure $targetname" }}} I have tried installed the git port and trying again, but that doesn't make a difference. The log mentions using /usr/bin/git either way, so I didn't expect it to. Manually cloning the Ansible Git repository by running '''git clone https://github.com/ansible/ansible.git''' works fine. -- Ticket URL: <https://trac.macports.org/ticket/50467> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50164: wget: build fails on SL buildbot creating man page.
by MacPorts 12 May '16

12 May '16

#50164: wget: build fails on SL buildbot creating man page. ----------------------+-------------------------- Reporter: devans@… | Owner: ryandesign@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: wget ----------------------+-------------------------- Build fails as follows: {{{ ./texi2pod.pl -D VERSION="1.17.1" ./wget.texi wget.pod wget.texi:6: warning: unrecognized encoding name `UTF-8'. /usr/bin/pod2man --center="GNU Wget" --release="GNU Wget 1.17.1" --utf8 wget.pod > wget.1 Unknown option: utf8 make[2]: *** [wget.1] Error 1 }}} See https://build.macports.org/builders/buildports-snowleopard- x86_64/builds/39341/steps/compile/logs/stdio/text -- Ticket URL: <https://trac.macports.org/ticket/50164> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50806: gnuplot on ElCapitan fails due to Symbol not found
by MacPorts 12 May '16

12 May '16

#50806: gnuplot on ElCapitan fails due to Symbol not found -----------------------------------+-------------------------------- Reporter: chlangley@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: _CGLGetCurrentContext | Port: gnuplot -----------------------------------+-------------------------------- Hello: gnuplot port installs but then fails to run complaining of missing links. Here is the story: on OSX 10.11.3 MBP ==================== | => sudo port install gnuplot ---> Computing dependencies for gnuplot ---> Fetching archive for gnuplot ---> Attempting to fetch gnuplot-5.0.3_0+aquaterm+luaterm+pangocairo+wxwidgets+x11.darwin_15.x86_64.tbz2 from http://packages.macports.org/gnuplot ---> Attempting to fetch gnuplot-5.0.3_0+aquaterm+luaterm+pangocairo+wxwidgets+x11.darwin_15.x86_64.tbz2 from http://sea.us.packages.macports.org/macports/packages/gnuplot ---> Attempting to fetch gnuplot-5.0.3_0+aquaterm+luaterm+pangocairo+wxwidgets+x11.darwin_15.x86_64.tbz2 from http://lil.fr.packages.macports.org/gnuplot ---> Fetching distfiles for gnuplot ---> Verifying checksums for gnuplot ---> Extracting gnuplot ---> Applying patches to gnuplot ---> Configuring gnuplot ---> Building gnuplot ---> Staging gnuplot into destroot ---> Installing gnuplot @5.0.3_0+aquaterm+luaterm+pangocairo+wxwidgets+x11 ---> Activating gnuplot @5.0.3_0+aquaterm+luaterm+pangocairo+wxwidgets+x11 ---> Cleaning gnuplot ---> Updating database of binaries ---> Scanning binaries for linking errors ---> No broken files found. ________________________________________________________________________________ | ~ @ rootless6 (chuck) | => gnuplot dyld: Symbol not found: _CGLGetCurrentContext Referenced from: /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo Expected in: /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL in /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo Trace/BPT trap: 5 =========================================== -- Ticket URL: <https://trac.macports.org/ticket/50806> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #48365: Ports should require perl5.22 instead of 5.16
by MacPorts 12 May '16

12 May '16

#48365: Ports should require perl5.22 instead of 5.16 -------------------------+------------------------------------------------- Reporter: mojca@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: ack ackmate amavisd-new archway | argus-monitor auto-multiple-choice backuppc | biblatex-biber bugzilla clearsilver cloc | cpan2port cpuid cssh cutter cvsweb cws2fws-pl | cyrus-imapd dc3dd ddclient demeter demeter- | devel dirvish docbook-utils docbook2X dvdrip | eperl exo (afb) extractopinion flac2mp3 | frozenbubble2 ftpsync fusioninventory-agent | fwknop gdmap ghsum git git-cal glibmm globus- | core gnome-bindings-perl5 gnucash gnucash-devel | gnumeric gnupod grid-packaging-tools gtk-doc | gtkmm GTorrentViewer help2man homebank hugin- | app icon-naming-utils icoutils ikiwiki | imageindex imapsync intltool latexdiff LaTeXML | libbluray liboping-devel libpurple libsigcxx2 | libxmlxx2 log2timeline magicspp mailqfmt | makepasswd mb2md mediaserv metar metasploit2 | mod_perl2 monarch moreutils mosh mtn-browse | munin muttprint myrepos mysql-zrm mythtv- | core.25 mythtv-core.26 mythtv-core.27 | mythweb.25 mythweb.26 mythweb.27 nagios-plugins | nedi net-snmp nfsen nrg openbrowser ossp-uuid | patchutils pcsc-tools pearl pemail | perfect_maildir perlprimer pflogsumm pidgin | po4a postgresql_autodoc postgrey psh PsyncX | pulseaudio rancid rpm rpm52 rpm53 rpm54 rrdtool | rsnapshot sendpage shelldap signing-party | sleuthkit smokeping snmptt snownews | spidereyeballs sqlgrey stow subversion- | perlbindings-5.16 swaks sympa system-tools- | backends t-prot tablet-encode texinfo thieriot | tinyca2 torrentsniff tsung vantages vcheck vit | wakeonlan whois wml xchat-gnome xfce-utils xqf | xserve-raid-tools -------------------------+------------------------------------------------- All ports depending on Perl 5.16 should switch to 5.22. (See also an older ticket #44405.) Below is a list of ports by maintainer as obtained via: {{{ port info --line --index --name --maintainer depends:'perl5\.16' or depends:'p5\.16-' | grep -v 'p5-' | grep -v 'p5.16-' | sort > list.txt }}} No additional checks were done, so it's possible that some of the ports listed below might not require any action. Please note down the names of maintainers in case of "maintainer timeout" as I suspect that there might be some abandoned ports on the list. == No maintainer == * nomaintainer: * GTorrentViewer * ack * ackmate * argus-monitor * backuppc * bugzilla * clearsilver * cssh * cvsweb * cws2fws-pl * cyrus-imapd * dc3dd * flac2mp3 * frozenbubble2 * fusioninventory-agent * gnome-bindings-perl5 * gnupod * homebank * hugin-app * icon-naming-utils * ikiwiki * imageindex * latexdiff * libxmlxx2 * mailqfmt * makepasswd * mb2md * mediaserv * metasploit2 * monarch * mtn-browse * munin * muttprint * nagios-plugins * nedi * nfsen * nrg * ossp-uuid * patchutils * pemail * perfect_maildir * perlprimer * pflogsumm * po4a * postgresql_autodoc * postgrey * psh * rancid * rrdtool * sendpage * shelldap * smokeping * snmptt * snownews * spidereyeballs * stow * swaks * sympa * system-tools-backends * t-prot * tablet-encode * texinfo * torrentsniff * tsung * vantages * vcheck * xchat-gnome * xqf * xserve-raid-tools == Open maintainer: * cal * eperl * signing-party * ciserlohn * git * ctreleaven * mythtv-core.25 * mythtv-core.26 * mythtv-core.27 * mythweb.25 * mythweb.26 * mythweb.27 * devans * glibmm * gnumeric * gtk-doc * gtkmm * intltool * libpurple * libsigcxx2 * pidgin * biblatex-biber * gnucash * gnucash-devel * eborisch * gdmap * g5pw * vit * hum * extractopinion * hum + clear-code.com:kou * cutter * ionic * pulseaudio * jeremyhu * libbluray * jmr * archway * khindenburg * help2man * moreutils * mww * ftpsync * imapsync * pixilla * amavisd-new * sqlgrey * raimue * git-cal * ryandesign * PsyncX * net-snmp * openbrowser * snc * ddclient * cfaerber.name:cfaerber * wml * danner.de:daniel * liboping-devel * m4x.org:db_macports * pcsc-tools * nikhef.nl:dennisvd * globus-core * grid-packaging-tools * gwmail.gwu.edu:egall * cpan2port * googlemail.com:gjasny * myrepos * nist.gov:joe.fowler * demeter * demeter-devel * laposte.net:joel.brogniart * auto-multiple-choice * vt.edu:jpo * cloc * yahoo.fr:jul_bsd * log2timeline * gmail.com:rjvbertin * cpuid * gmail.com:tlockhart1976 * docbook-utils * docbook2X == Maintained ports == * afb * exo (afb) * xfce-utils * afb + mac.com:n3npq * rpm * rpm52 * rpm53 * rpm54 * blair * fwknop * blair + geeklair.net:dluke * subversion-perlbindings-5.16 * mk + jonahb.com:jonah * icoutils * landonf * tinyca2 * mww * rsnapshot * wakeonlan * ryandesign * whois * takeshi * magicspp * nist.gov:bruce.miller * LaTeXML * behanna.org:chris * dirvish * gmail.com:fernando.iazeolla * metar * gmail.com:jessekornblum * sleuthkit * bitwrangler.com:kmayer * mysql-zrm * web.de:marioscheel * dvdrip * mit.edu:quentin * mosh * pu-gh.com:rod * ghsum * pearl * thieriot * cyberscript.net:ryan * mod_perl2 -- Ticket URL: <https://trac.macports.org/ticket/48365> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50707: gdal @2.0.2 Please enable PCRaster format
by MacPorts 12 May '16

12 May '16

#50707: gdal @2.0.2 Please enable PCRaster format -------------------------+-------------------------------- Reporter: o.schmitz@… | Owner: macports-tickets@… Type: enhancement | Status: new Priority: Normal | Milestone: Component: ports | Version: Keywords: | Port: gdal -------------------------+-------------------------------- Can you please enable the PCRaster format (i.e. remove the --without- pcraster in the port file)? It is an internal format in GDAL and has no external dependencies. We (http://www.pcraster.eu) are finalising the OSX support of our software and file format support by the gdal tools is relevant for user's workflows (e.g. with QGIS). Thanks! Oliver -- Ticket URL: <https://trac.macports.org/ticket/50707> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #49905: Error installing py34-parsing
by MacPorts 11 May '16

11 May '16

#49905: Error installing py34-parsing -------------------------------+-------------------------------- Reporter: jianguohsiang82@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: -------------------------------+-------------------------------- I cannot install this port. The main.log file from /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports .org_release_tarballs_ports_python_py-parsing/py34-parsing/main.log is attached below. Thanks. -- Ticket URL: <https://trac.macports.org/ticket/49905> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #47696: PETSc port doesn't compile with +complex
by MacPorts 11 May '16

11 May '16

#47696: PETSc port doesn't compile with +complex -------------------------------+-------------------------------- Reporter: drososkourounis@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.3 Keywords: PETSc+complex | Port: -------------------------------+-------------------------------- Dear developers, I tried to compile slepc-3.5.3 with FEAST support. Unfortunately it reports that FEAST is supported only with complex numbers. {{{ :~/Work/Software/Optimization/FENICS/slepc-3.5.3$ ./configure --prefix=~/Work/Software/Optimization/FENICS/slepc-3.5.3/build --with- feast --with-feast- dir=~/Work/Software/Optimization/FENICS/FEAST/2.1/lib/osx --with-feast- flags='-lfeast_sparse -lfeast' Checking environment... Checking PETSc installation... ERROR: FEAST is supported only with complex numbers. ERROR: See "arch-darwin-c-opt/conf/configure.log" file for details }}} This happens because of the following: {{{ $cat config/feast.py }}} {{{ .......................................................................... def Check(conf,vars,cmake,tmpdir,directory,libs): if petscconf.SCALAR != 'complex': log.Exit('ERROR: FEAST is supported only with complex numbers.') }}} which means that PETSc needs to be compiled with +complex. I tried to compile PETSc this way and unfortunately no options succeeded. {{{ sudo port install petsc(a)3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex -mpich sudo port clean blabla sudo port uninstall blabla sudo port install petsc(a)3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex sudo port install petsc(a)3.5.3_1+accelerate+hypre+parmetis+suitesparse+complex }}} {{{ ~/Work/Software/Optimization/FENICS/slepc-3.5.3$ sudo port install petsc(a)3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex -mpich Password: ---> Computing dependencies for petsc ---> Fetching archive for petsc ---> Attempting to fetch petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/petsc ---> Attempting to fetch petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/petsc ---> Attempting to fetch petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/petsc ---> Fetching distfiles for petsc ---> Verifying checksums for petsc ---> Extracting petsc ---> Applying patches to petsc ---> Configuring petsc Error: org.macports.configure for port petsc returned: configure failure: command execution failed Please see the log file for port petsc for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_petsc/petsc/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port petsc failed But anyone of the above without the +complex works. Below I attach the error log }}} -- Ticket URL: <https://trac.macports.org/ticket/47696> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50950: OpenBLAS @0.2.17_0: "Undefined symbols for architecture x86_64"
by MacPorts 08 May '16

08 May '16

#50950: OpenBLAS @0.2.17_0: "Undefined symbols for architecture x86_64" ----------------------------+-------------------------------- Reporter: mschamschula@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: OpenBLAS ----------------------------+-------------------------------- While building OpenBLAS 0.2.17 under Yosemite, I get a series of "Undefined symbols for architecture x86_64" errors. -- Ticket URL: <https://trac.macports.org/ticket/50950> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50381: ncarg fails to build
by MacPorts 08 May '16

08 May '16

#50381: ncarg fails to build -----------------------+-------------------------------- Reporter: bmoebis@… | Owner: macports-tickets@… Type: defect | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: -----------------------+-------------------------------- version:1 :debug:main Executing org.macports.main (hdfeos) :debug:main Skipping completed org.macports.archivefetch (hdfeos) :debug:main Skipping completed org.macports.fetch (hdfeos) :debug:main Skipping completed org.macports.checksum (hdfeos) :debug:main Skipping completed org.macports.extract (hdfeos) :debug:main Skipping completed org.macports.patch (hdfeos) :debug:main Skipping completed org.macports.configure (hdfeos) :debug:build build phase started at Wed Jan 20 16:43:10 AEDT 2016 :notice:build ---> Building hdfeos :debug:build Executing org.macports.build (hdfeos) :debug:build Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.11' :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos" && /usr/bin/make -j8 -w all' :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos" && /usr/bin/make -j8 -w all :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos' :info:build Making all in gctp :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp' :info:build Making all in src :info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp/src' :info:build make[2]: Nothing to be done for `all'. :info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp/src' :info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp' :info:build make[2]: Nothing to be done for `all-am'. :info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp' :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/gctp' :info:build Making all in src :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/src' :info:build /bin/sh ../libtool --mode=link --tag=CC /opt/local/bin/h4cc -Os -arch x86_64 -I/opt/local/include -Wl,-single_module -o libhdfeos.la -rpath /opt/local/lib EHapi.lo GDapi.lo PTapi.lo SWapi.lo -lmfhdf -ldf -lz -ljpeg -lm :info:build libtool: link: warning: `/usr/local/lib/libsz.la' seems to be moved :info:build libtool: link: warning: `/usr/local/lib/libsz.la' seems to be moved :info:build /opt/local/bin/h4cc -dynamiclib -undefined dynamic_lookup -o .libs/libhdfeos.0.0.0.dylib .libs/EHapi.o .libs/GDapi.o .libs/PTapi.o .libs/SWapi.o /usr/local/lib/libmfhdf.a -L/usr/local/lib /usr/local/lib/libz.dylib /usr/local/lib/libdf.a -lz /usr/local/lib/libjpeg.dylib -lm -arch x86_64 -Wl,-single_module -install_name /opt/local/lib/libhdfeos.0.dylib -Wl,-compatibility_version -Wl,1 -Wl,-current_version -Wl,1.0 :info:build clang: error: no such file or directory: '/usr/local/lib/libjpeg.dylib' :info:build make[1]: *** [libhdfeos.la] Error 1 :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos/src' :info:build make: *** [all-recursive] Error 1 :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos' :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/work/hdfeos" && /usr/bin/make -j8 -w all :info:build Exit code: 2 :error:build org.macports.build for port hdfeos returned: command execution failed :debug:build Error code: CHILDSTATUS 33873 2 :debug:build Backtrace: command execution failed while executing "system -nice 0 $fullcmdstring" ("eval" body line 1) invoked from within "eval system $notty $nice \$fullcmdstring" invoked from within "command_exec build" (procedure "portbuild::build_main" line 8) invoked from within "portbuild::build_main org.macports.build" ("eval" body line 1) invoked from within "eval $procedure $targetname" :info:build Warning: targets not executed for hdfeos: org.macports.activate org.macports.build org.macports.destroot org.macports.install :error:build Failed to install hdfeos :debug:build Registry error: hdfeos5 not registered as installed & active. invoked from within "registry_active $subport" invoked from within "$workername eval registry_active \$subport" :notice:build Please see the log file for port hdfeos for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdfeos/hdfeos/main.log Done with OSX 10.11.2 -- Ticket URL: <https://trac.macports.org/ticket/50381> MacPorts <https://www.macports.org/> Ports system for OS X

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[MacPorts] #50809: py-ttfquery @1.0.1 new Portfile
by MacPorts 07 May '16

07 May '16

#50809: py-ttfquery @1.0.1 new Portfile -------------------------+-------------------------------- Reporter: maugustin@… | Owner: macports-tickets@… Type: submission | Status: new Priority: Normal | Milestone: Component: ports | Version: 2.3.4 Keywords: | Port: py-ttfquery -------------------------+-------------------------------- I've added py-ttfquery I have problems with the download from sourceforge, but with a manual download the install run through. -- Ticket URL: <https://trac.macports.org/ticket/50809> MacPorts <https://www.macports.org/> Ports system for OS X

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